| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301248
Identifier: 146301248
GI number: 146301248
Start: 4181596
End: 4182732
Strand: Reverse
Name: 146301248
Synonym: Fjoh_3506
Alternate gene names: NA
Gene position: 4182732-4181596 (Counterclockwise)
Preceding gene: 146301260
Following gene: 146301247
Centisome position: 68.6
GC content: 33.42
Gene sequence:
>1137_bases ATGAAAAATGCTTTTTTTGTTCTGCTTTTTGTCGTTTTAAGCTCGGGTAACCGTGAAAATGACCATAAAGTAATTCGTTC CTTTTGTTACTGGAAAACTAATCTTTACTTTCAGGAAGAAGACGATTCTCTGGTAAATAAACTAGATGTAAAACACATGT ATGTTCGTTTTTTTGATGTTGATTATAATCCGTACTCAAAAGAACCGCTGCCTGTTGCCACTATTTGGGATATTTCGTTT AATAAAAGCAATCCCGAAATCACACCGAGTATTTTTATAACGAATGAAGTTGTTTTAAAATCAGATACGAAACAGTTAGA CAGTCTGGCAGTCAGGATGGCAAAACGAATCGAACAGATTGGTAAAAAAATGAATGACACAAAAGCTGATATTATAGCTT CGAATATTGTGTACCCAAAAGATTATTATAAGCAGAAAGACTATAAACCTTTAAATTATGATTCAGTAAGAGCAGCAGAA TCAGCCAAATTAAAAGTGGCATTTAAAGAAATTCTAATAGACTGCGACTGGACCGAAAAATCTCAGAAGAATTATTTCTA TTTATTAAAACAAATTAAAAGCCAGCTGCCATCTTCAAAAATAGCAGCAACCATACGACTGTGGCAGTATAAATATGCTT CAAAAGCCGGAATTCCGCCGGTAGATAAGGGTTTGCTGATGTGCTATAATATTACAAAACCAGACGATTTACAGACTAAA AATTCTATTGCAACAAGCGAAGAATTAGCACAATATATTACGCACGGCGATTATAAACTTAAACTAGACATTGCACTGCC ATTATACAGCTGGGCGGTTGCTTTTAGAGGAAATCAGTTTAAAGGTATTTTGTCTGATTATGATCAGTTGATAAAGGATA CAAGTAAAGTAAAGAAAACTTCAGATACCCAATATGTTTTGCAGGATGATGTTTTAGTCGGGCAGACGTATCTTAGAAAT GGTGATGAAATTAGAATTGAGAAAATTTCAGACAGCGAACTTGACAAGATGATTTCGATTATTAAAAACAAAATCCAGAT TGATAATCAGACAAAAGTGACTTTTTTCTCTTTTGATAAAAAATACATAAACGATTATGGAACCGAAAATATCTCCAATT ATTATGCGCGCTTTTAG
Upstream 100 bases:
>100_bases CAAAGGTAAGAATACAAAGCAAAAGTTGTTCATAAATAAATCATATTGTTATAAATTTTAATACTAATTTTGAACTATAT TTTGTAAGTTTTTTATTATC
Downstream 100 bases:
>100_bases CAGTTTACTTTTAGTTTTAAGCGTTCAGTTTTCATTTGCGTGCGGATGGCAGGTTTCTCCTGAAACCAGCCGTTTGGCTT TGTTTAAAGCACAAAGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MKNAFFVLLFVVLSSGNRENDHKVIRSFCYWKTNLYFQEEDDSLVNKLDVKHMYVRFFDVDYNPYSKEPLPVATIWDISF NKSNPEITPSIFITNEVVLKSDTKQLDSLAVRMAKRIEQIGKKMNDTKADIIASNIVYPKDYYKQKDYKPLNYDSVRAAE SAKLKVAFKEILIDCDWTEKSQKNYFYLLKQIKSQLPSSKIAATIRLWQYKYASKAGIPPVDKGLLMCYNITKPDDLQTK NSIATSEELAQYITHGDYKLKLDIALPLYSWAVAFRGNQFKGILSDYDQLIKDTSKVKKTSDTQYVLQDDVLVGQTYLRN GDEIRIEKISDSELDKMISIIKNKIQIDNQTKVTFFSFDKKYINDYGTENISNYYARF
Sequences:
>Translated_378_residues MKNAFFVLLFVVLSSGNRENDHKVIRSFCYWKTNLYFQEEDDSLVNKLDVKHMYVRFFDVDYNPYSKEPLPVATIWDISF NKSNPEITPSIFITNEVVLKSDTKQLDSLAVRMAKRIEQIGKKMNDTKADIIASNIVYPKDYYKQKDYKPLNYDSVRAAE SAKLKVAFKEILIDCDWTEKSQKNYFYLLKQIKSQLPSSKIAATIRLWQYKYASKAGIPPVDKGLLMCYNITKPDDLQTK NSIATSEELAQYITHGDYKLKLDIALPLYSWAVAFRGNQFKGILSDYDQLIKDTSKVKKTSDTQYVLQDDVLVGQTYLRN GDEIRIEKISDSELDKMISIIKNKIQIDNQTKVTFFSFDKKYINDYGTENISNYYARF >Mature_378_residues MKNAFFVLLFVVLSSGNRENDHKVIRSFCYWKTNLYFQEEDDSLVNKLDVKHMYVRFFDVDYNPYSKEPLPVATIWDISF NKSNPEITPSIFITNEVVLKSDTKQLDSLAVRMAKRIEQIGKKMNDTKADIIASNIVYPKDYYKQKDYKPLNYDSVRAAE SAKLKVAFKEILIDCDWTEKSQKNYFYLLKQIKSQLPSSKIAATIRLWQYKYASKAGIPPVDKGLLMCYNITKPDDLQTK NSIATSEELAQYITHGDYKLKLDIALPLYSWAVAFRGNQFKGILSDYDQLIKDTSKVKKTSDTQYVLQDDVLVGQTYLRN GDEIRIEKISDSELDKMISIIKNKIQIDNQTKVTFFSFDKKYINDYGTENISNYYARF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43976; Mature: 43976
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNAFFVLLFVVLSSGNRENDHKVIRSFCYWKTNLYFQEEDDSLVNKLDVKHMYVRFFDV CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHEEEEEEEEEC DYNPYSKEPLPVATIWDISFNKSNPEITPSIFITNEVVLKSDTKQLDSLAVRMAKRIEQI CCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECEEEECCCHHHHHHHHHHHHHHHHHH GKKMNDTKADIIASNIVYPKDYYKQKDYKPLNYDSVRAAESAKLKVAFKEILIDCDWTEK HHHCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHCCCCHHEEEEHHHEEECCCCCC SQKNYFYLLKQIKSQLPSSKIAATIRLWQYKYASKAGIPPVDKGLLMCYNITKPDDLQTK CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC NSIATSEELAQYITHGDYKLKLDIALPLYSWAVAFRGNQFKGILSDYDQLIKDTSKVKKT CCCCCHHHHHHHHHCCCEEEEEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC SDTQYVLQDDVLVGQTYLRNGDEIRIEKISDSELDKMISIIKNKIQIDNQTKVTFFSFDK CCCEEEEECCEEECHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHEECCCCEEEEEECCH KYINDYGTENISNYYARF HHHHHCCCCCHHHHHHCC >Mature Secondary Structure MKNAFFVLLFVVLSSGNRENDHKVIRSFCYWKTNLYFQEEDDSLVNKLDVKHMYVRFFDV CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHEEEEEEEEEC DYNPYSKEPLPVATIWDISFNKSNPEITPSIFITNEVVLKSDTKQLDSLAVRMAKRIEQI CCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECEEEECCCHHHHHHHHHHHHHHHHHH GKKMNDTKADIIASNIVYPKDYYKQKDYKPLNYDSVRAAESAKLKVAFKEILIDCDWTEK HHHCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHCCCCHHEEEEHHHEEECCCCCC SQKNYFYLLKQIKSQLPSSKIAATIRLWQYKYASKAGIPPVDKGLLMCYNITKPDDLQTK CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC NSIATSEELAQYITHGDYKLKLDIALPLYSWAVAFRGNQFKGILSDYDQLIKDTSKVKKT CCCCCHHHHHHHHHCCCEEEEEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC SDTQYVLQDDVLVGQTYLRNGDEIRIEKISDSELDKMISIIKNKIQIDNQTKVTFFSFDK CCCEEEEECCEEECHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHEECCCCEEEEEECCH KYINDYGTENISNYYARF HHHHHCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA