| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301241
Identifier: 146301241
GI number: 146301241
Start: 4174408
End: 4175529
Strand: Direct
Name: 146301241
Synonym: Fjoh_3499
Alternate gene names: NA
Gene position: 4174408-4175529 (Clockwise)
Preceding gene: 146301240
Following gene: 146301242
Centisome position: 68.47
GC content: 31.64
Gene sequence:
>1122_bases ATGAAAAACATCATTACCCAATTCTCCCGATTATTTGTCGGTGTATTATTTATCATTTCCGGATTAATTAAATTGAACGA CCCGGTAGGTTTCTCTTACAAGCTTACAGAGTATTTTAGTGAACCTGTTTTCAATATGCCTTTTTTAGAGCCGTTTACAC TAAGTATGGCTATTGTTCTGGTAATATTAGAAGTAGTTTTAGGAGTAATGTTATTAGTAGGCTATAAAGCCACACAAACA ATTTGGGCTCTATTGCTTCTAATTGTTTTCTTTACTTTCCTTACCTTCTATTCTGCTTATTTTGATGTAGTAAAAGATTG CGGCTGTTTTGGTGATGCCTTACATTTAACACCTTGGCAGTCATTCACAAAAGACGTAGTTTTATTATTCTTCATTTTGA TTTTATTCTTCAACCAAAAACTGATAAAACCTTTATTTTCAACTTCAAAAACGAATTTTGCAGTTTATCTTAGTGTAATT TTATCTGCATTAATGGCATATTGGGTTATAAATCATAATCCTATAAAAGATTTCCGTCCGTATAAAGTTGGAAATAATAT TGAAAAAGGAATGGAAATTCCTGAAGGTGCGCCAAAGTCAGTTGTTGAAATGATTTTCATTTACAAAGTAAACGGAGTTG ACAAAGAGTTTACCGAAAAAGATTTAATGAATATTCCAGAAGGCGCAACGTTTGTAGATAGAAAAGACAAAGTTATTTCA GAAGGTTATGTACCGCCAATTCATGATTTTACAATGACAAAAGATGATTCTGATTATAAAGATGAATTATTAAAAGAACC AAAATTATTAGTTTTTGTAACGTATGATCTAACTAAATCTGACCCAGCCGGAATGAAAAAACTGGCTAAAGTTACTGCAG ATGCAAAAGCTAAAGGTTACAAAGTTATTGCTATGACTGCATCTGGAGCTGATGAAATCGCAAAAGCAAAAAAAGAGTAT AACTTAGATGTTGATTTCTATTTCTGCGATGCTACAACTTTAAAAACAATCGAAAGAGCAAATCCTAGTATTGTTGTAAT ACAAAAAGGAACTGTTGTTCAAAAACTACATTACAACGATGTTGATGATTTAAAACTATCGGATGTTGCGTATAGTCTAT AA
Upstream 100 bases:
>100_bases TTTAATCCTAAATCCTATAAATAAATAGAAATTCCTCCCGACAGCTATCGGGACTAAATTCCAAGTTTAATATTGGAATT TGAATATTTAAATATTACTT
Downstream 100 bases:
>100_bases TTAATACCATTATAAAATTCAAAAAAGCTGCAATTTAAATTGCAGCTTTTTTTTTACTTAATTTTATATTTTTGCAGATT CAAATTAAACGAATGAAGCA
Product: DoxX family protein
Products: NA
Alternate protein names: DoxX Family Protein; Doxx Family Protein
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MKNIITQFSRLFVGVLFIISGLIKLNDPVGFSYKLTEYFSEPVFNMPFLEPFTLSMAIVLVILEVVLGVMLLVGYKATQT IWALLLLIVFFTFLTFYSAYFDVVKDCGCFGDALHLTPWQSFTKDVVLLFFILILFFNQKLIKPLFSTSKTNFAVYLSVI LSALMAYWVINHNPIKDFRPYKVGNNIEKGMEIPEGAPKSVVEMIFIYKVNGVDKEFTEKDLMNIPEGATFVDRKDKVIS EGYVPPIHDFTMTKDDSDYKDELLKEPKLLVFVTYDLTKSDPAGMKKLAKVTADAKAKGYKVIAMTASGADEIAKAKKEY NLDVDFYFCDATTLKTIERANPSIVVIQKGTVVQKLHYNDVDDLKLSDVAYSL
Sequences:
>Translated_373_residues MKNIITQFSRLFVGVLFIISGLIKLNDPVGFSYKLTEYFSEPVFNMPFLEPFTLSMAIVLVILEVVLGVMLLVGYKATQT IWALLLLIVFFTFLTFYSAYFDVVKDCGCFGDALHLTPWQSFTKDVVLLFFILILFFNQKLIKPLFSTSKTNFAVYLSVI LSALMAYWVINHNPIKDFRPYKVGNNIEKGMEIPEGAPKSVVEMIFIYKVNGVDKEFTEKDLMNIPEGATFVDRKDKVIS EGYVPPIHDFTMTKDDSDYKDELLKEPKLLVFVTYDLTKSDPAGMKKLAKVTADAKAKGYKVIAMTASGADEIAKAKKEY NLDVDFYFCDATTLKTIERANPSIVVIQKGTVVQKLHYNDVDDLKLSDVAYSL >Mature_373_residues MKNIITQFSRLFVGVLFIISGLIKLNDPVGFSYKLTEYFSEPVFNMPFLEPFTLSMAIVLVILEVVLGVMLLVGYKATQT IWALLLLIVFFTFLTFYSAYFDVVKDCGCFGDALHLTPWQSFTKDVVLLFFILILFFNQKLIKPLFSTSKTNFAVYLSVI LSALMAYWVINHNPIKDFRPYKVGNNIEKGMEIPEGAPKSVVEMIFIYKVNGVDKEFTEKDLMNIPEGATFVDRKDKVIS EGYVPPIHDFTMTKDDSDYKDELLKEPKLLVFVTYDLTKSDPAGMKKLAKVTADAKAKGYKVIAMTASGADEIAKAKKEY NLDVDFYFCDATTLKTIERANPSIVVIQKGTVVQKLHYNDVDDLKLSDVAYSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42214; Mature: 42214
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIITQFSRLFVGVLFIISGLIKLNDPVGFSYKLTEYFSEPVFNMPFLEPFTLSMAIVL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCCCCHHHHHHHHHH VILEVVLGVMLLVGYKATQTIWALLLLIVFFTFLTFYSAYFDVVKDCGCFGDALHLTPWQ HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH SFTKDVVLLFFILILFFNQKLIKPLFSTSKTNFAVYLSVILSALMAYWVINHNPIKDFRP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC YKVGNNIEKGMEIPEGAPKSVVEMIFIYKVNGVDKEFTEKDLMNIPEGATFVDRKDKVIS CCCCCCHHHCCCCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHH EGYVPPIHDFTMTKDDSDYKDELLKEPKLLVFVTYDLTKSDPAGMKKLAKVTADAKAKGY CCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCE KVIAMTASGADEIAKAKKEYNLDVDFYFCDATTLKTIERANPSIVVIQKGTVVQKLHYND EEEEEECCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCEEEEECCCEEEEECCCC VDDLKLSDVAYSL CCCCCHHHHHHCC >Mature Secondary Structure MKNIITQFSRLFVGVLFIISGLIKLNDPVGFSYKLTEYFSEPVFNMPFLEPFTLSMAIVL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCCCCHHHHHHHHHH VILEVVLGVMLLVGYKATQTIWALLLLIVFFTFLTFYSAYFDVVKDCGCFGDALHLTPWQ HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH SFTKDVVLLFFILILFFNQKLIKPLFSTSKTNFAVYLSVILSALMAYWVINHNPIKDFRP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC YKVGNNIEKGMEIPEGAPKSVVEMIFIYKVNGVDKEFTEKDLMNIPEGATFVDRKDKVIS CCCCCCHHHCCCCCCCCHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHH EGYVPPIHDFTMTKDDSDYKDELLKEPKLLVFVTYDLTKSDPAGMKKLAKVTADAKAKGY CCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCE KVIAMTASGADEIAKAKKEYNLDVDFYFCDATTLKTIERANPSIVVIQKGTVVQKLHYND EEEEEECCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCEEEEECCCEEEEECCCC VDDLKLSDVAYSL CCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA