| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301240
Identifier: 146301240
GI number: 146301240
Start: 4173793
End: 4174335
Strand: Direct
Name: 146301240
Synonym: Fjoh_3498
Alternate gene names: NA
Gene position: 4173793-4174335 (Clockwise)
Preceding gene: 146301237
Following gene: 146301241
Centisome position: 68.46
GC content: 34.62
Gene sequence:
>543_bases ATGAAGAATACTTCCCAAGAGTTTGATAATGTAATCGAGGTTTGCCGAACCCTGTTTATCAATAAAATGAAAGACTATGG CAGTGCGTGGAGAATTTTAAGACTGCCGTCGCTGACAGATCAGATTTTTATAAAAGCACAACGAATTAGAAGTTTACAGG AAAACGAAGTCCGTAAAGTTGACGAAGACGAAAAAGGAGAATTTATCGGAATCATCAATTATTCTATCATGGCTTTGATT CAGCTTGAATTAGGCGTTGTAGAGCAGCCGGATTTGGATGTTGAAAAAGCAACTGAATTATACGATGCTAAAGTAAAATT GACCAAAGATTTAATGGAAGCTAAAAATCACGATTACGGCGAAGCCTGGCGCGATATGCGAGTAAGTTCATTAACTGATT TGATTCTTCAAAAACTGCTTCGCGTAAAACAAATTGAAGATAATAAAGGAAAAACAATTGTATCTGAAGGAATCGATGCT AATTATCAGGATATGATTAATTATTCTGTTTTTGCTTTAATCCTAAATCCTATAAATAAATAG
Upstream 100 bases:
>100_bases TTGTTTAGAAAAAACTTGAAACAAAGCGAACCGTAAACTTGAAACTCTTAAAAAATTATCCTTATTTTTGAAGAAATTTT AGCAAATATACAGCATATAA
Downstream 100 bases:
>100_bases AAATTCCTCCCGACAGCTATCGGGACTAAATTCCAAGTTTAATATTGGAATTTGAATATTTAAATATTACTTATGAAAAA CATCATTACCCAATTCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MKNTSQEFDNVIEVCRTLFINKMKDYGSAWRILRLPSLTDQIFIKAQRIRSLQENEVRKVDEDEKGEFIGIINYSIMALI QLELGVVEQPDLDVEKATELYDAKVKLTKDLMEAKNHDYGEAWRDMRVSSLTDLILQKLLRVKQIEDNKGKTIVSEGIDA NYQDMINYSVFALILNPINK
Sequences:
>Translated_180_residues MKNTSQEFDNVIEVCRTLFINKMKDYGSAWRILRLPSLTDQIFIKAQRIRSLQENEVRKVDEDEKGEFIGIINYSIMALI QLELGVVEQPDLDVEKATELYDAKVKLTKDLMEAKNHDYGEAWRDMRVSSLTDLILQKLLRVKQIEDNKGKTIVSEGIDA NYQDMINYSVFALILNPINK >Mature_180_residues MKNTSQEFDNVIEVCRTLFINKMKDYGSAWRILRLPSLTDQIFIKAQRIRSLQENEVRKVDEDEKGEFIGIINYSIMALI QLELGVVEQPDLDVEKATELYDAKVKLTKDLMEAKNHDYGEAWRDMRVSSLTDLILQKLLRVKQIEDNKGKTIVSEGIDA NYQDMINYSVFALILNPINK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20859; Mature: 20859
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTSQEFDNVIEVCRTLFINKMKDYGSAWRILRLPSLTDQIFIKAQRIRSLQENEVRKV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC DEDEKGEFIGIINYSIMALIQLELGVVEQPDLDVEKATELYDAKVKLTKDLMEAKNHDYG CCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH EAWRDMRVSSLTDLILQKLLRVKQIEDNKGKTIVSEGIDANYQDMINYSVFALILNPINK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNTSQEFDNVIEVCRTLFINKMKDYGSAWRILRLPSLTDQIFIKAQRIRSLQENEVRKV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC DEDEKGEFIGIINYSIMALIQLELGVVEQPDLDVEKATELYDAKVKLTKDLMEAKNHDYG CCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH EAWRDMRVSSLTDLILQKLLRVKQIEDNKGKTIVSEGIDANYQDMINYSVFALILNPINK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA