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The map label for this gene is yfkH [H]

Identifier: 146301229

GI number: 146301229

Start: 4164402

End: 4165325

Strand: Reverse

Name: yfkH [H]

Synonym: Fjoh_3487

Alternate gene names: 146301229

Gene position: 4165325-4164402 (Counterclockwise)

Preceding gene: 146301230

Following gene: 146301228

Centisome position: 68.32

GC content: 30.74

Gene sequence:

>924_bases
ATGTCGAAAGAAATAGAGGATCGGATTGAAAAACTGCCCGTAATACGCAACGCAGCCCGACTTTTAAAAAGAATAAAGCT
CCCTTGGTTAGAGGGATTTTCTTTGTATGATTTACTTGAAATGTACACTTTAGGGATTCTTGAAGGTGCTTTTTCATATC
ATGCAAGCGCTGTTTCTTTCAGCTTTTTTATGGCTTTATTTCCTTTTGCTTTATTTATTTTAAACTTAATTCCGTTTATT
CCGATAGATAATTTTCAGGAAGATTTCCTGCAGTTTGTACAGCAGAGTGTTCCTCCAAATACGTATGATGCTATTAGTAA
AATTATCAGTGATATTTTAAATAATAGTCACTCGGGCTTATTATCGTCGGGTTTTTTACTTTCTATTTTTTTGATGGCAA
ATGGTATTAACGGAATTTTAAGCGGTTTTGAATCGTCTAAACACGTTTTTGATAAGAGAGGTTTTTTTAGACAATATTTG
GTTGCTTTGGCTATTTCACTCGTTATGACTGTAATTTTGTTTGTAACTGTGGCTACAATTGTAGTTTTTGAGGTTTTCAT
TCAAAAAACAATTATTCAGGATGTATTAAGCGATCGTATTCCACTGATTATTTTAGGGCGATATTTATTCGTTATTCTGA
TGATTTTGATAACATCTTCAATATTATTACGTTATGGTACAAAACAGTACAATAAAGTGCCTTTTATCAGCATTGGTTCT
GTTTTTACAACGGTCTTAATTGTTATATCTTCGTTCTTTTTTGGCATTTGGGTTATAAAATTCTCAAAATATAACGAACT
TTATGGTTCAATTGGAACATTATTAATTCTAATGTTTTATATTTGGATAAACTGTATGATTCTGCTTTTAGGGTTCGAAT
TGAATGCTTCTATCAGAAAATTAAAACAAAAAAAAGAAAAATAA

Upstream 100 bases:

>100_bases
CTGTATATAATATGGATTTGAGCTTGAAAGCCTTTTAAATTGTTAATTATAAATTATCAGTTATTAATTAAAAATCTAAG
AAGTCTAAAAACCTAAGTTT

Downstream 100 bases:

>100_bases
TATGAAAAATTTGATGCTAACTATCGGAGTGTTCTTCTTTGCGCTGACCATGCAAAGTCAAAGTGTAATTGGAAAATGGA
AAACCATTGATGATGAAACT

Product: putative ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSKEIEDRIEKLPVIRNAARLLKRIKLPWLEGFSLYDLLEMYTLGILEGAFSYHASAVSFSFFMALFPFALFILNLIPFI
PIDNFQEDFLQFVQQSVPPNTYDAISKIISDILNNSHSGLLSSGFLLSIFLMANGINGILSGFESSKHVFDKRGFFRQYL
VALAISLVMTVILFVTVATIVVFEVFIQKTIIQDVLSDRIPLIILGRYLFVILMILITSSILLRYGTKQYNKVPFISIGS
VFTTVLIVISSFFFGIWVIKFSKYNELYGSIGTLLILMFYIWINCMILLLGFELNASIRKLKQKKEK

Sequences:

>Translated_307_residues
MSKEIEDRIEKLPVIRNAARLLKRIKLPWLEGFSLYDLLEMYTLGILEGAFSYHASAVSFSFFMALFPFALFILNLIPFI
PIDNFQEDFLQFVQQSVPPNTYDAISKIISDILNNSHSGLLSSGFLLSIFLMANGINGILSGFESSKHVFDKRGFFRQYL
VALAISLVMTVILFVTVATIVVFEVFIQKTIIQDVLSDRIPLIILGRYLFVILMILITSSILLRYGTKQYNKVPFISIGS
VFTTVLIVISSFFFGIWVIKFSKYNELYGSIGTLLILMFYIWINCMILLLGFELNASIRKLKQKKEK
>Mature_306_residues
SKEIEDRIEKLPVIRNAARLLKRIKLPWLEGFSLYDLLEMYTLGILEGAFSYHASAVSFSFFMALFPFALFILNLIPFIP
IDNFQEDFLQFVQQSVPPNTYDAISKIISDILNNSHSGLLSSGFLLSIFLMANGINGILSGFESSKHVFDKRGFFRQYLV
ALAISLVMTVILFVTVATIVVFEVFIQKTIIQDVLSDRIPLIILGRYLFVILMILITSSILLRYGTKQYNKVPFISIGSV
FTTVLIVISSFFFGIWVIKFSKYNELYGSIGTLLILMFYIWINCMILLLGFELNASIRKLKQKKEK

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 35062; Mature: 34931

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKEIEDRIEKLPVIRNAARLLKRIKLPWLEGFSLYDLLEMYTLGILEGAFSYHASAVSF
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFFMALFPFALFILNLIPFIPIDNFQEDFLQFVQQSVPPNTYDAISKIISDILNNSHSGL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCH
LSSGFLLSIFLMANGINGILSGFESSKHVFDKRGFFRQYLVALAISLVMTVILFVTVATI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFEVFIQKTIIQDVLSDRIPLIILGRYLFVILMILITSSILLRYGTKQYNKVPFISIGS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEHHH
VFTTVLIVISSFFFGIWVIKFSKYNELYGSIGTLLILMFYIWINCMILLLGFELNASIRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LKQKKEK
HHHHCCC
>Mature Secondary Structure 
SKEIEDRIEKLPVIRNAARLLKRIKLPWLEGFSLYDLLEMYTLGILEGAFSYHASAVSF
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFFMALFPFALFILNLIPFIPIDNFQEDFLQFVQQSVPPNTYDAISKIISDILNNSHSGL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCH
LSSGFLLSIFLMANGINGILSGFESSKHVFDKRGFFRQYLVALAISLVMTVILFVTVATI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVFEVFIQKTIIQDVLSDRIPLIILGRYLFVILMILITSSILLRYGTKQYNKVPFISIGS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEHHH
VFTTVLIVISSFFFGIWVIKFSKYNELYGSIGTLLILMFYIWINCMILLLGFELNASIRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LKQKKEK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]