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The map label for this gene is yehT [C]

Identifier: 146301225

GI number: 146301225

Start: 4160042

End: 4160737

Strand: Direct

Name: yehT [C]

Synonym: Fjoh_3483

Alternate gene names: 146301225

Gene position: 4160042-4160737 (Clockwise)

Preceding gene: 146301215

Following gene: 146301231

Centisome position: 68.23

GC content: 30.6

Gene sequence:

>696_bases
ATGAAACTAAACTGTGTTGTTGTAGATGATAGTTCTATACAGAGGACAATTATTGCAAAATTAGTTAATAATCACCCAGG
TTTGCACTTAATCGGGGATTTTTCTAATGCAATAGAAGCAAAAAGTTGTATCTCACTTAATAATATCGATTTAATATTTC
TTGATATAGAAATGCCGGTTATTAACGGCTTTGATTTTCTTGATGGTTTAAAATCTAAACCGCAGATTATATTTATTACT
TCTAAAGCCGAATATGCTTTAAAAGCTTTTGATTATGATGCTGCTGATTATCTGCAGAAACCAATTGCTGTGGACCGTTT
TAATGCTTCTGTAAAAAGAGCAATTGATATGCATTTACTGAAAAAAGAAGTTAAAGAAGAAGAAGGAGAGCATATTTTTA
TAAAAAGCAACCTTAAAAAACTTAAAATTTTCACTGCAAAAATCAAATGGATTGAAGCTTTTGGGGATTATGTGAGAGTA
GTTACTGAAGACGACAGTAACCTGGTACTTTCGACTATGAAATCTTTTGAAAATGATTTATCAAAAGACAAGTTCATACG
CGTTCACAAATCATATATTATTAATATTGATAAAGTTGAACGTTTCAATAGTAAATTTGCCGAAATCGGCATCACTAAAA
TTCCGCTTAGCCGAAATAAAAAAGAAGATTTAGTAAAAGCTTTGTCAACGTCGTAA

Upstream 100 bases:

>100_bases
TTCGTCATAATGCAAAAAATATGCGCTCATTTTAGTTTTTTTTCCAAAAAAATAATACATTTACTACTGCTATCCTGAAT
TTATTCTAAATTTAAATGTT

Downstream 100 bases:

>100_bases
TTTTAATAAAAATCGACATTTACAACCACTTTTATAGCTCTGTACTGAGCAACAGCTTCAAAACTATTCAACATTTTCTG
AATAGTTTTTTTTGTATTAC

Product: LytTR family two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKLNCVVVDDSSIQRTIIAKLVNNHPGLHLIGDFSNAIEAKSCISLNNIDLIFLDIEMPVINGFDFLDGLKSKPQIIFIT
SKAEYALKAFDYDAADYLQKPIAVDRFNASVKRAIDMHLLKKEVKEEEGEHIFIKSNLKKLKIFTAKIKWIEAFGDYVRV
VTEDDSNLVLSTMKSFENDLSKDKFIRVHKSYIINIDKVERFNSKFAEIGITKIPLSRNKKEDLVKALSTS

Sequences:

>Translated_231_residues
MKLNCVVVDDSSIQRTIIAKLVNNHPGLHLIGDFSNAIEAKSCISLNNIDLIFLDIEMPVINGFDFLDGLKSKPQIIFIT
SKAEYALKAFDYDAADYLQKPIAVDRFNASVKRAIDMHLLKKEVKEEEGEHIFIKSNLKKLKIFTAKIKWIEAFGDYVRV
VTEDDSNLVLSTMKSFENDLSKDKFIRVHKSYIINIDKVERFNSKFAEIGITKIPLSRNKKEDLVKALSTS
>Mature_231_residues
MKLNCVVVDDSSIQRTIIAKLVNNHPGLHLIGDFSNAIEAKSCISLNNIDLIFLDIEMPVINGFDFLDGLKSKPQIIFIT
SKAEYALKAFDYDAADYLQKPIAVDRFNASVKRAIDMHLLKKEVKEEEGEHIFIKSNLKKLKIFTAKIKWIEAFGDYVRV
VTEDDSNLVLSTMKSFENDLSKDKFIRVHKSYIINIDKVERFNSKFAEIGITKIPLSRNKKEDLVKALSTS

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=248, Percent_Identity=27.0161290322581, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788724, Length=235, Percent_Identity=22.5531914893617, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788192, Length=106, Percent_Identity=30.188679245283, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 26301; Mature: 26301

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNCVVVDDSSIQRTIIAKLVNNHPGLHLIGDFSNAIEAKSCISLNNIDLIFLDIEMPV
CEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHEEECCCEEEEEEEECCE
INGFDFLDGLKSKPQIIFITSKAEYALKAFDYDAADYLQKPIAVDRFNASVKRAIDMHLL
ECCCHHHHCCCCCCEEEEEECCCCEEHEECCCCHHHHHHCCCCHHHCCHHHHHHHHHHHH
KKEVKEEEGEHIFIKSNLKKLKIFTAKIKWIEAFGDYVRVVTEDDSNLVLSTMKSFENDL
HHHHHHCCCCEEEEECCCEEEEEEHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHC
SKDKFIRVHKSYIINIDKVERFNSKFAEIGITKIPLSRNKKEDLVKALSTS
CHHHHEEEEHHHEEEHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKLNCVVVDDSSIQRTIIAKLVNNHPGLHLIGDFSNAIEAKSCISLNNIDLIFLDIEMPV
CEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHEEECCCEEEEEEEECCE
INGFDFLDGLKSKPQIIFITSKAEYALKAFDYDAADYLQKPIAVDRFNASVKRAIDMHLL
ECCCHHHHCCCCCCEEEEEECCCCEEHEECCCCHHHHHHCCCCHHHCCHHHHHHHHHHHH
KKEVKEEEGEHIFIKSNLKKLKIFTAKIKWIEAFGDYVRVVTEDDSNLVLSTMKSFENDL
HHHHHHCCCCEEEEECCCEEEEEEHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHC
SKDKFIRVHKSYIINIDKVERFNSKFAEIGITKIPLSRNKKEDLVKALSTS
CHHHHEEEEHHHEEEHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]