| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301186
Identifier: 146301186
GI number: 146301186
Start: 4111532
End: 4112173
Strand: Direct
Name: 146301186
Synonym: Fjoh_3444
Alternate gene names: NA
Gene position: 4111532-4112173 (Clockwise)
Preceding gene: 146301185
Following gene: 146301187
Centisome position: 67.44
GC content: 35.67
Gene sequence:
>642_bases ATGAAAAAGTACTTAATTCTACTTATTGTAATTCTGTCACTTTCAAGCTGCGGCAGTAATACAACTATTGTAAACAGCTG GAGAGATCCAAAAATAACAGTTGCTCAGGAACATTTTAAAAAAGTCTTAGTAGTTGCTCTCGTTAAAGACGAAGCTTCAA GAAGAATTGCCGAAAACAGAATCGCTGCAAGCAATCCTATTTTTAAAACTTCCTATCAATATCTAAACGAAACTACCAAA CAGCTTACGCAGGAACAAAAATTAAAAATCCTTCAAGATGAAAATTTTGACGGGGTTGTCACGATGCGTTTAGTAAGTAC TGAAAAAGAAACTACTTACGTTCCAGGAAGTTATACAGGAATGTATTACGGAGGCTTTGATGGTTTATATTCCGGAATGT ACGGATACGGTTTTGGAAACTGGTACGGAATGTATTCACCGGCTTTCTACGATCCAGGATATTATCAGGAAACAACTTAT TACATGGTAGAAACCAATATTTTTTCGCTAAAAGAAAACAAATTAATCTGGACCGGAACCACAAGATCTGATTACGTAAC AGATGTAGGACAAACTGTAGATGCTATAATGCAGGCAGTTGTAAAAGAAATGAGAAAAGACGGTTCATTACCTCCAAAAT AA
Upstream 100 bases:
>100_bases GAATTAAAAAAGCATATAACTAAACACGGATTTAATTACTTAAATCTGTGTTTATCAAAATTTTATAGTTATTTTTACTA CAAACATATAACTGTAAAAT
Downstream 100 bases:
>100_bases CCTAAATAAAAAGCAGCTCAAATGCTGCTTTTTTTACGATTAAATAAATGACTAATTTTGTCAAGATTTTAAATTTCATC AAAAATGAGATCACTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKKYLILLIVILSLSSCGSNTTIVNSWRDPKITVAQEHFKKVLVVALVKDEASRRIAENRIAASNPIFKTSYQYLNETTK QLTQEQKLKILQDENFDGVVTMRLVSTEKETTYVPGSYTGMYYGGFDGLYSGMYGYGFGNWYGMYSPAFYDPGYYQETTY YMVETNIFSLKENKLIWTGTTRSDYVTDVGQTVDAIMQAVVKEMRKDGSLPPK
Sequences:
>Translated_213_residues MKKYLILLIVILSLSSCGSNTTIVNSWRDPKITVAQEHFKKVLVVALVKDEASRRIAENRIAASNPIFKTSYQYLNETTK QLTQEQKLKILQDENFDGVVTMRLVSTEKETTYVPGSYTGMYYGGFDGLYSGMYGYGFGNWYGMYSPAFYDPGYYQETTY YMVETNIFSLKENKLIWTGTTRSDYVTDVGQTVDAIMQAVVKEMRKDGSLPPK >Mature_213_residues MKKYLILLIVILSLSSCGSNTTIVNSWRDPKITVAQEHFKKVLVVALVKDEASRRIAENRIAASNPIFKTSYQYLNETTK QLTQEQKLKILQDENFDGVVTMRLVSTEKETTYVPGSYTGMYYGGFDGLYSGMYGYGFGNWYGMYSPAFYDPGYYQETTY YMVETNIFSLKENKLIWTGTTRSDYVTDVGQTVDAIMQAVVKEMRKDGSLPPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24273; Mature: 24273
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYLILLIVILSLSSCGSNTTIVNSWRDPKITVAQEHFKKVLVVALVKDEASRRIAENR CCHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH IAASNPIFKTSYQYLNETTKQLTQEQKLKILQDENFDGVVTMRLVSTEKETTYVPGSYTG HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEECCCCCCE MYYGGFDGLYSGMYGYGFGNWYGMYSPAFYDPGYYQETTYYMVETNIFSLKENKLIWTGT EEECCHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCEEEEECC TRSDYVTDVGQTVDAIMQAVVKEMRKDGSLPPK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKYLILLIVILSLSSCGSNTTIVNSWRDPKITVAQEHFKKVLVVALVKDEASRRIAENR CCHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH IAASNPIFKTSYQYLNETTKQLTQEQKLKILQDENFDGVVTMRLVSTEKETTYVPGSYTG HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEECCCCCCE MYYGGFDGLYSGMYGYGFGNWYGMYSPAFYDPGYYQETTYYMVETNIFSLKENKLIWTGT EEECCHHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCEEEEECC TRSDYVTDVGQTVDAIMQAVVKEMRKDGSLPPK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA