| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301182
Identifier: 146301182
GI number: 146301182
Start: 4109345
End: 4109899
Strand: Direct
Name: 146301182
Synonym: Fjoh_3440
Alternate gene names: NA
Gene position: 4109345-4109899 (Clockwise)
Preceding gene: 146301181
Following gene: 146301185
Centisome position: 67.4
GC content: 35.14
Gene sequence:
>555_bases ATGAAAAAAATATTCGCCCTTACCGTTCTTCTTATATCTATTCAATTACAAAGTCAGACTTTTATCAAATTTAATGGTGT AACAGCTTTAGTTGGCGTACCAAATATTGGAGTTGAAACCAGTATTGGTGAAAAAACAACTTTTAGTTTTGACGTTATGG CTTCTTTTTGGGAATCATTTGATGGTCATTCTCCTATGAAATTTTATACGGCAACTCCAGAAATCCGTTACCATTTTAAA GAAAAATACAATGGTTTTTATGTCGGAGGTCATGTCGGTGCAGATAAGTATGAACTTCAAAAATGGAATTACTGGGACAG TAACAAATATGAAGATGGTTTTGGTTATAGACTAGGTGCTACAGTTGGTTATAATGTAAAACTCAGCGATAAATTTTTAC TTGATATTTTTGTTGGCGGCGGCTGGCACCAAGGTTTTTATCATGGATATTATAATGATGGTACTCCCGGAAGATATGAA AAAGCCCCTAACTACAATAAAAGTGGCGAATGGCTTCCGTACCGCGGGGGTGTGATGATTTCTTATAAATTGTAA
Upstream 100 bases:
>100_bases CCAAAATAATCCTGTTAAAAGTCCGTTAATCTTTAATACTAAGGCCTTAGTTGAGTTATATTTGCCCCAAAATAAATTAT TCCCTGCGATTTAAAATACC
Downstream 100 bases:
>100_bases ATCAGCTGAATTTAGGAAGTGATTTTATATACAAATCTTCCACTTTCTTTCTTGCCCAATCTGTTTTTCTTAAAAAAGTA AGACTCGATTTCACGCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MKKIFALTVLLISIQLQSQTFIKFNGVTALVGVPNIGVETSIGEKTTFSFDVMASFWESFDGHSPMKFYTATPEIRYHFK EKYNGFYVGGHVGADKYELQKWNYWDSNKYEDGFGYRLGATVGYNVKLSDKFLLDIFVGGGWHQGFYHGYYNDGTPGRYE KAPNYNKSGEWLPYRGGVMISYKL
Sequences:
>Translated_184_residues MKKIFALTVLLISIQLQSQTFIKFNGVTALVGVPNIGVETSIGEKTTFSFDVMASFWESFDGHSPMKFYTATPEIRYHFK EKYNGFYVGGHVGADKYELQKWNYWDSNKYEDGFGYRLGATVGYNVKLSDKFLLDIFVGGGWHQGFYHGYYNDGTPGRYE KAPNYNKSGEWLPYRGGVMISYKL >Mature_184_residues MKKIFALTVLLISIQLQSQTFIKFNGVTALVGVPNIGVETSIGEKTTFSFDVMASFWESFDGHSPMKFYTATPEIRYHFK EKYNGFYVGGHVGADKYELQKWNYWDSNKYEDGFGYRLGATVGYNVKLSDKFLLDIFVGGGWHQGFYHGYYNDGTPGRYE KAPNYNKSGEWLPYRGGVMISYKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21056; Mature: 21056
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFALTVLLISIQLQSQTFIKFNGVTALVGVPNIGVETSIGEKTTFSFDVMASFWESF CCHHHEEEEEEEEEEECCCEEEEECCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHC DGHSPMKFYTATPEIRYHFKEKYNGFYVGGHVGADKYELQKWNYWDSNKYEDGFGYRLGA CCCCCEEEEECCCCEEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEECC TVGYNVKLSDKFLLDIFVGGGWHQGFYHGYYNDGTPGRYEKAPNYNKSGEWLPYRGGVMI EEEEEEEECCEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCEEE SYKL EEEC >Mature Secondary Structure MKKIFALTVLLISIQLQSQTFIKFNGVTALVGVPNIGVETSIGEKTTFSFDVMASFWESF CCHHHEEEEEEEEEEECCCEEEEECCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHC DGHSPMKFYTATPEIRYHFKEKYNGFYVGGHVGADKYELQKWNYWDSNKYEDGFGYRLGA CCCCCEEEEECCCCEEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCEEECC TVGYNVKLSDKFLLDIFVGGGWHQGFYHGYYNDGTPGRYEKAPNYNKSGEWLPYRGGVMI EEEEEEEECCEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCEEE SYKL EEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA