Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301160

Identifier: 146301160

GI number: 146301160

Start: 4083961

End: 4084371

Strand: Reverse

Name: 146301160

Synonym: Fjoh_3418

Alternate gene names: NA

Gene position: 4084371-4083961 (Counterclockwise)

Preceding gene: 146301161

Following gene: 146301159

Centisome position: 66.99

GC content: 28.95

Gene sequence:

>411_bases
ATGAAAAGTTTTAGATTAAAATTATCTTTAGTAGTATTATTTTTATCAATTGGATTTATTTCTTGCAGTAGTGATGATGA
CAAAGTAGAATCGACAGTAAAAACAAAAACAGCATTTGTAACCGAGATTAAAGGTTCAGCAACTGGAAAAGTAAATGAAG
AATTAAGTTATGATATAACTTTTGTTGTAGATAATGCTTGCGGAGAATTTGATAAAATTACAGAAACGACAATTGGCTCA
GATAAAGGATTGCAAGTTGTAGCAAAATATCTATCAGATGTTTGCACACAACAAGTGCCAGATCCTAAAAAAACTGTTTA
TAAATTTAAGTCGAGTGCAAAAGGAACTTTCGAAATTAAATTCAGAAAATCAAAAACAGAATTCCTTACCCAAAAAGTAG
TGATTGAATAA

Upstream 100 bases:

>100_bases
GTTGTTTAATGATTAGTTGAAATTTTTTAACATTTTTTATAAGCAACCTTTGCAACCAAGCGAAGTCTTCATAGTAATTA
ACAATTAATTATTATTTTAT

Downstream 100 bases:

>100_bases
TACCAAGCTTAGTTTATTTGTTTAGATTGACAGCCATTTTACAGCGATTTTAATCCATGTAAAATGGCTTTGTTTTTAGA
TTGATATAAATTATTTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKSFRLKLSLVVLFLSIGFISCSSDDDKVESTVKTKTAFVTEIKGSATGKVNEELSYDITFVVDNACGEFDKITETTIGS
DKGLQVVAKYLSDVCTQQVPDPKKTVYKFKSSAKGTFEIKFRKSKTEFLTQKVVIE

Sequences:

>Translated_136_residues
MKSFRLKLSLVVLFLSIGFISCSSDDDKVESTVKTKTAFVTEIKGSATGKVNEELSYDITFVVDNACGEFDKITETTIGS
DKGLQVVAKYLSDVCTQQVPDPKKTVYKFKSSAKGTFEIKFRKSKTEFLTQKVVIE
>Mature_136_residues
MKSFRLKLSLVVLFLSIGFISCSSDDDKVESTVKTKTAFVTEIKGSATGKVNEELSYDITFVVDNACGEFDKITETTIGS
DKGLQVVAKYLSDVCTQQVPDPKKTVYKFKSSAKGTFEIKFRKSKTEFLTQKVVIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15101; Mature: 15101

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFRLKLSLVVLFLSIGFISCSSDDDKVESTVKTKTAFVTEIKGSATGKVNEELSYDIT
CCCHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEE
FVVDNACGEFDKITETTIGSDKGLQVVAKYLSDVCTQQVPDPKKTVYKFKSSAKGTFEIK
EEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEE
FRKSKTEFLTQKVVIE
EECCHHHHHHHHHCCC
>Mature Secondary Structure
MKSFRLKLSLVVLFLSIGFISCSSDDDKVESTVKTKTAFVTEIKGSATGKVNEELSYDIT
CCCHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEE
FVVDNACGEFDKITETTIGSDKGLQVVAKYLSDVCTQQVPDPKKTVYKFKSSAKGTFEIK
EEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEE
FRKSKTEFLTQKVVIE
EECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA