| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301159
Identifier: 146301159
GI number: 146301159
Start: 4083375
End: 4083791
Strand: Reverse
Name: 146301159
Synonym: Fjoh_3417
Alternate gene names: NA
Gene position: 4083791-4083375 (Counterclockwise)
Preceding gene: 146301160
Following gene: 146301158
Centisome position: 66.98
GC content: 34.29
Gene sequence:
>417_bases ATGAGAATTTTTAGAATACAATCAGTTTTAGCAATGCTATTTTTAGCGGTTTCTTTTGTTGCTTGCAGCAGTGATGATAA TAACGGAAATGAAACGCCTCAAACTATTTCAAGAGCTGTAAATGTTACTGCTATCTCGGGACCAGCTACAGGTAAGATTG GAGTTGATATTAATTATGATATATCTTTTATAGTAGATAATGCTTGCGGTCAATTTGATCGAATTAGCAATATTTCAATC GGTAAAGAGGAAGGGTTTCAAGTTGAAGCGAAATATCCAATCGGGACTTGCGCTAACGAAACACCAACTGCTTTACATAC CGTTTATACCTTTTCACCACAGTCAAAAGGAACTTTTGAGATTAAATTCAAAAAATCGGAGACAGAATTTTTAGTTAAGA CATTGGTTATTCAGTAA
Upstream 100 bases:
>100_bases TTGTTTTTAGATTGATATAAATTATTTGCATTATTTGAAGCAACCTTTGTAATTTAGCACCATCTAGATAATATAGATAG AACAAATTAATCAATTTTAT
Downstream 100 bases:
>100_bases TTTTTTAATAATAATATTATATAAAAAAACTGCAGTAAAAAATAGTAGTAGTAAGGTAAAATAAGAGGGCTTTTTTAAAG CTCTTTTTTTGATCATAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MRIFRIQSVLAMLFLAVSFVACSSDDNNGNETPQTISRAVNVTAISGPATGKIGVDINYDISFIVDNACGQFDRISNISI GKEEGFQVEAKYPIGTCANETPTALHTVYTFSPQSKGTFEIKFKKSETEFLVKTLVIQ
Sequences:
>Translated_138_residues MRIFRIQSVLAMLFLAVSFVACSSDDNNGNETPQTISRAVNVTAISGPATGKIGVDINYDISFIVDNACGQFDRISNISI GKEEGFQVEAKYPIGTCANETPTALHTVYTFSPQSKGTFEIKFKKSETEFLVKTLVIQ >Mature_138_residues MRIFRIQSVLAMLFLAVSFVACSSDDNNGNETPQTISRAVNVTAISGPATGKIGVDINYDISFIVDNACGQFDRISNISI GKEEGFQVEAKYPIGTCANETPTALHTVYTFSPQSKGTFEIKFKKSETEFLVKTLVIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15065; Mature: 15065
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFRIQSVLAMLFLAVSFVACSSDDNNGNETPQTISRAVNVTAISGPATGKIGVDINYD CEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHEEEEEECCCCCCEEEEEECCC ISFIVDNACGQFDRISNISIGKEEGFQVEAKYPIGTCANETPTALHTVYTFSPQSKGTFE EEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCEEE IKFKKSETEFLVKTLVIQ EEEECCCHHHHHHHHHCC >Mature Secondary Structure MRIFRIQSVLAMLFLAVSFVACSSDDNNGNETPQTISRAVNVTAISGPATGKIGVDINYD CEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHEEEEEECCCCCCEEEEEECCC ISFIVDNACGQFDRISNISIGKEEGFQVEAKYPIGTCANETPTALHTVYTFSPQSKGTFE EEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCEEE IKFKKSETEFLVKTLVIQ EEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA