Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301159

Identifier: 146301159

GI number: 146301159

Start: 4083375

End: 4083791

Strand: Reverse

Name: 146301159

Synonym: Fjoh_3417

Alternate gene names: NA

Gene position: 4083791-4083375 (Counterclockwise)

Preceding gene: 146301160

Following gene: 146301158

Centisome position: 66.98

GC content: 34.29

Gene sequence:

>417_bases
ATGAGAATTTTTAGAATACAATCAGTTTTAGCAATGCTATTTTTAGCGGTTTCTTTTGTTGCTTGCAGCAGTGATGATAA
TAACGGAAATGAAACGCCTCAAACTATTTCAAGAGCTGTAAATGTTACTGCTATCTCGGGACCAGCTACAGGTAAGATTG
GAGTTGATATTAATTATGATATATCTTTTATAGTAGATAATGCTTGCGGTCAATTTGATCGAATTAGCAATATTTCAATC
GGTAAAGAGGAAGGGTTTCAAGTTGAAGCGAAATATCCAATCGGGACTTGCGCTAACGAAACACCAACTGCTTTACATAC
CGTTTATACCTTTTCACCACAGTCAAAAGGAACTTTTGAGATTAAATTCAAAAAATCGGAGACAGAATTTTTAGTTAAGA
CATTGGTTATTCAGTAA

Upstream 100 bases:

>100_bases
TTGTTTTTAGATTGATATAAATTATTTGCATTATTTGAAGCAACCTTTGTAATTTAGCACCATCTAGATAATATAGATAG
AACAAATTAATCAATTTTAT

Downstream 100 bases:

>100_bases
TTTTTTAATAATAATATTATATAAAAAAACTGCAGTAAAAAATAGTAGTAGTAAGGTAAAATAAGAGGGCTTTTTTAAAG
CTCTTTTTTTGATCATAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRIFRIQSVLAMLFLAVSFVACSSDDNNGNETPQTISRAVNVTAISGPATGKIGVDINYDISFIVDNACGQFDRISNISI
GKEEGFQVEAKYPIGTCANETPTALHTVYTFSPQSKGTFEIKFKKSETEFLVKTLVIQ

Sequences:

>Translated_138_residues
MRIFRIQSVLAMLFLAVSFVACSSDDNNGNETPQTISRAVNVTAISGPATGKIGVDINYDISFIVDNACGQFDRISNISI
GKEEGFQVEAKYPIGTCANETPTALHTVYTFSPQSKGTFEIKFKKSETEFLVKTLVIQ
>Mature_138_residues
MRIFRIQSVLAMLFLAVSFVACSSDDNNGNETPQTISRAVNVTAISGPATGKIGVDINYDISFIVDNACGQFDRISNISI
GKEEGFQVEAKYPIGTCANETPTALHTVYTFSPQSKGTFEIKFKKSETEFLVKTLVIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15065; Mature: 15065

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIFRIQSVLAMLFLAVSFVACSSDDNNGNETPQTISRAVNVTAISGPATGKIGVDINYD
CEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHEEEEEECCCCCCEEEEEECCC
ISFIVDNACGQFDRISNISIGKEEGFQVEAKYPIGTCANETPTALHTVYTFSPQSKGTFE
EEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCEEE
IKFKKSETEFLVKTLVIQ
EEEECCCHHHHHHHHHCC
>Mature Secondary Structure
MRIFRIQSVLAMLFLAVSFVACSSDDNNGNETPQTISRAVNVTAISGPATGKIGVDINYD
CEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHEEEEEECCCCCCEEEEEECCC
ISFIVDNACGQFDRISNISIGKEEGFQVEAKYPIGTCANETPTALHTVYTFSPQSKGTFE
EEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCEEE
IKFKKSETEFLVKTLVIQ
EEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA