| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301129
Identifier: 146301129
GI number: 146301129
Start: 4045489
End: 4046619
Strand: Reverse
Name: 146301129
Synonym: Fjoh_3387
Alternate gene names: NA
Gene position: 4046619-4045489 (Counterclockwise)
Preceding gene: 146301130
Following gene: 146301125
Centisome position: 66.37
GC content: 34.13
Gene sequence:
>1131_bases ATGAGTTCAGTTTCAGTTGACATTCAACCAAAAAATCACTATGAAATTTTAGATGGACTTCGAGGAGTTGCCGCTGTATT GGTTGTAATTTTCCACATTTTCGAAGCTTTTAATGAAGGAAGCCGTTTTAAACAAATTATGAATCACGGTTATCTTGCCG TAGACTTCTTTTTTCTTCTCTCCGGATTTGTTGTAGCATACGCCTATGATGACCGCTGGAGTAAGTTAACCCAATGGGAG TTTTACAAACGACGCTTAATCCGCTTACAGCCCATGGTAATTATGGGAATGATAATTGGAGCCATTTTTTATTATTTTCA AGAATCAAGTGTTTTTCCGCAAATAGCAACAATGCCCGTTTGGAAGTTATTATTAACAATGGTAATTGGTTTTACACTGC TTCCAATTCCGCCGTCAATGGAAATTAGAGGCTGGGGAGAAATGCATCCTTTAAATGGTCCGGCATGGTCACTTTTTTTT GAATATATTGCTAACATCTTGTACGCCCTAATTTTTCGCAAATTTTCAAATAAAGTACTATCAGTATTCGTATTGATATT TGCCGGACTTTTAATAAACTATACTGTATTTGGGCCAAAAGGAGATGTAATTGGCGGATGGTCGTTAAATCTGGAACAAA TGAATGTGGGTTTCACTCGTTTATTATATCCATTTTTTGCTGGGGTTCTGCTTTCTCGTTTAGGAAAACTAATTCATATT AAAGGTGCTTTCTGGATTTGCAGTATTATGATTGTAGTTATATTCTGGATGCCAAGATTTGGTGATGAAAATACTTTATG GATGAACGGTTTATATGAATCTTTTAGTATTATTTTTTTATTCCCGTTAATTGTTGCCATTGGTGCAGGAGGCGAAATTA AAAATCCAATTTCACTTAAAATATGTAAAGCCTTAGGAGATATTTCATATCCTATTTACATAATACATTATCCATTAATT TATTGGTATATGGGCTGGGTTATTGAAAATAAAGTTCCATTAAAAGACGGTTATCTATTAGGAATCGGTGTTTTATTTGC CAGCATAACTATTGCCTATCTATGTTTAAAATTATATGATGAACCGGTTCGTAACTGGCTTCAGAATAAATTTCAAAAAA GAAGGAGTTAA
Upstream 100 bases:
>100_bases CTGTAAAAACATCTTCCGGACCAGCGAAGATCAGAATGGCTTAAAATCACCAGTAAAAACAATTATAACTAACTATTAAC CATTAATAATTAACCATTTT
Downstream 100 bases:
>100_bases GTTTAGGTTCAAAGGTTCAAAGGGAAAAACTTTGTCCCTCTGAACCTCACTAAAAATATTGAATTTCTTAATTTTGTTAG TTATGAAATTTCAAAAAAGG
Product: acyltransferase 3
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSSVSVDIQPKNHYEILDGLRGVAAVLVVIFHIFEAFNEGSRFKQIMNHGYLAVDFFFLLSGFVVAYAYDDRWSKLTQWE FYKRRLIRLQPMVIMGMIIGAIFYYFQESSVFPQIATMPVWKLLLTMVIGFTLLPIPPSMEIRGWGEMHPLNGPAWSLFF EYIANILYALIFRKFSNKVLSVFVLIFAGLLINYTVFGPKGDVIGGWSLNLEQMNVGFTRLLYPFFAGVLLSRLGKLIHI KGAFWICSIMIVVIFWMPRFGDENTLWMNGLYESFSIIFLFPLIVAIGAGGEIKNPISLKICKALGDISYPIYIIHYPLI YWYMGWVIENKVPLKDGYLLGIGVLFASITIAYLCLKLYDEPVRNWLQNKFQKRRS
Sequences:
>Translated_376_residues MSSVSVDIQPKNHYEILDGLRGVAAVLVVIFHIFEAFNEGSRFKQIMNHGYLAVDFFFLLSGFVVAYAYDDRWSKLTQWE FYKRRLIRLQPMVIMGMIIGAIFYYFQESSVFPQIATMPVWKLLLTMVIGFTLLPIPPSMEIRGWGEMHPLNGPAWSLFF EYIANILYALIFRKFSNKVLSVFVLIFAGLLINYTVFGPKGDVIGGWSLNLEQMNVGFTRLLYPFFAGVLLSRLGKLIHI KGAFWICSIMIVVIFWMPRFGDENTLWMNGLYESFSIIFLFPLIVAIGAGGEIKNPISLKICKALGDISYPIYIIHYPLI YWYMGWVIENKVPLKDGYLLGIGVLFASITIAYLCLKLYDEPVRNWLQNKFQKRRS >Mature_375_residues SSVSVDIQPKNHYEILDGLRGVAAVLVVIFHIFEAFNEGSRFKQIMNHGYLAVDFFFLLSGFVVAYAYDDRWSKLTQWEF YKRRLIRLQPMVIMGMIIGAIFYYFQESSVFPQIATMPVWKLLLTMVIGFTLLPIPPSMEIRGWGEMHPLNGPAWSLFFE YIANILYALIFRKFSNKVLSVFVLIFAGLLINYTVFGPKGDVIGGWSLNLEQMNVGFTRLLYPFFAGVLLSRLGKLIHIK GAFWICSIMIVVIFWMPRFGDENTLWMNGLYESFSIIFLFPLIVAIGAGGEIKNPISLKICKALGDISYPIYIIHYPLIY WYMGWVIENKVPLKDGYLLGIGVLFASITIAYLCLKLYDEPVRNWLQNKFQKRRS
Specific function: Seems to regulate the surface properties of the bacterium in the presence of plant cells or plant cell extracts [H]
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cell membrane (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43334; Mature: 43203
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVSVDIQPKNHYEILDGLRGVAAVLVVIFHIFEAFNEGSRFKQIMNHGYLAVDFFFLL CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH SGFVVAYAYDDRWSKLTQWEFYKRRLIRLQPMVIMGMIIGAIFYYFQESSVFPQIATMPV HHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH WKLLLTMVIGFTLLPIPPSMEIRGWGEMHPLNGPAWSLFFEYIANILYALIFRKFSNKVL HHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SVFVLIFAGLLINYTVFGPKGDVIGGWSLNLEQMNVGFTRLLYPFFAGVLLSRLGKLIHI HHHHHHHHHHHHHHEEECCCCCEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCHHEEE KGAFWICSIMIVVIFWMPRFGDENTLWMNGLYESFSIIFLFPLIVAIGAGGEIKNPISLK CHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH ICKALGDISYPIYIIHYPLIYWYMGWVIENKVPLKDGYLLGIGVLFASITIAYLCLKLYD HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EPVRNWLQNKFQKRRS HHHHHHHHHHHHHHCC >Mature Secondary Structure SSVSVDIQPKNHYEILDGLRGVAAVLVVIFHIFEAFNEGSRFKQIMNHGYLAVDFFFLL CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH SGFVVAYAYDDRWSKLTQWEFYKRRLIRLQPMVIMGMIIGAIFYYFQESSVFPQIATMPV HHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH WKLLLTMVIGFTLLPIPPSMEIRGWGEMHPLNGPAWSLFFEYIANILYALIFRKFSNKVL HHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SVFVLIFAGLLINYTVFGPKGDVIGGWSLNLEQMNVGFTRLLYPFFAGVLLSRLGKLIHI HHHHHHHHHHHHHHEEECCCCCEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCHHEEE KGAFWICSIMIVVIFWMPRFGDENTLWMNGLYESFSIIFLFPLIVAIGAGGEIKNPISLK CHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH ICKALGDISYPIYIIHYPLIYWYMGWVIENKVPLKDGYLLGIGVLFASITIAYLCLKLYD HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EPVRNWLQNKFQKRRS HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1860822 [H]