| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yneN [H]
Identifier: 146301125
GI number: 146301125
Start: 4041631
End: 4042125
Strand: Reverse
Name: yneN [H]
Synonym: Fjoh_3383
Alternate gene names: 146301125
Gene position: 4042125-4041631 (Counterclockwise)
Preceding gene: 146301129
Following gene: 146301124
Centisome position: 66.3
GC content: 34.55
Gene sequence:
>495_bases ATGAAAAAAACATTACTTGTTTTAGGATTTTTATGTTGTGTAATTACCAGTTCAAAAGCGCAGGTAGTAGGTACTGACAT TGGTGATATTGCGCCAGAAATTGATCTCCCTGATACAAAAGGAAACAACGAGGTGCTTTCGTCTTTAAGAGGTTCTTTGA CTTTGATCGATTTTTGGGCTTCATGGTGCGGACCATGTATTAAAGAACAGCCTTTACTGCAAAAATTATATGCAGCTTAT CCTGATAAATTTTCTATTTACAGCGTTTCTATGGATACTAAAAAGCCTTTGTGGTTAGCTGCAATTGCCAAAGGAAAATT ACCGTGGATACAAGTAAGTGATTTAAAATACTGGAAGTCTCCGGTTGTAGGTGATTATATGCTTCAATCTGTTCCGTTGA ATTTTTTAGTAGACAAAAACGGAATTATTATAGCTAAAAATATTCACGGAAAAGAGTTAGAAGATAAGGTTAATAGTCTG CTTGCAATACAATAA
Upstream 100 bases:
>100_bases AGAGAATCATGGAGCAAAAAGATGGAATATTTAATGAAGAAATTTATATTTGTGAACGTTATAATTTAATAATCCCCAAA TAAATTAAACTTAATAAATT
Downstream 100 bases:
>100_bases ATTTATTTCAGATTTTTCTTAATTTTAATTTCGGGTGAAAAGAAAACTTTGTAAATTTCACATTTAAAAATTAAATCATG ATGCAAAAATCAATCTTATT
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKKTLLVLGFLCCVITSSKAQVVGTDIGDIAPEIDLPDTKGNNEVLSSLRGSLTLIDFWASWCGPCIKEQPLLQKLYAAY PDKFSIYSVSMDTKKPLWLAAIAKGKLPWIQVSDLKYWKSPVVGDYMLQSVPLNFLVDKNGIIIAKNIHGKELEDKVNSL LAIQ
Sequences:
>Translated_164_residues MKKTLLVLGFLCCVITSSKAQVVGTDIGDIAPEIDLPDTKGNNEVLSSLRGSLTLIDFWASWCGPCIKEQPLLQKLYAAY PDKFSIYSVSMDTKKPLWLAAIAKGKLPWIQVSDLKYWKSPVVGDYMLQSVPLNFLVDKNGIIIAKNIHGKELEDKVNSL LAIQ >Mature_164_residues MKKTLLVLGFLCCVITSSKAQVVGTDIGDIAPEIDLPDTKGNNEVLSSLRGSLTLIDFWASWCGPCIKEQPLLQKLYAAY PDKFSIYSVSMDTKKPLWLAAIAKGKLPWIQVSDLKYWKSPVVGDYMLQSVPLNFLVDKNGIIIAKNIHGKELEDKVNSL LAIQ
Specific function: Participates In Various Redox Reactions Through The Reversible Oxidation Of Its Active Center Dithiol To A Disulfide And Catalyzes Dithiol-Disulfide Exchange Reactions. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 18155; Mature: 18155
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLLVLGFLCCVITSSKAQVVGTDIGDIAPEIDLPDTKGNNEVLSSLRGSLTLIDFWA CCHHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHH SWCGPCIKEQPLLQKLYAAYPDKFSIYSVSMDTKKPLWLAAIAKGKLPWIQVSDLKYWKS HHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCEEEECCCHHHCC PVVGDYMLQSVPLNFLVDKNGIIIAKNIHGKELEDKVNSLLAIQ CCHHHHHHHHCCEEEEECCCCEEEEECCCCCHHHHHHHHHEECC >Mature Secondary Structure MKKTLLVLGFLCCVITSSKAQVVGTDIGDIAPEIDLPDTKGNNEVLSSLRGSLTLIDFWA CCHHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHH SWCGPCIKEQPLLQKLYAAYPDKFSIYSVSMDTKKPLWLAAIAKGKLPWIQVSDLKYWKS HHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCEEEECCCHHHCC PVVGDYMLQSVPLNFLVDKNGIIIAKNIHGKELEDKVNSLLAIQ CCHHHHHHHHCCEEEEECCCCEEEEECCCCCHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]