Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is yneN [H]

Identifier: 146301125

GI number: 146301125

Start: 4041631

End: 4042125

Strand: Reverse

Name: yneN [H]

Synonym: Fjoh_3383

Alternate gene names: 146301125

Gene position: 4042125-4041631 (Counterclockwise)

Preceding gene: 146301129

Following gene: 146301124

Centisome position: 66.3

GC content: 34.55

Gene sequence:

>495_bases
ATGAAAAAAACATTACTTGTTTTAGGATTTTTATGTTGTGTAATTACCAGTTCAAAAGCGCAGGTAGTAGGTACTGACAT
TGGTGATATTGCGCCAGAAATTGATCTCCCTGATACAAAAGGAAACAACGAGGTGCTTTCGTCTTTAAGAGGTTCTTTGA
CTTTGATCGATTTTTGGGCTTCATGGTGCGGACCATGTATTAAAGAACAGCCTTTACTGCAAAAATTATATGCAGCTTAT
CCTGATAAATTTTCTATTTACAGCGTTTCTATGGATACTAAAAAGCCTTTGTGGTTAGCTGCAATTGCCAAAGGAAAATT
ACCGTGGATACAAGTAAGTGATTTAAAATACTGGAAGTCTCCGGTTGTAGGTGATTATATGCTTCAATCTGTTCCGTTGA
ATTTTTTAGTAGACAAAAACGGAATTATTATAGCTAAAAATATTCACGGAAAAGAGTTAGAAGATAAGGTTAATAGTCTG
CTTGCAATACAATAA

Upstream 100 bases:

>100_bases
AGAGAATCATGGAGCAAAAAGATGGAATATTTAATGAAGAAATTTATATTTGTGAACGTTATAATTTAATAATCCCCAAA
TAAATTAAACTTAATAAATT

Downstream 100 bases:

>100_bases
ATTTATTTCAGATTTTTCTTAATTTTAATTTCGGGTGAAAAGAAAACTTTGTAAATTTCACATTTAAAAATTAAATCATG
ATGCAAAAATCAATCTTATT

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKKTLLVLGFLCCVITSSKAQVVGTDIGDIAPEIDLPDTKGNNEVLSSLRGSLTLIDFWASWCGPCIKEQPLLQKLYAAY
PDKFSIYSVSMDTKKPLWLAAIAKGKLPWIQVSDLKYWKSPVVGDYMLQSVPLNFLVDKNGIIIAKNIHGKELEDKVNSL
LAIQ

Sequences:

>Translated_164_residues
MKKTLLVLGFLCCVITSSKAQVVGTDIGDIAPEIDLPDTKGNNEVLSSLRGSLTLIDFWASWCGPCIKEQPLLQKLYAAY
PDKFSIYSVSMDTKKPLWLAAIAKGKLPWIQVSDLKYWKSPVVGDYMLQSVPLNFLVDKNGIIIAKNIHGKELEDKVNSL
LAIQ
>Mature_164_residues
MKKTLLVLGFLCCVITSSKAQVVGTDIGDIAPEIDLPDTKGNNEVLSSLRGSLTLIDFWASWCGPCIKEQPLLQKLYAAY
PDKFSIYSVSMDTKKPLWLAAIAKGKLPWIQVSDLKYWKSPVVGDYMLQSVPLNFLVDKNGIIIAKNIHGKELEDKVNSL
LAIQ

Specific function: Participates In Various Redox Reactions Through The Reversible Oxidation Of Its Active Center Dithiol To A Disulfide And Catalyzes Dithiol-Disulfide Exchange Reactions. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 18155; Mature: 18155

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLVLGFLCCVITSSKAQVVGTDIGDIAPEIDLPDTKGNNEVLSSLRGSLTLIDFWA
CCHHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHH
SWCGPCIKEQPLLQKLYAAYPDKFSIYSVSMDTKKPLWLAAIAKGKLPWIQVSDLKYWKS
HHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCEEEECCCHHHCC
PVVGDYMLQSVPLNFLVDKNGIIIAKNIHGKELEDKVNSLLAIQ
CCHHHHHHHHCCEEEEECCCCEEEEECCCCCHHHHHHHHHEECC
>Mature Secondary Structure
MKKTLLVLGFLCCVITSSKAQVVGTDIGDIAPEIDLPDTKGNNEVLSSLRGSLTLIDFWA
CCHHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHH
SWCGPCIKEQPLLQKLYAAYPDKFSIYSVSMDTKKPLWLAAIAKGKLPWIQVSDLKYWKS
HHHCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCEEEECCCHHHCC
PVVGDYMLQSVPLNFLVDKNGIIIAKNIHGKELEDKVNSLLAIQ
CCHHHHHHHHCCEEEEECCCCEEEEECCCCCHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]