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The map label for this gene is ybzH [H]

Identifier: 146301126

GI number: 146301126

Start: 4042298

End: 4042600

Strand: Direct

Name: ybzH [H]

Synonym: Fjoh_3384

Alternate gene names: 146301126

Gene position: 4042298-4042600 (Clockwise)

Preceding gene: 146301123

Following gene: 146301127

Centisome position: 66.3

GC content: 39.93

Gene sequence:

>303_bases
ATGGAAAATATAGAAATTTTTAAGGCACTCTCTAACAAGTCCAGACTTCAAATGCTGGAATGGCTGAAGGAACCCGAAAT
AAACTTTCCCGGCCAGCTCGAACACGGCGGATTTGAACACGGAGTATGTGTGGGTCAAATTCAAGCTAAGGCAGGTTTGA
CACAATCTACAGTATCTGAATACTTGTCTATTTTACAACGCGCCGGTTTTATCGAAGCCAAACGTGTTGGACAATGGACT
TATTATAAACGTAACGAAGGTGCCTTTGAAGCACTCAGTAAATTAATTCAATCTAATTTGTAA

Upstream 100 bases:

>100_bases
ATTCCATCTTTTTGCTCCATGATTCTCTCCTCTGTCATAAAATTATGCTAAAAACATTTTGCTTAATTGATATATCGGGA
AAAGTCGATATATTTGCATC

Downstream 100 bases:

>100_bases
ATTACTATGAGCACAAACAACCTGTTTTCTCCGTTTAACCTAAAAACGTTAAACTTAAAAAACCGAATCGTAATGGCGCC
TATGACGCGCTCATTTTCTC

Product: regulatory protein ArsR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MENIEIFKALSNKSRLQMLEWLKEPEINFPGQLEHGGFEHGVCVGQIQAKAGLTQSTVSEYLSILQRAGFIEAKRVGQWT
YYKRNEGAFEALSKLIQSNL

Sequences:

>Translated_100_residues
MENIEIFKALSNKSRLQMLEWLKEPEINFPGQLEHGGFEHGVCVGQIQAKAGLTQSTVSEYLSILQRAGFIEAKRVGQWT
YYKRNEGAFEALSKLIQSNL
>Mature_100_residues
MENIEIFKALSNKSRLQMLEWLKEPEINFPGQLEHGGFEHGVCVGQIQAKAGLTQSTVSEYLSILQRAGFIEAKRVGQWT
YYKRNEGAFEALSKLIQSNL

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11345; Mature: 11345

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENIEIFKALSNKSRLQMLEWLKEPEINFPGQLEHGGFEHGVCVGQIQAKAGLTQSTVSE
CCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCHHHHHH
YLSILQRAGFIEAKRVGQWTYYKRNEGAFEALSKLIQSNL
HHHHHHHCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MENIEIFKALSNKSRLQMLEWLKEPEINFPGQLEHGGFEHGVCVGQIQAKAGLTQSTVSE
CCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHCCCCHHHHHH
YLSILQRAGFIEAKRVGQWTYYKRNEGAFEALSKLIQSNL
HHHHHHHCCCHHHHHCCCCCEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]