| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301118
Identifier: 146301118
GI number: 146301118
Start: 4034091
End: 4034468
Strand: Direct
Name: 146301118
Synonym: Fjoh_3376
Alternate gene names: NA
Gene position: 4034091-4034468 (Clockwise)
Preceding gene: 146301117
Following gene: 146301119
Centisome position: 66.17
GC content: 36.77
Gene sequence:
>378_bases ATGCTTTGGATGAGACCTATTGTAATAGCCGCCGAAGAAGGAACCGTAACTTTTAAATATGTGATTAGGGAAGAAATGTC AAATCCAATTCAAAGTCTGCATGGAGGTGTTACTGCTGCAATTGCTGATGATTGTATTGGCGCTACGATGTTTTCTCTAA ATGAAGAGACCTTTTACACCACCATAAATCTTGTTGTTGATTATTTTGCTCCCGCACATGTTGGCGATACTATTCTTGCG AAAACATTAATCATTAAAAAAGGAAGACAAATGGTGAATGCACAATGCGAAATTTGGAATGCCAACGAAACGCGATTAAT TGCCAGAGCAACTTCTAATTTATTTAAAACAAATGTGGTAAAAAAGGTGCTGTCTTAA
Upstream 100 bases:
>100_bases TCATAAAATCTAATATTAAAACTAAATGGAAACAAAATCAAGATTACAAGTATTACAGGATCACATAAATCGAGAATTTA CTGCTTCTCCTTCCCCTTTT
Downstream 100 bases:
>100_bases AAAGCACCTGATTTCTCATCCTCTTTTTTTGAACAAAAATATACCAATTGGTATAAAATATTTCTATGACACCTTTAAAC CGTAACCTGCTCATTATTAC
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MLWMRPIVIAAEEGTVTFKYVIREEMSNPIQSLHGGVTAAIADDCIGATMFSLNEETFYTTINLVVDYFAPAHVGDTILA KTLIIKKGRQMVNAQCEIWNANETRLIARATSNLFKTNVVKKVLS
Sequences:
>Translated_125_residues MLWMRPIVIAAEEGTVTFKYVIREEMSNPIQSLHGGVTAAIADDCIGATMFSLNEETFYTTINLVVDYFAPAHVGDTILA KTLIIKKGRQMVNAQCEIWNANETRLIARATSNLFKTNVVKKVLS >Mature_125_residues MLWMRPIVIAAEEGTVTFKYVIREEMSNPIQSLHGGVTAAIADDCIGATMFSLNEETFYTTINLVVDYFAPAHVGDTILA KTLIIKKGRQMVNAQCEIWNANETRLIARATSNLFKTNVVKKVLS
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13894; Mature: 13894
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWMRPIVIAAEEGTVTFKYVIREEMSNPIQSLHGGVTAAIADDCIGATMFSLNEETFYT CCCCCCEEEEECCCCEEHHHHHHHHHCCHHHHHHCCEEEHHHHHHHHHHHHHCCCCHHHH TINLVVDYFAPAHVGDTILAKTLIIKKGRQMVNAQCEIWNANETRLIARATSNLFKTNVV HHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHCCEEEEECCCCCEEEHHHHHHHHHHHHH KKVLS HHHHC >Mature Secondary Structure MLWMRPIVIAAEEGTVTFKYVIREEMSNPIQSLHGGVTAAIADDCIGATMFSLNEETFYT CCCCCCEEEEECCCCEEHHHHHHHHHCCHHHHHHCCEEEHHHHHHHHHHHHHCCCCHHHH TINLVVDYFAPAHVGDTILAKTLIIKKGRQMVNAQCEIWNANETRLIARATSNLFKTNVV HHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHCCEEEEECCCCCEEEHHHHHHHHHHHHH KKVLS HHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA