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The map label for this gene is yhiU [C]

Identifier: 146301089

GI number: 146301089

Start: 4000913

End: 4002178

Strand: Reverse

Name: yhiU [C]

Synonym: Fjoh_3345

Alternate gene names: 146301089

Gene position: 4002178-4000913 (Counterclockwise)

Preceding gene: 146301090

Following gene: 146301088

Centisome position: 65.64

GC content: 38.78

Gene sequence:

>1266_bases
ATGAAAAATATATCTAGTTATTTAACCGCAAAGAGCGTAAAGATTTTATCGCAAAGCTTATTTTCTCTGCGTGCCTTGCT
CCCGATGGCTATCGGGATTGCGATCTTTGCGGTTAACTTAATAAGCTGTAACCAAAAGAAAGCAGAAGAACCCCAGAAAG
AAGAAAAAGAAACTACAGAAGTGGCTTTAAGCGAATCTCAATACAAAACTGTAGGAATTGAAACGGGCATTGTAGAAGAC
CGCAATCTTAATAAAGTGATCAAAGCAAATGGTTACACGACAGTTCCTCCGCAAAATTCAGCTGAGGTTTCGACTCTAAT
TGGCGGAACAGTGAAAGACATTTATGTATTGGAAGGAACATTCGTTAACAAAGGGAAAGTTTTGGCAACGATTCAAAATC
TTGAAGTTATTGGCATGCAGGAAGATTACCAGTCGGCGGCTGCCAATGTAGAATATCTGCAATTAGAATACAACCGCCAG
AAAACGCTGAGCGATGAAAATGTAAATCCAAGAAAGACTTTTCAGGAAGTAAAAGCCAAATTAGCAGCAGAAAGAGCCCG
TGCGCAGGCAGCAAAAAACAAATTAGATGCTTTGCACGTCAACACAAAAGGAACAACATCGGTTGTGCCTATTGTTTCGC
CTATTAGTGGTTTTGTCGGGAAAATCAATATTGCCAAAGGTGCTTTTGCAAACACAGGAGTTTCGCTTTTTGAAGTAACA
GATAACAGCCAGATGCATTTAGATTTAAATGTGTACGAGAAAGATTTAGGTTCGATTTCTATTGGTCAGGTGATCGATTT
TGTATTAACGAATCAGTCGAACAAATCGATTAAAGGAAAGATTTTCGGAATCAATAAATCATTTTCTAACGAAAGTAAAA
CCGTTGCTGTTCATGCGAAAATCGATCCTGCCGATGCCAAAGGCCTGATTCCTGGAATGTATGTTTCGGCAAATATTAAT
ATTACAAACGCAACAGTCCCGGCATTGCCAAAAGACGCCGTTGTTCGAAACGCTGATAAATATTTTGTTTTTGTACAAGA
AGAAAGCCATACAGAAGAAAAGCACGAGCATAAAGAAGGAGAAAAAGAAGAAGCTCACGAAAAAGAAATTCATTTTAAAG
CCATTGAAGTCGTTCCTGGAACTACAGATTTAGGTTTTACAGAAGTTAAGTTCGTTGATAAGATTGACTCTCAGGCAAAA
ATTGTTACAAAAGGTGCTTTTTACCTGCTTTCGGCAATGAAAGGCGGAGGAGAGCACGAACATTGA

Upstream 100 bases:

>100_bases
ATCAGGCCATTGATATAAAAAAACAATTTGCAGAAGCAACACACAGTTATAATCAAAGTGCTGTTGAACTTCAATTTCCA
ACTATCAAAAATAATTAATC

Downstream 100 bases:

>100_bases
TTTTTTTAAGGTGCTGAGATTTTAAGATGCTGAGGTGCTGAGTTTTTTTAGAAATGACAAATAGAATATTTAATTTTCAT
TCTCAAAAAAACTTAGCAGC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKNISSYLTAKSVKILSQSLFSLRALLPMAIGIAIFAVNLISCNQKKAEEPQKEEKETTEVALSESQYKTVGIETGIVED
RNLNKVIKANGYTTVPPQNSAEVSTLIGGTVKDIYVLEGTFVNKGKVLATIQNLEVIGMQEDYQSAAANVEYLQLEYNRQ
KTLSDENVNPRKTFQEVKAKLAAERARAQAAKNKLDALHVNTKGTTSVVPIVSPISGFVGKINIAKGAFANTGVSLFEVT
DNSQMHLDLNVYEKDLGSISIGQVIDFVLTNQSNKSIKGKIFGINKSFSNESKTVAVHAKIDPADAKGLIPGMYVSANIN
ITNATVPALPKDAVVRNADKYFVFVQEESHTEEKHEHKEGEKEEAHEKEIHFKAIEVVPGTTDLGFTEVKFVDKIDSQAK
IVTKGAFYLLSAMKGGGEHEH

Sequences:

>Translated_421_residues
MKNISSYLTAKSVKILSQSLFSLRALLPMAIGIAIFAVNLISCNQKKAEEPQKEEKETTEVALSESQYKTVGIETGIVED
RNLNKVIKANGYTTVPPQNSAEVSTLIGGTVKDIYVLEGTFVNKGKVLATIQNLEVIGMQEDYQSAAANVEYLQLEYNRQ
KTLSDENVNPRKTFQEVKAKLAAERARAQAAKNKLDALHVNTKGTTSVVPIVSPISGFVGKINIAKGAFANTGVSLFEVT
DNSQMHLDLNVYEKDLGSISIGQVIDFVLTNQSNKSIKGKIFGINKSFSNESKTVAVHAKIDPADAKGLIPGMYVSANIN
ITNATVPALPKDAVVRNADKYFVFVQEESHTEEKHEHKEGEKEEAHEKEIHFKAIEVVPGTTDLGFTEVKFVDKIDSQAK
IVTKGAFYLLSAMKGGGEHEH
>Mature_421_residues
MKNISSYLTAKSVKILSQSLFSLRALLPMAIGIAIFAVNLISCNQKKAEEPQKEEKETTEVALSESQYKTVGIETGIVED
RNLNKVIKANGYTTVPPQNSAEVSTLIGGTVKDIYVLEGTFVNKGKVLATIQNLEVIGMQEDYQSAAANVEYLQLEYNRQ
KTLSDENVNPRKTFQEVKAKLAAERARAQAAKNKLDALHVNTKGTTSVVPIVSPISGFVGKINIAKGAFANTGVSLFEVT
DNSQMHLDLNVYEKDLGSISIGQVIDFVLTNQSNKSIKGKIFGINKSFSNESKTVAVHAKIDPADAKGLIPGMYVSANIN
ITNATVPALPKDAVVRNADKYFVFVQEESHTEEKHEHKEGEKEEAHEKEIHFKAIEVVPGTTDLGFTEVKFVDKIDSQAK
IVTKGAFYLLSAMKGGGEHEH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 45973; Mature: 45973

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNISSYLTAKSVKILSQSLFSLRALLPMAIGIAIFAVNLISCNQKKAEEPQKEEKETTE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHH
VALSESQYKTVGIETGIVEDRNLNKVIKANGYTTVPPQNSAEVSTLIGGTVKDIYVLEGT
HHCCCCCEEEEEEEECCCCCCCCCEEEECCCEEECCCCCCCCHHHHHCCCEEEEEEEECE
FVNKGKVLATIQNLEVIGMQEDYQSAAANVEYLQLEYNRQKTLSDENVNPRKTFQEVKAK
EECCCEEEEEEECEEEEECHHHHHHHHCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
LAAERARAQAAKNKLDALHVNTKGTTSVVPIVSPISGFVGKINIAKGAFANTGVSLFEVT
HHHHHHHHHHHHCCCEEEEECCCCCCEEEEHHHHHCCHHEEEEECCCCCCCCCEEEEEEE
DNSQMHLDLNVYEKDLGSISIGQVIDFVLTNQSNKSIKGKIFGINKSFSNESKTVAVHAK
CCCEEEEEEEEEHHCCCCEEHHHHHHHHEECCCCCCEEEEEEEECCCCCCCCCEEEEEEE
IDPADAKGLIPGMYVSANINITNATVPALPKDAVVRNADKYFVFVQEESHTEEKHEHKEG
ECCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHCC
EKEEAHEKEIHFKAIEVVPGTTDLGFTEVKFVDKIDSQAKIVTKGAFYLLSAMKGGGEHE
CHHHHHHHHEEEEEEEEECCCCCCCCCEEHHHHHCCCCCEEEECHHHHHHHHHCCCCCCC
H
C
>Mature Secondary Structure
MKNISSYLTAKSVKILSQSLFSLRALLPMAIGIAIFAVNLISCNQKKAEEPQKEEKETTE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHH
VALSESQYKTVGIETGIVEDRNLNKVIKANGYTTVPPQNSAEVSTLIGGTVKDIYVLEGT
HHCCCCCEEEEEEEECCCCCCCCCEEEECCCEEECCCCCCCCHHHHHCCCEEEEEEEECE
FVNKGKVLATIQNLEVIGMQEDYQSAAANVEYLQLEYNRQKTLSDENVNPRKTFQEVKAK
EECCCEEEEEEECEEEEECHHHHHHHHCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
LAAERARAQAAKNKLDALHVNTKGTTSVVPIVSPISGFVGKINIAKGAFANTGVSLFEVT
HHHHHHHHHHHHCCCEEEEECCCCCCEEEEHHHHHCCHHEEEEECCCCCCCCCEEEEEEE
DNSQMHLDLNVYEKDLGSISIGQVIDFVLTNQSNKSIKGKIFGINKSFSNESKTVAVHAK
CCCEEEEEEEEEHHCCCCEEHHHHHHHHEECCCCCCEEEEEEEECCCCCCCCCEEEEEEE
IDPADAKGLIPGMYVSANINITNATVPALPKDAVVRNADKYFVFVQEESHTEEKHEHKEG
ECCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHCC
EKEEAHEKEIHFKAIEVVPGTTDLGFTEVKFVDKIDSQAKIVTKGAFYLLSAMKGGGEHE
CHHHHHHHHEEEEEEEEECCCCCCCCCEEHHHHHCCCCCEEEECHHHHHHHHHCCCCCCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]