| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301072
Identifier: 146301072
GI number: 146301072
Start: 3977667
End: 3978101
Strand: Direct
Name: 146301072
Synonym: Fjoh_3328
Alternate gene names: NA
Gene position: 3977667-3978101 (Clockwise)
Preceding gene: 146301070
Following gene: 146301073
Centisome position: 65.24
GC content: 33.33
Gene sequence:
>435_bases ATGGCTTACAATACGAAAGAATTAGTACGATTTTTAGATGCTCAAAACAAGCTGTATTTAACGGCTCTTGATGAAATAAA AAAAGGTAAAAAGGAATCTCCGTGGATGTGGTTTATTTTTCCTCAAATAAAAGGAATGGGTTCCAGCGATACTTCTAAGT TTTACGAAATTAAAAGTGCTGATGAAGCTATTGCTTTCTTAGAACATCCCATTTTAGGAAAACATCTTGTTGAAATTACG GCAGAATTAATTAAGAAAGAAGATGAGACTGTAACTGATATATTTGGAACTCCGGATGTTGCAAAACTACAGTCGTGTAT GACTTTGTTTGCCAGTATTCAAAATACAGAACCGGTTTTTCAGGAAGTTTTGCATAAATACTTCGACGGATCATCTGACT TTCATACACTTCAATTACTTTACAGTAATTTATAG
Upstream 100 bases:
>100_bases TTTAAAAAAATAGCAGTAAAAAAAAGATTTAGTAATATACAACTAAACTTATTTTCAGTAGTTTTATGGCCTGATACCCC CGAATCAATATCAGTAAAGA
Downstream 100 bases:
>100_bases GAAGTAAGAATCATTTTGCAAATACTCCAGATCTTCTAAAAATAAGATCAGTTTAGCTGCATTTTTAAATAAGATATCTA TATTTGCAACACTGTTGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NUDIX Family Protein Hydrolase; ADP-Ribose Pyrophosphatase With Conserved Domain
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MAYNTKELVRFLDAQNKLYLTALDEIKKGKKESPWMWFIFPQIKGMGSSDTSKFYEIKSADEAIAFLEHPILGKHLVEIT AELIKKEDETVTDIFGTPDVAKLQSCMTLFASIQNTEPVFQEVLHKYFDGSSDFHTLQLLYSNL
Sequences:
>Translated_144_residues MAYNTKELVRFLDAQNKLYLTALDEIKKGKKESPWMWFIFPQIKGMGSSDTSKFYEIKSADEAIAFLEHPILGKHLVEIT AELIKKEDETVTDIFGTPDVAKLQSCMTLFASIQNTEPVFQEVLHKYFDGSSDFHTLQLLYSNL >Mature_143_residues AYNTKELVRFLDAQNKLYLTALDEIKKGKKESPWMWFIFPQIKGMGSSDTSKFYEIKSADEAIAFLEHPILGKHLVEITA ELIKKEDETVTDIFGTPDVAKLQSCMTLFASIQNTEPVFQEVLHKYFDGSSDFHTLQLLYSNL
Specific function: Unknown
COG id: COG5579
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16502; Mature: 16371
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYNTKELVRFLDAQNKLYLTALDEIKKGKKESPWMWFIFPQIKGMGSSDTSKFYEIKSA CCCCHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCH DEAIAFLEHPILGKHLVEITAELIKKEDETVTDIFGTPDVAKLQSCMTLFASIQNTEPVF HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHH QEVLHKYFDGSSDFHTLQLLYSNL HHHHHHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure AYNTKELVRFLDAQNKLYLTALDEIKKGKKESPWMWFIFPQIKGMGSSDTSKFYEIKSA CCCHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCH DEAIAFLEHPILGKHLVEITAELIKKEDETVTDIFGTPDVAKLQSCMTLFASIQNTEPVF HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHH QEVLHKYFDGSSDFHTLQLLYSNL HHHHHHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA