| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301049
Identifier: 146301049
GI number: 146301049
Start: 3948904
End: 3949398
Strand: Reverse
Name: 146301049
Synonym: Fjoh_3305
Alternate gene names: NA
Gene position: 3949398-3948904 (Counterclockwise)
Preceding gene: 146301050
Following gene: 146301048
Centisome position: 64.78
GC content: 32.12
Gene sequence:
>495_bases ATGAGTAAAACGGCACGATTTGTAGTTATAATTAATGATAATGTGTTTTGGATGGAGAACCAGGCACTTCAGTTTTATGA GCGTTTATTTGAACAGAAAGATGCAGCGGTACAAACTGCAGAAGAAAGATTTTCTCAAAAAGAACTGTTTCGAATACAGA ATGATTTTTCAATTGAAATTCTGATGGTTTATGAAGGCGAAAATCCGCAGTCATTTTTAAAGCTGGATTCGTCCAGACTT TCCAATGAAAATCTCGAAGCAGAAAAAGCAATTTGTTTAAAAGACATTATTTATTTTAATGAAGAAGATTTAGCAGTGCT TTTTAAACGTGCCGAAGAAATTGCATCGCAGCGAAAACACGATTTAATTTGGGTAAAAGCTTTTGCTGTTGACGAAGTTT TAATTAAAACACTAAAAGCTTTAGACTATAAGGAATTTGAGTTTCAGGAAAACACTATAGAAAAACAAATTTATTTCAAG AAAAAACTACACTGA
Upstream 100 bases:
>100_bases TAAAAAAAAAAGCCTTTTTGCACAAAAGAACCGTCATATTGCTCTTTTCTTAAAACCAGAATCCCTGCAAATTTGCTTCT TCATCAATACTAAAAAAGAT
Downstream 100 bases:
>100_bases TGTTAGGTTTAGAGTGTTGATTTTGAGTTTGTATTTTATAAAACATTCCTATGATAGTATAAAGCAATATTGATTGATGT GATTTACTTTTAAGTGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSKTARFVVIINDNVFWMENQALQFYERLFEQKDAAVQTAEERFSQKELFRIQNDFSIEILMVYEGENPQSFLKLDSSRL SNENLEAEKAICLKDIIYFNEEDLAVLFKRAEEIASQRKHDLIWVKAFAVDEVLIKTLKALDYKEFEFQENTIEKQIYFK KKLH
Sequences:
>Translated_164_residues MSKTARFVVIINDNVFWMENQALQFYERLFEQKDAAVQTAEERFSQKELFRIQNDFSIEILMVYEGENPQSFLKLDSSRL SNENLEAEKAICLKDIIYFNEEDLAVLFKRAEEIASQRKHDLIWVKAFAVDEVLIKTLKALDYKEFEFQENTIEKQIYFK KKLH >Mature_163_residues SKTARFVVIINDNVFWMENQALQFYERLFEQKDAAVQTAEERFSQKELFRIQNDFSIEILMVYEGENPQSFLKLDSSRLS NENLEAEKAICLKDIIYFNEEDLAVLFKRAEEIASQRKHDLIWVKAFAVDEVLIKTLKALDYKEFEFQENTIEKQIYFKK KLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19591; Mature: 19459
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTARFVVIINDNVFWMENQALQFYERLFEQKDAAVQTAEERFSQKELFRIQNDFSIEI CCCCEEEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LMVYEGENPQSFLKLDSSRLSNENLEAEKAICLKDIIYFNEEDLAVLFKRAEEIASQRKH EEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC DLIWVKAFAVDEVLIKTLKALDYKEFEFQENTIEKQIYFKKKLH CEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKTARFVVIINDNVFWMENQALQFYERLFEQKDAAVQTAEERFSQKELFRIQNDFSIEI CCCEEEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LMVYEGENPQSFLKLDSSRLSNENLEAEKAICLKDIIYFNEEDLAVLFKRAEEIASQRKH EEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC DLIWVKAFAVDEVLIKTLKALDYKEFEFQENTIEKQIYFKKKLH CEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA