Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301045

Identifier: 146301045

GI number: 146301045

Start: 3943964

End: 3944854

Strand: Direct

Name: 146301045

Synonym: Fjoh_3301

Alternate gene names: NA

Gene position: 3943964-3944854 (Clockwise)

Preceding gene: 146301044

Following gene: 146301046

Centisome position: 64.69

GC content: 33.89

Gene sequence:

>891_bases
ATGAATAAAAGGCAGATTTTACTGGTTTTACTTATCATTGGCACTGCCTTTTGGGGCATATCCTATTCTGTTACCAAATT
AGCAATTGGAAATTTTTCGCCATCCACTTTTTTATTTTATCGCTTTTTAATGGCTGTAATGGTTCTAACTGTGATTTTCT
GGAAATATGTTAGAAATACCAATTTAGAATCTATTAAAACCGGTGCAGTTTTGGCCGTTCCTATGTTTTTAGGAATTCAT
TTGCAGACAGTTGGTTTAAAATATACCGATGCTTCTCAATGTTCTTTTATAGCCGGATTATGTGTTATTATAATTCCGTT
GATAAAACTTAGCATTTACAAAACCAGTCCGCCTTTAAAAATCTGGATAGCTGCTTTAACAGCATTATCGGGATTATTTA
TTATCGCTGTAAAAGACAAATTCACCATAAACCTGGGAGATCTATATACAATTGCCGGAGCCTTTGCTTTTGCAGTTTAT
TTAATTTCTGTAGAAAAACATTCAGCTGCAAAAAACCTTTTAACGTCAATTGTACCCATGTTTGCATTTTGTGCTTTATT
CACTTTCATTTTGGCACTTACAGATCAAAACGCAGATTGGTTTCCAGAAAGAAATACATTTTGGCTTGGAGTCGTTTATT
GTGCATTATTTTCTACAGCATACATGTACACCATTTCAAATATATCACAACGCTATTTATCGGCAGAAAGAGTTGCGGTA
ATTTATTTATTTGAACCTATTTTTGGTGCCATAGCCGCATTCTTTATTCTTGGCGAAAATCTTTCGCTTCGATTGCTTTT
GGGAGGCAGTCTTATTTTTGCTGCGACTCTTATTTCCGAAGTAAACCTTAAAAACTCCAATTACAGATTAGGAATTAAAA
AAACCTCTTAA

Upstream 100 bases:

>100_bases
AGTTTTTATACCAAAAATGGTTTTGTACAATTTGACACCCATATTTTCAGACTGGGCGATGACGAACAAACCGATTTAAT
GATGAAGAAAATTTTAATCA

Downstream 100 bases:

>100_bases
TCCAATTCTTACATACTGATAATTATATAATTACAACTTTTAATAGTATAAGCACAATAAGCTTTTCTGAAATAACTTTG
ATATACGATTCAATTTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNKRQILLVLLIIGTAFWGISYSVTKLAIGNFSPSTFLFYRFLMAVMVLTVIFWKYVRNTNLESIKTGAVLAVPMFLGIH
LQTVGLKYTDASQCSFIAGLCVIIIPLIKLSIYKTSPPLKIWIAALTALSGLFIIAVKDKFTINLGDLYTIAGAFAFAVY
LISVEKHSAAKNLLTSIVPMFAFCALFTFILALTDQNADWFPERNTFWLGVVYCALFSTAYMYTISNISQRYLSAERVAV
IYLFEPIFGAIAAFFILGENLSLRLLLGGSLIFAATLISEVNLKNSNYRLGIKKTS

Sequences:

>Translated_296_residues
MNKRQILLVLLIIGTAFWGISYSVTKLAIGNFSPSTFLFYRFLMAVMVLTVIFWKYVRNTNLESIKTGAVLAVPMFLGIH
LQTVGLKYTDASQCSFIAGLCVIIIPLIKLSIYKTSPPLKIWIAALTALSGLFIIAVKDKFTINLGDLYTIAGAFAFAVY
LISVEKHSAAKNLLTSIVPMFAFCALFTFILALTDQNADWFPERNTFWLGVVYCALFSTAYMYTISNISQRYLSAERVAV
IYLFEPIFGAIAAFFILGENLSLRLLLGGSLIFAATLISEVNLKNSNYRLGIKKTS
>Mature_296_residues
MNKRQILLVLLIIGTAFWGISYSVTKLAIGNFSPSTFLFYRFLMAVMVLTVIFWKYVRNTNLESIKTGAVLAVPMFLGIH
LQTVGLKYTDASQCSFIAGLCVIIIPLIKLSIYKTSPPLKIWIAALTALSGLFIIAVKDKFTINLGDLYTIAGAFAFAVY
LISVEKHSAAKNLLTSIVPMFAFCALFTFILALTDQNADWFPERNTFWLGVVYCALFSTAYMYTISNISQRYLSAERVAV
IYLFEPIFGAIAAFFILGENLSLRLLLGGSLIFAATLISEVNLKNSNYRLGIKKTS

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32870; Mature: 32870

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRQILLVLLIIGTAFWGISYSVTKLAIGNFSPSTFLFYRFLMAVMVLTVIFWKYVRNT
CCCHHHHHHHHHHHHHHHCCCCEEHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
NLESIKTGAVLAVPMFLGIHLQTVGLKYTDASQCSFIAGLCVIIIPLIKLSIYKTSPPLK
CHHHHHCCHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCHH
IWIAALTALSGLFIIAVKDKFTINLGDLYTIAGAFAFAVYLISVEKHSAAKNLLTSIVPM
HHHHHHHHHCCEEEEEEECEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAFCALFTFILALTDQNADWFPERNTFWLGVVYCALFSTAYMYTISNISQRYLSAERVAV
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
IYLFEPIFGAIAAFFILGENLSLRLLLGGSLIFAATLISEVNLKNSNYRLGIKKTS
EEEHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEECC
>Mature Secondary Structure
MNKRQILLVLLIIGTAFWGISYSVTKLAIGNFSPSTFLFYRFLMAVMVLTVIFWKYVRNT
CCCHHHHHHHHHHHHHHHCCCCEEHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
NLESIKTGAVLAVPMFLGIHLQTVGLKYTDASQCSFIAGLCVIIIPLIKLSIYKTSPPLK
CHHHHHCCHHHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCHH
IWIAALTALSGLFIIAVKDKFTINLGDLYTIAGAFAFAVYLISVEKHSAAKNLLTSIVPM
HHHHHHHHHCCEEEEEEECEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAFCALFTFILALTDQNADWFPERNTFWLGVVYCALFSTAYMYTISNISQRYLSAERVAV
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
IYLFEPIFGAIAAFFILGENLSLRLLLGGSLIFAATLISEVNLKNSNYRLGIKKTS
EEEHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]