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The map label for this gene is clpB [H]

Identifier: 146301025

GI number: 146301025

Start: 3920641

End: 3923100

Strand: Direct

Name: clpB [H]

Synonym: Fjoh_3281

Alternate gene names: 146301025

Gene position: 3920641-3923100 (Clockwise)

Preceding gene: 146301024

Following gene: 146301029

Centisome position: 64.31

GC content: 33.25

Gene sequence:

>2460_bases
ATGGAAGAAGAAAAAAACGTTTTCAGTGCAGAATTATTAAGCGCATTAGAAATTGCGAAGAAAATCGCTAAAACCAATTT
AAATAAATATTACTCGGCGTCACATTTGTTAAAAGCAGTTTTAAACAGGGATTTATCACTCTTAAAACGTCTTGAAGCTA
TGGGCAAAGATGTTTATTATCTTGATGAATGGGCAGAAGTACGAATTGAAGAAGAACCAAAAACTACTCATGTTCTTGAT
GCTGAGCCAAGTGATTTAATTGATGAGATTATAAAAGAGGCCGAATCAGTACGTATAGCACTTAATGAAGATGAAATTAG
TCTTTATGCCGTGATAATTGCTTTAAGTTCTCCGGGTGTAGGTTTCAATTTCGATCAAATGAAGTCTTATCCTATCTCAA
GAAATGAATTATTAGAAGATCAGATAGTTATTCCGCAAACTGAGAGTGGTGCAAAACAAGAAGTAAAAAAAGGTTTTTTA
AGCAAATACTGTATCCATAAAAATCTGGAGAAAAATAAAAAAAGAATTCCTGCAATTGGGCGTGAAGCCGAATTGAATGC
CATAAAAGAAATTCTCTGCCGATTCTCTAAACCTAATGTTCTGCTTATAGGCGACCGAGGCATTGGAAAATCGATTTTAA
TTGATACTCTTGTTCAAAATGTAATAACAAATCAGGTTCCGGATGCTTTAAACAAAGTACAGCTTTTTGAACTCGACTTA
TCTTCTCTTATTGCCGGAGCTTCATACAAAGGCGAAATTGAAGACCGTTTAAAAAACTGCATTCAGGAATTAAAACAATA
CCCCAGAGCTATTTTAATTATTGAAGAAATTCATATTTTACTCGATAAAAACGGAGGAGATTCCGGCGTTTCAAATGTTC
TTAAAGGCGAACTGGCAAAAGGATTAAATATTATCGCGACCTCAACAATCGATGAATTTTCAAAAAGAATTGAGAAAGAA
CAAGGACTTTCCGGAATGTTTGAGATCGTTAAATTAGAAGAATCTGATGATGAGACTTTGTTCAGAATGATTCGCGAATC
TATCAAAACCTATCAGGAACATCATAAAATACAAATAGACGATGAAACCATTTCAGAATCTATCCGCTTATCCAGAAGGT
ATTTAAAAGAAAAAAGCCTTCCTGAATCTGCAATTAATCTGATCGATCATACGATGTCGGTTTTAAAAACTTCAGGAGAA
ACTTTTCTTAATGAAAAACAATCTATTATCAACAGATTAAATCTTTTAAAAGAAAATACCAGCAATTTATCTGAAGATCA
ATTGATAAAAGAATACAATTGGTTTCTGGTTGATTTAATAAACAAAACAACATTTTTGATGGATGTTGATGAACAAAATG
AAAAAAGAAATTTTGAAACATCAGAATCGATCTTAAATTATATTGAAAACCTGATTAAAACGCTTGAAGAAAAGGCACTT
GATAAACGCTCTCATATTGAAGCTTTTGATTTGTCTTTGATTATTGCTAAAAAAACCGGAATTCCGGCAGGAAAACTTAA
GGAAGAAGAAAAACAGAAACTAAACAATATTGAGGAAGTTCTAAACCGAAGAGTTATTGGACAGGATCATTGTATAGCAA
CGGTTGCAGGCTCTATTTTAGAGGCAAGATCCGGATTAAGCAAAGCCGGACAGCCTATAGCATCTTTCTTTTTTCTTGGA
CCAACAGGAACGGGAAAAACAGAATTAGCCAAAAGTTTAGCCGAGTTTCTGTTTCAGGATGAAAATGCCATCATTAGATT
TGATATGTCTGAGTTTAAAGAAGAGCATTCAGCAGCGCTTCTTTACGGTGCGCCTCCTGGTTATGTAGGTTATGAAGAAG
GCGGTCTGCTGGTGAACAAAATCAGACAAAAACCTTATTCTATTGTTTTATTTGACGAAATTGAAAAAGCACATCCTTCT
GTTTTTGACGTATTCCTTCAAATTATGGACGAAGGAAAACTACATGATCGTTTAGGAAAAGAAGGTGATTTTTCGAATGC
TATTATACTTTTTACCTCAAATATTGGGGCAGATCATATTGTAAATACTTTTAATAACGGCGAAATTCCAACATCTGGTT
CTTTAATGGAAATTATGGGGAATTATTTCAGACCTGAATTTTTAGGACGTTTAACTGAAATAGTACCTTTTGCCCCTATC
AGTAAAGAAAATGCATTGAAAATATTCGAAATCCATCTCAAAAAAGAGTTCATGGATTTATTAAAAAACATCAATATTAA
AGTTGAAATTCCCATGGAGGCTAAACTTTATCTTGCTGAAAACGGATATAATGCTAAATATGGTGCAAGACCAATCAAAA
GTATTATCAGAAGTCATTTAAGAAGACCTTTGGCAAAAAAAATAATTTCAGGAGAAGTAAAAGACGGCGATACAATTTCT
GTTACCATAGAAAACAATGAAGTAAAATGGGTAAAAGAAGAATTTACCGCTGTAAATTAA

Upstream 100 bases:

>100_bases
ATACGCTTAAACAAGGACAAACAAACTAACTGCATTAAAGGATTAAATATCAGCTATAAAGTAAAAAAATATCTGGTATG
GTCTAAAGATTAAATTTGGT

Downstream 100 bases:

>100_bases
ATCGTAAAAACAATTAATCCAGTTTAGTTAGTTTATAAACCCTAAAAAACGTCTTGCGACGTTTTTTAGGGTTGTAAGTA
TTTTATAAAATTTCCTTTTT

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 819; Mature: 819

Protein sequence:

>819_residues
MEEEKNVFSAELLSALEIAKKIAKTNLNKYYSASHLLKAVLNRDLSLLKRLEAMGKDVYYLDEWAEVRIEEEPKTTHVLD
AEPSDLIDEIIKEAESVRIALNEDEISLYAVIIALSSPGVGFNFDQMKSYPISRNELLEDQIVIPQTESGAKQEVKKGFL
SKYCIHKNLEKNKKRIPAIGREAELNAIKEILCRFSKPNVLLIGDRGIGKSILIDTLVQNVITNQVPDALNKVQLFELDL
SSLIAGASYKGEIEDRLKNCIQELKQYPRAILIIEEIHILLDKNGGDSGVSNVLKGELAKGLNIIATSTIDEFSKRIEKE
QGLSGMFEIVKLEESDDETLFRMIRESIKTYQEHHKIQIDDETISESIRLSRRYLKEKSLPESAINLIDHTMSVLKTSGE
TFLNEKQSIINRLNLLKENTSNLSEDQLIKEYNWFLVDLINKTTFLMDVDEQNEKRNFETSESILNYIENLIKTLEEKAL
DKRSHIEAFDLSLIIAKKTGIPAGKLKEEEKQKLNNIEEVLNRRVIGQDHCIATVAGSILEARSGLSKAGQPIASFFFLG
PTGTGKTELAKSLAEFLFQDENAIIRFDMSEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRQKPYSIVLFDEIEKAHPS
VFDVFLQIMDEGKLHDRLGKEGDFSNAIILFTSNIGADHIVNTFNNGEIPTSGSLMEIMGNYFRPEFLGRLTEIVPFAPI
SKENALKIFEIHLKKEFMDLLKNINIKVEIPMEAKLYLAENGYNAKYGARPIKSIIRSHLRRPLAKKIISGEVKDGDTIS
VTIENNEVKWVKEEFTAVN

Sequences:

>Translated_819_residues
MEEEKNVFSAELLSALEIAKKIAKTNLNKYYSASHLLKAVLNRDLSLLKRLEAMGKDVYYLDEWAEVRIEEEPKTTHVLD
AEPSDLIDEIIKEAESVRIALNEDEISLYAVIIALSSPGVGFNFDQMKSYPISRNELLEDQIVIPQTESGAKQEVKKGFL
SKYCIHKNLEKNKKRIPAIGREAELNAIKEILCRFSKPNVLLIGDRGIGKSILIDTLVQNVITNQVPDALNKVQLFELDL
SSLIAGASYKGEIEDRLKNCIQELKQYPRAILIIEEIHILLDKNGGDSGVSNVLKGELAKGLNIIATSTIDEFSKRIEKE
QGLSGMFEIVKLEESDDETLFRMIRESIKTYQEHHKIQIDDETISESIRLSRRYLKEKSLPESAINLIDHTMSVLKTSGE
TFLNEKQSIINRLNLLKENTSNLSEDQLIKEYNWFLVDLINKTTFLMDVDEQNEKRNFETSESILNYIENLIKTLEEKAL
DKRSHIEAFDLSLIIAKKTGIPAGKLKEEEKQKLNNIEEVLNRRVIGQDHCIATVAGSILEARSGLSKAGQPIASFFFLG
PTGTGKTELAKSLAEFLFQDENAIIRFDMSEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRQKPYSIVLFDEIEKAHPS
VFDVFLQIMDEGKLHDRLGKEGDFSNAIILFTSNIGADHIVNTFNNGEIPTSGSLMEIMGNYFRPEFLGRLTEIVPFAPI
SKENALKIFEIHLKKEFMDLLKNINIKVEIPMEAKLYLAENGYNAKYGARPIKSIIRSHLRRPLAKKIISGEVKDGDTIS
VTIENNEVKWVKEEFTAVN
>Mature_819_residues
MEEEKNVFSAELLSALEIAKKIAKTNLNKYYSASHLLKAVLNRDLSLLKRLEAMGKDVYYLDEWAEVRIEEEPKTTHVLD
AEPSDLIDEIIKEAESVRIALNEDEISLYAVIIALSSPGVGFNFDQMKSYPISRNELLEDQIVIPQTESGAKQEVKKGFL
SKYCIHKNLEKNKKRIPAIGREAELNAIKEILCRFSKPNVLLIGDRGIGKSILIDTLVQNVITNQVPDALNKVQLFELDL
SSLIAGASYKGEIEDRLKNCIQELKQYPRAILIIEEIHILLDKNGGDSGVSNVLKGELAKGLNIIATSTIDEFSKRIEKE
QGLSGMFEIVKLEESDDETLFRMIRESIKTYQEHHKIQIDDETISESIRLSRRYLKEKSLPESAINLIDHTMSVLKTSGE
TFLNEKQSIINRLNLLKENTSNLSEDQLIKEYNWFLVDLINKTTFLMDVDEQNEKRNFETSESILNYIENLIKTLEEKAL
DKRSHIEAFDLSLIIAKKTGIPAGKLKEEEKQKLNNIEEVLNRRVIGQDHCIATVAGSILEARSGLSKAGQPIASFFFLG
PTGTGKTELAKSLAEFLFQDENAIIRFDMSEFKEEHSAALLYGAPPGYVGYEEGGLLVNKIRQKPYSIVLFDEIEKAHPS
VFDVFLQIMDEGKLHDRLGKEGDFSNAIILFTSNIGADHIVNTFNNGEIPTSGSLMEIMGNYFRPEFLGRLTEIVPFAPI
SKENALKIFEIHLKKEFMDLLKNINIKVEIPMEAKLYLAENGYNAKYGARPIKSIIRSHLRRPLAKKIISGEVKDGDTIS
VTIENNEVKWVKEEFTAVN

Specific function: Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 UVR domain [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=326, Percent_Identity=35.2760736196319, Blast_Score=182, Evalue=1e-45,
Organism=Escherichia coli, GI1788943, Length=706, Percent_Identity=34.7025495750708, Blast_Score=427, Evalue=1e-120,
Organism=Escherichia coli, GI1787109, Length=332, Percent_Identity=34.9397590361446, Blast_Score=223, Evalue=4e-59,
Organism=Saccharomyces cerevisiae, GI6320464, Length=764, Percent_Identity=37.0418848167539, Blast_Score=439, Evalue=1e-124,
Organism=Saccharomyces cerevisiae, GI6323002, Length=708, Percent_Identity=34.6045197740113, Blast_Score=371, Evalue=1e-103,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR004176
- InterPro:   IPR023150
- InterPro:   IPR001943 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF02861 Clp_N; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 92601; Mature: 92601

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEEKNVFSAELLSALEIAKKIAKTNLNKYYSASHLLKAVLNRDLSLLKRLEAMGKDVYY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LDEWAEVRIEEEPKTTHVLDAEPSDLIDEIIKEAESVRIALNEDEISLYAVIIALSSPGV
ECCHHHEEECCCCCCCEEECCCHHHHHHHHHHHHHHEEEEECCCCEEEEEEEEEECCCCC
GFNFDQMKSYPISRNELLEDQIVIPQTESGAKQEVKKGFLSKYCIHKNLEKNKKRIPAIG
CCCHHHHHCCCCCHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC
REAELNAIKEILCRFSKPNVLLIGDRGIGKSILIDTLVQNVITNQVPDALNKVQLFELDL
CHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECH
SSLIAGASYKGEIEDRLKNCIQELKQYPRAILIIEEIHILLDKNGGDSGVSNVLKGELAK
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHEEEEEECCCCCHHHHHHHHHHHHC
GLNIIATSTIDEFSKRIEKEQGLSGMFEIVKLEESDDETLFRMIRESIKTYQEHHKIQID
CCEEEEHHHHHHHHHHHHHHCCCHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCEEEC
DETISESIRLSRRYLKEKSLPESAINLIDHTMSVLKTSGETFLNEKQSIINRLNLLKENT
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
SNLSEDQLIKEYNWFLVDLINKTTFLMDVDEQNEKRNFETSESILNYIENLIKTLEEKAL
CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DKRSHIEAFDLSLIIAKKTGIPAGKLKEEEKQKLNNIEEVLNRRVIGQDHCIATVAGSIL
HHHHCCCHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EARSGLSKAGQPIASFFFLGPTGTGKTELAKSLAEFLFQDENAIIRFDMSEFKEEHSAAL
HHHHCHHHCCCCHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCEEE
LYGAPPGYVGYEEGGLLVNKIRQKPYSIVLFDEIEKAHPSVFDVFLQIMDEGKLHDRLGK
EECCCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHHHCHHHHHHHHHHHHCCCHHHHCCC
EGDFSNAIILFTSNIGADHIVNTFNNGEIPTSGSLMEIMGNYFRPEFLGRLTEIVPFAPI
CCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCC
SKENALKIFEIHLKKEFMDLLKNINIKVEIPMEAKLYLAENGYNAKYGARPIKSIIRSHL
CCCCCEEHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHH
RRPLAKKIISGEVKDGDTISVTIENNEVKWVKEEFTAVN
HHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHCCCC
>Mature Secondary Structure
MEEEKNVFSAELLSALEIAKKIAKTNLNKYYSASHLLKAVLNRDLSLLKRLEAMGKDVYY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LDEWAEVRIEEEPKTTHVLDAEPSDLIDEIIKEAESVRIALNEDEISLYAVIIALSSPGV
ECCHHHEEECCCCCCCEEECCCHHHHHHHHHHHHHHEEEEECCCCEEEEEEEEEECCCCC
GFNFDQMKSYPISRNELLEDQIVIPQTESGAKQEVKKGFLSKYCIHKNLEKNKKRIPAIG
CCCHHHHHCCCCCHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC
REAELNAIKEILCRFSKPNVLLIGDRGIGKSILIDTLVQNVITNQVPDALNKVQLFELDL
CHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECH
SSLIAGASYKGEIEDRLKNCIQELKQYPRAILIIEEIHILLDKNGGDSGVSNVLKGELAK
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHEEEEEECCCCCHHHHHHHHHHHHC
GLNIIATSTIDEFSKRIEKEQGLSGMFEIVKLEESDDETLFRMIRESIKTYQEHHKIQID
CCEEEEHHHHHHHHHHHHHHCCCHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCEEEC
DETISESIRLSRRYLKEKSLPESAINLIDHTMSVLKTSGETFLNEKQSIINRLNLLKENT
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
SNLSEDQLIKEYNWFLVDLINKTTFLMDVDEQNEKRNFETSESILNYIENLIKTLEEKAL
CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DKRSHIEAFDLSLIIAKKTGIPAGKLKEEEKQKLNNIEEVLNRRVIGQDHCIATVAGSIL
HHHHCCCHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EARSGLSKAGQPIASFFFLGPTGTGKTELAKSLAEFLFQDENAIIRFDMSEFKEEHSAAL
HHHHCHHHCCCCHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCEEE
LYGAPPGYVGYEEGGLLVNKIRQKPYSIVLFDEIEKAHPSVFDVFLQIMDEGKLHDRLGK
EECCCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHHHCHHHHHHHHHHHHCCCHHHHCCC
EGDFSNAIILFTSNIGADHIVNTFNNGEIPTSGSLMEIMGNYFRPEFLGRLTEIVPFAPI
CCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCC
SKENALKIFEIHLKKEFMDLLKNINIKVEIPMEAKLYLAENGYNAKYGARPIKSIIRSHL
CCCCCEEHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHH
RRPLAKKIISGEVKDGDTISVTIENNEVKWVKEEFTAVN
HHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]