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The map label for this gene is 146301024

Identifier: 146301024

GI number: 146301024

Start: 3919581

End: 3920633

Strand: Direct

Name: 146301024

Synonym: Fjoh_3280

Alternate gene names: NA

Gene position: 3919581-3920633 (Clockwise)

Preceding gene: 146300992

Following gene: 146301025

Centisome position: 64.29

GC content: 34.09

Gene sequence:

>1053_bases
ATGAATCAAAAAAATATTGATATCAGGGTTGTGTTTTTTTTCGCAATTCTCTTATTAGCTGGAATCATTGCATTTATAGT
GCAGCTTTTTAATCATGTCGACTGTGATGATGCTAAATTTTATATTTTTGCAGACCATTCTCAATCCGAAGAATCGATTG
AGTTTTACGACAAAACTCCAAACGCAAAATCATGGATTTGGGACTTTGGAGACGGATCAGAAAAAGATGTCAGAAAACAC
ACTTTTCACATCTATAAAAATCCGGGAAAATACTATGTTTCTTTAACAATAAACGGTAATTGCACCCATACAAAAGAGAT
CACGATAAAGGATAAATTTGCTGCAGATAAAATAGGCACTCCAAAAATTATTGTACCCAAAACTATTACTGTTGGACAGC
CCGCTTATTTTAAATCAATTTCTGATGATGCCAGAACCTGGGAATGGGCATTTGGTGAAAATAAAGGCATTGATGAAACC
TCTTCTAATCCTGTTTACAGCTTTATCACGCCGGGCGAAAAAACGATTACTTTAGTCATAAACGGAGATTTCAGCCGTGT
GGCAAAAAAGATAATTTATGTGCATCCACGAGTTATAAAAAAGACGAATCCGCTGGATGTAAGCTCTTATGAATTTGAGA
AAAAAGCCGAAGCTTTTGCTTTGCCAAGAGGACCTGTTAAAAAAGATCCGCTTGAAGAAATGCTGCAATATGTTCCGGTT
GCTCCAAAAGCAAAAACTGTAAAAGACACTGTTGCCACGACTAAAAAAGCACCTAAAATGTCTGAAGACCAGTTTGAAAT
TTTGTTTAAAAAAGTAGCCGAAGGCAGTAAAGTTAAAGATGATTTTGCTGAGTTTTTATGTGATGATCTGGATATTCCGG
TTGTAAAAAATGATAAAGATCTCTTAACTTTTGCACAATTATGTGCTTCTGTAAAAGGAAAAAAAATAAAAATTGAGTCA
ATACGCTTAAACAAGGACAAACAAACTAACTGCATTAAAGGATTAAATATCAGCTATAAAGTAAAAAAATATCTGGTATG
GTCTAAAGATTAA

Upstream 100 bases:

>100_bases
ATATGATAAATATTAAGTTTTTTAAAATAATTAAAACTACATTTGCTTCCGTTTTTTGTTAAAATTATCTTACTAATAGT
AAAATATCCAAAGTCTAAAA

Downstream 100 bases:

>100_bases
ATTTGGTATGGAAGAAGAAAAAAACGTTTTCAGTGCAGAATTATTAAGCGCATTAGAAATTGCGAAGAAAATCGCTAAAA
CCAATTTAAATAAATATTAC

Product: PKD domain-containing protein

Products: NA

Alternate protein names: Surface Layer Protein B; PKD Domain Containing Protein; KP-43 Peptidase

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNQKNIDIRVVFFFAILLLAGIIAFIVQLFNHVDCDDAKFYIFADHSQSEESIEFYDKTPNAKSWIWDFGDGSEKDVRKH
TFHIYKNPGKYYVSLTINGNCTHTKEITIKDKFAADKIGTPKIIVPKTITVGQPAYFKSISDDARTWEWAFGENKGIDET
SSNPVYSFITPGEKTITLVINGDFSRVAKKIIYVHPRVIKKTNPLDVSSYEFEKKAEAFALPRGPVKKDPLEEMLQYVPV
APKAKTVKDTVATTKKAPKMSEDQFEILFKKVAEGSKVKDDFAEFLCDDLDIPVVKNDKDLLTFAQLCASVKGKKIKIES
IRLNKDKQTNCIKGLNISYKVKKYLVWSKD

Sequences:

>Translated_350_residues
MNQKNIDIRVVFFFAILLLAGIIAFIVQLFNHVDCDDAKFYIFADHSQSEESIEFYDKTPNAKSWIWDFGDGSEKDVRKH
TFHIYKNPGKYYVSLTINGNCTHTKEITIKDKFAADKIGTPKIIVPKTITVGQPAYFKSISDDARTWEWAFGENKGIDET
SSNPVYSFITPGEKTITLVINGDFSRVAKKIIYVHPRVIKKTNPLDVSSYEFEKKAEAFALPRGPVKKDPLEEMLQYVPV
APKAKTVKDTVATTKKAPKMSEDQFEILFKKVAEGSKVKDDFAEFLCDDLDIPVVKNDKDLLTFAQLCASVKGKKIKIES
IRLNKDKQTNCIKGLNISYKVKKYLVWSKD
>Mature_350_residues
MNQKNIDIRVVFFFAILLLAGIIAFIVQLFNHVDCDDAKFYIFADHSQSEESIEFYDKTPNAKSWIWDFGDGSEKDVRKH
TFHIYKNPGKYYVSLTINGNCTHTKEITIKDKFAADKIGTPKIIVPKTITVGQPAYFKSISDDARTWEWAFGENKGIDET
SSNPVYSFITPGEKTITLVINGDFSRVAKKIIYVHPRVIKKTNPLDVSSYEFEKKAEAFALPRGPVKKDPLEEMLQYVPV
APKAKTVKDTVATTKKAPKMSEDQFEILFKKVAEGSKVKDDFAEFLCDDLDIPVVKNDKDLLTFAQLCASVKGKKIKIES
IRLNKDKQTNCIKGLNISYKVKKYLVWSKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39793; Mature: 39793

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS50093 PKD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQKNIDIRVVFFFAILLLAGIIAFIVQLFNHVDCDDAKFYIFADHSQSEESIEFYDKTP
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEECCCC
NAKSWIWDFGDGSEKDVRKHTFHIYKNPGKYYVSLTINGNCTHTKEITIKDKFAADKIGT
CCCCEEEECCCCCHHHHHHEEEEEEECCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCC
PKIIVPKTITVGQPAYFKSISDDARTWEWAFGENKGIDETSSNPVYSFITPGEKTITLVI
CEEEECCEEECCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEE
NGDFSRVAKKIIYVHPRVIKKTNPLDVSSYEFEKKAEAFALPRGPVKKDPLEEMLQYVPV
ECCHHHHHHHHHEECCHHCCCCCCCCCCCCCHHHHHHHEECCCCCCCCCHHHHHHHHCCC
APKAKTVKDTVATTKKAPKMSEDQFEILFKKVAEGSKVKDDFAEFLCDDLDIPVVKNDKD
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCHH
LLTFAQLCASVKGKKIKIESIRLNKDKQTNCIKGLNISYKVKKYLVWSKD
HHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHCCCCEEEEEEEEEECCC
>Mature Secondary Structure
MNQKNIDIRVVFFFAILLLAGIIAFIVQLFNHVDCDDAKFYIFADHSQSEESIEFYDKTP
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEECCCC
NAKSWIWDFGDGSEKDVRKHTFHIYKNPGKYYVSLTINGNCTHTKEITIKDKFAADKIGT
CCCCEEEECCCCCHHHHHHEEEEEEECCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCC
PKIIVPKTITVGQPAYFKSISDDARTWEWAFGENKGIDETSSNPVYSFITPGEKTITLVI
CEEEECCEEECCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEE
NGDFSRVAKKIIYVHPRVIKKTNPLDVSSYEFEKKAEAFALPRGPVKKDPLEEMLQYVPV
ECCHHHHHHHHHEECCHHCCCCCCCCCCCCCHHHHHHHEECCCCCCCCCHHHHHHHHCCC
APKAKTVKDTVATTKKAPKMSEDQFEILFKKVAEGSKVKDDFAEFLCDDLDIPVVKNDKD
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCHH
LLTFAQLCASVKGKKIKIESIRLNKDKQTNCIKGLNISYKVKKYLVWSKD
HHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA