| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301005
Identifier: 146301005
GI number: 146301005
Start: 3901691
End: 3902086
Strand: Reverse
Name: 146301005
Synonym: Fjoh_3261
Alternate gene names: NA
Gene position: 3902086-3901691 (Counterclockwise)
Preceding gene: 146301006
Following gene: 146301004
Centisome position: 64.0
GC content: 31.06
Gene sequence:
>396_bases ATGAGTTTTTTATCTAAATTACATATAGACGGAGAAGAATATAATGTTCTTGAATTTAATATTGGTTTTAAACAAGAAAT TGATACAACAAGTAAACCTACCGGTAATGCAAAAGGCGGGGTTATAAGAATGATTATTGAAGCAAGTCAGAATAGCCATT TTTTATCATGGATGTTAAATGGTGATTTAACCAAAGACGGAAAAATTGTTTTTTACAGAAGAGATGCTTTAAGTAAAATG AAAGAACTTACGTTTACTAAGGCATTTTGTGTCGGTTATGATGAACAGTTTACAAGCACTACCGAAATACCAATGAGAAT TACTATGGAGCTAGTAGCAAAAGAATTGACTTTTGGCGACGCTAAATTCTCAAACAATTGGATTGCTTTAGATTAA
Upstream 100 bases:
>100_bases GACTTCCTTTTTTGTTTTCTATTTTGAAATATCCGGTCTTCAATTCGTAAAGCACTGGATTTTCGCACTTCCTAAATTAA TCATCTAAACAAATCTACAA
Downstream 100 bases:
>100_bases TTGTTTAAAAGCTAATTAAAAACCCCAAGGACATCATTATGGCACATTTTTCAGAACAAGTACATATAACTATAGGAAGT TTTACCCAAAACGTTGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSFLSKLHIDGEEYNVLEFNIGFKQEIDTTSKPTGNAKGGVIRMIIEASQNSHFLSWMLNGDLTKDGKIVFYRRDALSKM KELTFTKAFCVGYDEQFTSTTEIPMRITMELVAKELTFGDAKFSNNWIALD
Sequences:
>Translated_131_residues MSFLSKLHIDGEEYNVLEFNIGFKQEIDTTSKPTGNAKGGVIRMIIEASQNSHFLSWMLNGDLTKDGKIVFYRRDALSKM KELTFTKAFCVGYDEQFTSTTEIPMRITMELVAKELTFGDAKFSNNWIALD >Mature_130_residues SFLSKLHIDGEEYNVLEFNIGFKQEIDTTSKPTGNAKGGVIRMIIEASQNSHFLSWMLNGDLTKDGKIVFYRRDALSKMK ELTFTKAFCVGYDEQFTSTTEIPMRITMELVAKELTFGDAKFSNNWIALD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14919; Mature: 14788
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLSKLHIDGEEYNVLEFNIGFKQEIDTTSKPTGNAKGGVIRMIIEASQNSHFLSWMLN CCCHHCEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEC GDLTKDGKIVFYRRDALSKMKELTFTKAFCVGYDEQFTSTTEIPMRITMELVAKELTFGD CCCCCCCEEEEEECHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEHHHHHHHHHCCCC AKFSNNWIALD CEECCCEEEEC >Mature Secondary Structure SFLSKLHIDGEEYNVLEFNIGFKQEIDTTSKPTGNAKGGVIRMIIEASQNSHFLSWMLN CCHHCEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEC GDLTKDGKIVFYRRDALSKMKELTFTKAFCVGYDEQFTSTTEIPMRITMELVAKELTFGD CCCCCCCEEEEEECHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEHHHHHHHHHCCCC AKFSNNWIALD CEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA