Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300604

Identifier: 146300604

GI number: 146300604

Start: 3385710

End: 3386105

Strand: Reverse

Name: 146300604

Synonym: Fjoh_2854

Alternate gene names: NA

Gene position: 3386105-3385710 (Counterclockwise)

Preceding gene: 146300606

Following gene: 146300602

Centisome position: 55.54

GC content: 32.07

Gene sequence:

>396_bases
ATGACAGAGAAGAAAATACATCAAGGCAGAAATATAAAACGTTTCCGTGAAATGCTGGGCATTAAACAAGAAGCCCTTGC
CTTTGAATTGGGTGAAGACTGGAGTCAAAAGAAAATCTCTATTTTGGAGCAAAAAGAATTGATTGAAACTGATATTTTAG
CTCAGGTTGCTAAAATTCTTAAAGTTCCTGTTCAAGCTATCGAAAATTTTGATGAAGAACAAGCAATAAATATTATATCA
AATAATGCTTCTTTTGATAATTGTCAACAACCTGCTTTTTTTAACAATCAACCTACATTCAACCCTATTGATAAAATGGT
AGAGCTTTATGAGCGTATGTTATTGCAGCAAAAGGAAATGATTGATAAATTGGAAAAGCTGATTCAGAACAAGTAA

Upstream 100 bases:

>100_bases
AACCCAGTTAAGAACAAATTGATATATAAATAAATGAAAAAATATGTTTTAATTATTTTAAGTAAAAATCCTATATTTGA
CATTTACGATACATATCAAT

Downstream 100 bases:

>100_bases
ACAATATACTTCATAAAAAAAGCATCACATTATGTGATGCTTTAAATTTCTCGTATTTGAAAAATTATTTTATTTTTTTC
AAATAAACGGATTTTCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Xin-Antitoxin System Antitoxin Component Xre Family; Helix-Turn-Helix Domain Protein; Helix-TurN-Helix Domain Protein; HTH_3 Family Transcriptional Regulator Protein; XRE Family Plasmid Maintenance System Antidote Protein

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTEKKIHQGRNIKRFREMLGIKQEALAFELGEDWSQKKISILEQKELIETDILAQVAKILKVPVQAIENFDEEQAINIIS
NNASFDNCQQPAFFNNQPTFNPIDKMVELYERMLLQQKEMIDKLEKLIQNK

Sequences:

>Translated_131_residues
MTEKKIHQGRNIKRFREMLGIKQEALAFELGEDWSQKKISILEQKELIETDILAQVAKILKVPVQAIENFDEEQAINIIS
NNASFDNCQQPAFFNNQPTFNPIDKMVELYERMLLQQKEMIDKLEKLIQNK
>Mature_130_residues
TEKKIHQGRNIKRFREMLGIKQEALAFELGEDWSQKKISILEQKELIETDILAQVAKILKVPVQAIENFDEEQAINIISN
NASFDNCQQPAFFNNQPTFNPIDKMVELYERMLLQQKEMIDKLEKLIQNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15379; Mature: 15248

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKKIHQGRNIKRFREMLGIKQEALAFELGEDWSQKKISILEQKELIETDILAQVAKIL
CCCHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVPVQAIENFDEEQAINIISNNASFDNCQQPAFFNNQPTFNPIDKMVELYERMLLQQKEM
HHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IDKLEKLIQNK
HHHHHHHHCCC
>Mature Secondary Structure 
TEKKIHQGRNIKRFREMLGIKQEALAFELGEDWSQKKISILEQKELIETDILAQVAKIL
CCHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVPVQAIENFDEEQAINIISNNASFDNCQQPAFFNNQPTFNPIDKMVELYERMLLQQKEM
HHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IDKLEKLIQNK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA