| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is bcr [H]
Identifier: 146300602
GI number: 146300602
Start: 3383856
End: 3385085
Strand: Reverse
Name: bcr [H]
Synonym: Fjoh_2852
Alternate gene names: 146300602
Gene position: 3385085-3383856 (Counterclockwise)
Preceding gene: 146300604
Following gene: 146300597
Centisome position: 55.52
GC content: 34.31
Gene sequence:
>1230_bases ATGACAACAAAAAAATACCTCAAACTCATTCTCATTTTAGGTTCTTTAACCGCTCTTGGTCCTTTTTCAATCGATATGTA CTTACCTGGATTCTCTGGTATTGCAAAAGATTTGAATACTTCGGTAGCCAAAGTTTCGATGAGTTTATCTAGTTATTTCA TTGGAATTTCAGCTGGACAGCTGCTTTACGGCCCATTATTAGACCGTTTTGGACGCAAAAAACCATTGTTTCTTGGTTTA ATGGTTTATATTTTAGCTTCTTTGGGCTGTTCGTATGTAACTGATATCGATACATTTATTTTCTTGCGTTTTATTCAGGC TATCGGAAGCTGTGCCGCAACAGTTGCTTCTGTAGCAATGGTTCGTGATTTATTTCCTGTAAAAGATATTCCAAAAGTAT TTTCATTGTTAATGCTTGTTTTAGGGCTTTCGCCGATGCTGGCGCCTACAATTGGCGGTTATGTTACCGAAGATTATGGC TGGCATACTGTATTTTCTATACTTATGTTTATGGGAATTGCTATTTTGATTGCTGCTCAAATTGGTTTGCCAAATAGTTA CAAACCAGACACTTCAATATCATTAAAACCAAAACCAATTATTTCGAACTTTTTAAAAGTTCTTAAAGAACCACAATTTT ATACATATGCATTTACCGGAGCAATCGCATTTTCGGGATTATTTACGTATGTAGCGGCCTCTCCTATCATTTTTATGGAT ATTTATCATGTTGATGCTAAAACTTATGGATGGATTTTTGCCTTTATGTCTGTAAGTTTTATTGGTTCAAGTCAGTTAAA TTCTGTTTTATTAAAGAGATTTTCAAGTGAACAGATGATTTTTGGAGCATTAATCCTGCAGTCTGTCGTTAGTATTATTT TCCTAATACTTTCTTTAAACAATTTATTGGGCTTATATGAAACTATAGCAATCCTGTTTATTTTTCTGGGTTGTTTAGGA ATTTCAAACCCTAATACTGCTGGGCTTACAATGGCTCCTTTTGCAAAAAATGCAGGAAGTGCTTCGGCTTTAATGGGCGC AATTCAGTTAGGATTAGGATCTTTGGCCTCATTTGCTGTTGGAATTTTTGTAAAGGATTCTGTAGCGCCTATGGTTCTTA TTATGACTGTAACTACAATTATTGCCTTTATAGTTTTAAATATCGGAAAAAGATTTATCAAAAATAAAGTAGAAATAGCT GCTGATGATGACACTATACTTGCTCATTAA
Upstream 100 bases:
>100_bases AGCTTGTATAATACCCAGTTTTGATAAAGGATAATTAATATACCTAACAAGATACTAAATATTTATCTTTGCAGGAAATT ATAAGCCTCTTTTTAATAAA
Downstream 100 bases:
>100_bases TGAGTAAAAATTTCAATAAAAAAGCCAGAATCAAAAATTCTGGCTTTTTTTATAGTATCTCAATCTATTGGAATTTCTTA TTTCTCCTGAGATCTTTTAT
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MTTKKYLKLILILGSLTALGPFSIDMYLPGFSGIAKDLNTSVAKVSMSLSSYFIGISAGQLLYGPLLDRFGRKKPLFLGL MVYILASLGCSYVTDIDTFIFLRFIQAIGSCAATVASVAMVRDLFPVKDIPKVFSLLMLVLGLSPMLAPTIGGYVTEDYG WHTVFSILMFMGIAILIAAQIGLPNSYKPDTSISLKPKPIISNFLKVLKEPQFYTYAFTGAIAFSGLFTYVAASPIIFMD IYHVDAKTYGWIFAFMSVSFIGSSQLNSVLLKRFSSEQMIFGALILQSVVSIIFLILSLNNLLGLYETIAILFIFLGCLG ISNPNTAGLTMAPFAKNAGSASALMGAIQLGLGSLASFAVGIFVKDSVAPMVLIMTVTTIIAFIVLNIGKRFIKNKVEIA ADDDTILAH
Sequences:
>Translated_409_residues MTTKKYLKLILILGSLTALGPFSIDMYLPGFSGIAKDLNTSVAKVSMSLSSYFIGISAGQLLYGPLLDRFGRKKPLFLGL MVYILASLGCSYVTDIDTFIFLRFIQAIGSCAATVASVAMVRDLFPVKDIPKVFSLLMLVLGLSPMLAPTIGGYVTEDYG WHTVFSILMFMGIAILIAAQIGLPNSYKPDTSISLKPKPIISNFLKVLKEPQFYTYAFTGAIAFSGLFTYVAASPIIFMD IYHVDAKTYGWIFAFMSVSFIGSSQLNSVLLKRFSSEQMIFGALILQSVVSIIFLILSLNNLLGLYETIAILFIFLGCLG ISNPNTAGLTMAPFAKNAGSASALMGAIQLGLGSLASFAVGIFVKDSVAPMVLIMTVTTIIAFIVLNIGKRFIKNKVEIA ADDDTILAH >Mature_408_residues TTKKYLKLILILGSLTALGPFSIDMYLPGFSGIAKDLNTSVAKVSMSLSSYFIGISAGQLLYGPLLDRFGRKKPLFLGLM VYILASLGCSYVTDIDTFIFLRFIQAIGSCAATVASVAMVRDLFPVKDIPKVFSLLMLVLGLSPMLAPTIGGYVTEDYGW HTVFSILMFMGIAILIAAQIGLPNSYKPDTSISLKPKPIISNFLKVLKEPQFYTYAFTGAIAFSGLFTYVAASPIIFMDI YHVDAKTYGWIFAFMSVSFIGSSQLNSVLLKRFSSEQMIFGALILQSVVSIIFLILSLNNLLGLYETIAILFIFLGCLGI SNPNTAGLTMAPFAKNAGSASALMGAIQLGLGSLASFAVGIFVKDSVAPMVLIMTVTTIIAFIVLNIGKRFIKNKVEIAA DDDTILAH
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=374, Percent_Identity=28.8770053475936, Blast_Score=185, Evalue=4e-48, Organism=Escherichia coli, GI48994889, Length=392, Percent_Identity=28.5714285714286, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI1790146, Length=383, Percent_Identity=28.1984334203655, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1790794, Length=271, Percent_Identity=23.6162361623616, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI87082312, Length=353, Percent_Identity=24.0793201133144, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787065, Length=331, Percent_Identity=24.1691842900302, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1790195, Length=153, Percent_Identity=29.4117647058824, Blast_Score=66, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6319480, Length=265, Percent_Identity=21.8867924528302, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44148; Mature: 44017
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKKYLKLILILGSLTALGPFSIDMYLPGFSGIAKDLNTSVAKVSMSLSSYFIGISAGQ CCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCH LLYGPLLDRFGRKKPLFLGLMVYILASLGCSYVTDIDTFIFLRFIQAIGSCAATVASVAM HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRDLFPVKDIPKVFSLLMLVLGLSPMLAPTIGGYVTEDYGWHTVFSILMFMGIAILIAAQ HHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IGLPNSYKPDTSISLKPKPIISNFLKVLKEPQFYTYAFTGAIAFSGLFTYVAASPIIFMD CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCEEEEE IYHVDAKTYGWIFAFMSVSFIGSSQLNSVLLKRFSSEQMIFGALILQSVVSIIFLILSLN EEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH NLLGLYETIAILFIFLGCLGISNPNTAGLTMAPFAKNAGSASALMGAIQLGLGSLASFAV HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH GIFVKDSVAPMVLIMTVTTIIAFIVLNIGKRFIKNKVEIAADDDTILAH HHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEECC >Mature Secondary Structure TTKKYLKLILILGSLTALGPFSIDMYLPGFSGIAKDLNTSVAKVSMSLSSYFIGISAGQ CHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCH LLYGPLLDRFGRKKPLFLGLMVYILASLGCSYVTDIDTFIFLRFIQAIGSCAATVASVAM HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRDLFPVKDIPKVFSLLMLVLGLSPMLAPTIGGYVTEDYGWHTVFSILMFMGIAILIAAQ HHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH IGLPNSYKPDTSISLKPKPIISNFLKVLKEPQFYTYAFTGAIAFSGLFTYVAASPIIFMD CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCEEEEE IYHVDAKTYGWIFAFMSVSFIGSSQLNSVLLKRFSSEQMIFGALILQSVVSIIFLILSLN EEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH NLLGLYETIAILFIFLGCLGISNPNTAGLTMAPFAKNAGSASALMGAIQLGLGSLASFAV HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH GIFVKDSVAPMVLIMTVTTIIAFIVLNIGKRFIKNKVEIAADDDTILAH HHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]