| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yycE [H]
Identifier: 146300586
GI number: 146300586
Start: 3368578
End: 3368970
Strand: Reverse
Name: yycE [H]
Synonym: Fjoh_2836
Alternate gene names: 146300586
Gene position: 3368970-3368578 (Counterclockwise)
Preceding gene: 146300587
Following gene: 146300585
Centisome position: 55.26
GC content: 33.33
Gene sequence:
>393_bases ATGTTTTTACGAGTTGCCAGACATACGAATGATTTAAAGAAAATCGAGGATTTTTACGTTAATATCCTTGGATTTGAACT CTTAGGAGGTTTTGATAACCACAATAATTACGACGGAATTTTTATTGGAAAATCAGGACTTGACTGGCATTTCGAATTTA CACAATCTAATACAAAAGCAAAACATTCGTTTGACGAAGATGACATTACGGTGCTTTACCCTAAGAGCATTTTAGATTAT AACGAGTTAATTAAGAAAATTTCACACCAAAATATTGAAACGATAGCGGCAGTTAATCCTTTTTGGAACGAAAATGGAAC CATGATTCAGGATCCGGACGGTTATCGCATCATTATATCACCATTAAAAGCTGTAATAAGCGAAATAGAATAA
Upstream 100 bases:
>100_bases AAGATCCTTATAAAGCAGTAGACCAATTAATTACATATACATTAAATAAATTGGCAGGGAATTAATTAGAAAAATTGATA ATTTTTAAAATCTAAAATTT
Downstream 100 bases:
>100_bases TGCAGGAAACACATAAAAAAATATTATTTAAATATTATAGTGATTATTTAGAAGAAACGGTTTCAGAAACCATGTGGGCC GAAATTGTTGATTTAGAAAA
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MFLRVARHTNDLKKIEDFYVNILGFELLGGFDNHNNYDGIFIGKSGLDWHFEFTQSNTKAKHSFDEDDITVLYPKSILDY NELIKKISHQNIETIAAVNPFWNENGTMIQDPDGYRIIISPLKAVISEIE
Sequences:
>Translated_130_residues MFLRVARHTNDLKKIEDFYVNILGFELLGGFDNHNNYDGIFIGKSGLDWHFEFTQSNTKAKHSFDEDDITVLYPKSILDY NELIKKISHQNIETIAAVNPFWNENGTMIQDPDGYRIIISPLKAVISEIE >Mature_130_residues MFLRVARHTNDLKKIEDFYVNILGFELLGGFDNHNNYDGIFIGKSGLDWHFEFTQSNTKAKHSFDEDDITVLYPKSILDY NELIKKISHQNIETIAAVNPFWNENGTMIQDPDGYRIIISPLKAVISEIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 15023; Mature: 15023
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLRVARHTNDLKKIEDFYVNILGFELLGGFDNHNNYDGIFIGKSGLDWHFEFTQSNTKA CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCCCCC KHSFDEDDITVLYPKSILDYNELIKKISHQNIETIAAVNPFWNENGTMIQDPDGYRIIIS CCCCCCCCEEEECCHHHCCHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCEEEHH PLKAVISEIE HHHHHHHHCC >Mature Secondary Structure MFLRVARHTNDLKKIEDFYVNILGFELLGGFDNHNNYDGIFIGKSGLDWHFEFTQSNTKA CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCCCCC KHSFDEDDITVLYPKSILDYNELIKKISHQNIETIAAVNPFWNENGTMIQDPDGYRIIIS CCCCCCCCEEEECCHHHCCHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCEEEHH PLKAVISEIE HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1312531; 7584024; 9384377 [H]