| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300550
Identifier: 146300550
GI number: 146300550
Start: 3333276
End: 3333953
Strand: Reverse
Name: 146300550
Synonym: Fjoh_2800
Alternate gene names: NA
Gene position: 3333953-3333276 (Counterclockwise)
Preceding gene: 146300551
Following gene: 146300549
Centisome position: 54.68
GC content: 32.3
Gene sequence:
>678_bases ATGAAACCTCTTGAATCTATATTAAAAGCCTTACCACCTACTAAAATTATTGATGCCTCTATTGATTTTTCAAAATATCT TCCTTTAGATTTATCTATAACGAATACAGAATTAGTCGAAAGTAAACCTGAAACATCTGATGATTTTGAGCGGTTTATTT TTGGATATTTAGCAGATAATAATGCAGAGGTTGCTTATGGCGGTTACATTGAAGGACGTAACTTATATAAAAGGAGCACA ATTTTTAAAAACGATTCTATTGCCGAAAGAAATATTCATATCGGCCTTGATTTATGGGCAAAAGCCGGAACTGCTGTTTT AGCACCGCTTGATGGAAAAGTACACAGTTTTCAAAATAATGAAGGTCTTGGAGACTATGGTCCTACTATAATATTAGAAC ATAAAGCTGAAAATGAAAAATTTTATACTTTATATGGACATTTATCGTTAGAAAGTATAGAAAACCTTACCGTTGGGACA ATTTTTAAAAAAGGCAGTCAAATTGCCACATTAGGAAATTCAACTGTTAACGGAGATTATGCACCCCATGTTCACTTTCA GATTATAAAAAACATGGAAGACAAATGGGGCGATTATCCCGGAGTCTGCAATACAAACGATTTGAATTTTTATATAGAAA ATTGCCCCGACCCTAACTTATTATTAAAAATAACTTAA
Upstream 100 bases:
>100_bases CTGAAATAAATCCAGAATTGTTTACTTCAAAAATGCTGCCCCGCATAGAAGTGCATAATGAACTAATAATAATCGAAAAG CTGCCTTAAATATTATCTTT
Downstream 100 bases:
>100_bases ATGATTATGAAGAAAGCGGGATTGATTATATGTTTGCTGTTATTATTAATTGGATGTAAATCTAAAACTGTAAGCAGAGA TACTGAAGATTTAAAAATTA
Product: peptidase M23B
Products: NA
Alternate protein names: Aminotransferase Class III Family; Aminotransferase Class-III; M23/M37 Peptidase/Aminotransferase Class III; M23 Family Peptidase; Peptidase Family M; With Aminotransferase Class-III Domain Protein; Peptidase; Class III Aminotransferase
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MKPLESILKALPPTKIIDASIDFSKYLPLDLSITNTELVESKPETSDDFERFIFGYLADNNAEVAYGGYIEGRNLYKRST IFKNDSIAERNIHIGLDLWAKAGTAVLAPLDGKVHSFQNNEGLGDYGPTIILEHKAENEKFYTLYGHLSLESIENLTVGT IFKKGSQIATLGNSTVNGDYAPHVHFQIIKNMEDKWGDYPGVCNTNDLNFYIENCPDPNLLLKIT
Sequences:
>Translated_225_residues MKPLESILKALPPTKIIDASIDFSKYLPLDLSITNTELVESKPETSDDFERFIFGYLADNNAEVAYGGYIEGRNLYKRST IFKNDSIAERNIHIGLDLWAKAGTAVLAPLDGKVHSFQNNEGLGDYGPTIILEHKAENEKFYTLYGHLSLESIENLTVGT IFKKGSQIATLGNSTVNGDYAPHVHFQIIKNMEDKWGDYPGVCNTNDLNFYIENCPDPNLLLKIT >Mature_225_residues MKPLESILKALPPTKIIDASIDFSKYLPLDLSITNTELVESKPETSDDFERFIFGYLADNNAEVAYGGYIEGRNLYKRST IFKNDSIAERNIHIGLDLWAKAGTAVLAPLDGKVHSFQNNEGLGDYGPTIILEHKAENEKFYTLYGHLSLESIENLTVGT IFKKGSQIATLGNSTVNGDYAPHVHFQIIKNMEDKWGDYPGVCNTNDLNFYIENCPDPNLLLKIT
Specific function: Unknown
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25137; Mature: 25137
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLESILKALPPTKIIDASIDFSKYLPLDLSITNTELVESKPETSDDFERFIFGYLADN CCHHHHHHHHCCCCEEEECCCCHHHCCCEEEEECCHHHHCCCCCCCHHHHHHEEEEEECC NAEVAYGGYIEGRNLYKRSTIFKNDSIAERNIHIGLDLWAKAGTAVLAPLDGKVHSFQNN CCEEEECCEECCCCEEEHHEEECCCCCCCCEEEEEEEEECCCCCEEEEECCCCEEECCCC EGLGDYGPTIILEHKAENEKFYTLYGHLSLESIENLTVGTIFKKGSQIATLGNSTVNGDY CCCCCCCCEEEEEECCCCCEEEEEEEEEEHHHHCCCEEEEEECCCCEEEEECCCCCCCCC APHVHFQIIKNMEDKWGDYPGVCNTNDLNFYIENCPDPNLLLKIT CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEC >Mature Secondary Structure MKPLESILKALPPTKIIDASIDFSKYLPLDLSITNTELVESKPETSDDFERFIFGYLADN CCHHHHHHHHCCCCEEEECCCCHHHCCCEEEEECCHHHHCCCCCCCHHHHHHEEEEEECC NAEVAYGGYIEGRNLYKRSTIFKNDSIAERNIHIGLDLWAKAGTAVLAPLDGKVHSFQNN CCEEEECCEECCCCEEEHHEEECCCCCCCCEEEEEEEEECCCCCEEEEECCCCEEECCCC EGLGDYGPTIILEHKAENEKFYTLYGHLSLESIENLTVGTIFKKGSQIATLGNSTVNGDY CCCCCCCCEEEEEECCCCCEEEEEEEEEEHHHHCCCEEEEEECCCCEEEEECCCCCCCCC APHVHFQIIKNMEDKWGDYPGVCNTNDLNFYIENCPDPNLLLKIT CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA