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The map label for this gene is ydiU [C]

Identifier: 146300543

GI number: 146300543

Start: 3325866

End: 3327434

Strand: Reverse

Name: ydiU [C]

Synonym: Fjoh_2793

Alternate gene names: 146300543

Gene position: 3327434-3325866 (Counterclockwise)

Preceding gene: 146300544

Following gene: 146300540

Centisome position: 54.58

GC content: 35.12

Gene sequence:

>1569_bases
ATGAAAAATTTAAAAATAAATAATCGATTTACTGCCGAATTACCTGCAGATCCTGACTTAACGAATGAAACTCGTCAGGT
GAAGAATACGGCGTTTTCGTATGTAAATCCAACAAAACCTTCAAATCCAAAACTAATTCACGCTTCTGAAGAAACAGCGG
CATTAGTTGGTATTTCAAAAGAAGAAATCCATTCTGAAGAATTTTTGAATGTTTTTTCAGGAAAAGAAATTCTTCCTGAA
ACGCAGCCTTATGCAATGTGTTATGCCGGACATCAGTTTGGTAATTGGGCAGGACAGTTAGGAGACGGCCGCGCAATCAA
TTTAACTGAAGTTGAAAATAACAATACATTTTATACGCTTCAATTAAAAGGCGCAGGAAAGACTCCCTATTCCAGAACTG
CTGACGGTTTAGCTGTCTTGCGTTCTTCGATACGAGAATATTTATGCGCCGAAGCGATGTATCATTTAGGTGTTCCCACA
ACCCGATCACTTTCATTAATACTTTCCGGAGATCAGGTTTTGCGTGATATTTTATATAATGGTAATCCTGCCTATGAAAA
AGGTGCTGTTGTTTGCCGCGTTGCTCCTTCGTTTATTCGCTTTGGAAGTTTTGAAATGCTGGCTGCCCGAAATGAGCTTA
AAAATTTAAAACAGTTTGTAGAATATACCATCAAACATTATTTCCCTGAAATTACAGGCGAACCCAAAGAGCAGTATTTA
CAATTCTTTAAAAAAGTGGCTGATACGACACGCGAAATGATTTTGCATTGGCAGCGAGTTGGTTTCGTTCATGGTGTTAT
GAATACTGATAATATGTCGGTTCACGGAATTACAATTGATTACGGACCTTATGGCTGGCTTGAAAATTACGATCCAAACT
GGACTCCAAATACGACAGACAGCCAGAACAAGAGATATCGTTTTGGAAATCAGCCGCAAGTTGCACATTGGAATTTATAC
CAATTGGCAAATGCTATTTATCCTTTAATTAATGAAACCGAAGGATTAGAAAAAATCTTAGAATCATTTATGGATGATTT
TATTTTAGATTATAAAGAAATGTTTCTAAACAAATTAGGGCTCTTTACTTCAACAGAAACTGATAATGATTTAATCGATA
ATCTGGAAGCTGTTTTACAATTAACAGAAACTGATATGACTATCTTTTTTAGAAATTTAAGTTCTGTCAAAAAAACAGAT
TCAGTTGAAAAAGCTATTGAAAAAATTCAATTTGCTTTTTATAAAATTGAAGAAGTTTCAGGAGAAATTTTAGATGCCTG
GAAGAAATGGTTCTCTGTATATCTTGATAGATTAAATGCAGAAGTATTATCAGATGAAGTACGTTTACAAAAAATGAACT
TAATTAATCCGAAATATGTACTTCGAAATTATATGGCGCAATTAGCTATTGATGCTGCTGATAAAGAAGATTATTCGTTG
GTAAATGAACTTTATACTTTACTGCAAAAACCGTATGACGAACAGCCGGAATACCAAAAATGGTTTGCCAAACGACCAGA
CTGGGCAACATCTAAAGTTGGCTGTTCAATGCTTTCTTGCAGTTCCTAA

Upstream 100 bases:

>100_bases
TTTCTTTTTTTTATGCAAATAAAAGACAGATTATAGATTTAAATAGATCCGTTTGATCAGTTTTTAACCTGTCTGATCTG
TGGGCTGAACAAAAACTCAA

Downstream 100 bases:

>100_bases
GTTTTATTAGCACAAATTACACTATTTTTTTACTAATTATAAAAGGTTGTCATACCGAGCGAAGTCGAGATGCTTGTTTG
TTCTCGTCTTCGCTCGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MKNLKINNRFTAELPADPDLTNETRQVKNTAFSYVNPTKPSNPKLIHASEETAALVGISKEEIHSEEFLNVFSGKEILPE
TQPYAMCYAGHQFGNWAGQLGDGRAINLTEVENNNTFYTLQLKGAGKTPYSRTADGLAVLRSSIREYLCAEAMYHLGVPT
TRSLSLILSGDQVLRDILYNGNPAYEKGAVVCRVAPSFIRFGSFEMLAARNELKNLKQFVEYTIKHYFPEITGEPKEQYL
QFFKKVADTTREMILHWQRVGFVHGVMNTDNMSVHGITIDYGPYGWLENYDPNWTPNTTDSQNKRYRFGNQPQVAHWNLY
QLANAIYPLINETEGLEKILESFMDDFILDYKEMFLNKLGLFTSTETDNDLIDNLEAVLQLTETDMTIFFRNLSSVKKTD
SVEKAIEKIQFAFYKIEEVSGEILDAWKKWFSVYLDRLNAEVLSDEVRLQKMNLINPKYVLRNYMAQLAIDAADKEDYSL
VNELYTLLQKPYDEQPEYQKWFAKRPDWATSKVGCSMLSCSS

Sequences:

>Translated_522_residues
MKNLKINNRFTAELPADPDLTNETRQVKNTAFSYVNPTKPSNPKLIHASEETAALVGISKEEIHSEEFLNVFSGKEILPE
TQPYAMCYAGHQFGNWAGQLGDGRAINLTEVENNNTFYTLQLKGAGKTPYSRTADGLAVLRSSIREYLCAEAMYHLGVPT
TRSLSLILSGDQVLRDILYNGNPAYEKGAVVCRVAPSFIRFGSFEMLAARNELKNLKQFVEYTIKHYFPEITGEPKEQYL
QFFKKVADTTREMILHWQRVGFVHGVMNTDNMSVHGITIDYGPYGWLENYDPNWTPNTTDSQNKRYRFGNQPQVAHWNLY
QLANAIYPLINETEGLEKILESFMDDFILDYKEMFLNKLGLFTSTETDNDLIDNLEAVLQLTETDMTIFFRNLSSVKKTD
SVEKAIEKIQFAFYKIEEVSGEILDAWKKWFSVYLDRLNAEVLSDEVRLQKMNLINPKYVLRNYMAQLAIDAADKEDYSL
VNELYTLLQKPYDEQPEYQKWFAKRPDWATSKVGCSMLSCSS
>Mature_522_residues
MKNLKINNRFTAELPADPDLTNETRQVKNTAFSYVNPTKPSNPKLIHASEETAALVGISKEEIHSEEFLNVFSGKEILPE
TQPYAMCYAGHQFGNWAGQLGDGRAINLTEVENNNTFYTLQLKGAGKTPYSRTADGLAVLRSSIREYLCAEAMYHLGVPT
TRSLSLILSGDQVLRDILYNGNPAYEKGAVVCRVAPSFIRFGSFEMLAARNELKNLKQFVEYTIKHYFPEITGEPKEQYL
QFFKKVADTTREMILHWQRVGFVHGVMNTDNMSVHGITIDYGPYGWLENYDPNWTPNTTDSQNKRYRFGNQPQVAHWNLY
QLANAIYPLINETEGLEKILESFMDDFILDYKEMFLNKLGLFTSTETDNDLIDNLEAVLQLTETDMTIFFRNLSSVKKTD
SVEKAIEKIQFAFYKIEEVSGEILDAWKKWFSVYLDRLNAEVLSDEVRLQKMNLINPKYVLRNYMAQLAIDAADKEDYSL
VNELYTLLQKPYDEQPEYQKWFAKRPDWATSKVGCSMLSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family

Homologues:

Organism=Homo sapiens, GI32880229, Length=588, Percent_Identity=36.2244897959184, Blast_Score=345, Evalue=4e-95,
Organism=Escherichia coli, GI1787999, Length=489, Percent_Identity=38.6503067484663, Blast_Score=337, Evalue=9e-94,
Organism=Saccharomyces cerevisiae, GI6325034, Length=386, Percent_Identity=34.7150259067358, Blast_Score=224, Evalue=4e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2793_FLAJ1 (A5FG48)

Other databases:

- EMBL:   CP000685
- RefSeq:   YP_001195134.1
- STRING:   A5FG48
- GeneID:   5093238
- GenomeReviews:   CP000685_GR
- KEGG:   fjo:Fjoh_2793
- eggNOG:   COG0397
- HOGENOM:   HBG683993
- OMA:   FGSYNPR
- ProtClustDB:   PRK00029
- BioCyc:   FJOH376686:FJOH_2793-MONOMER
- HAMAP:   MF_00692
- InterPro:   IPR003846

Pfam domain/function: PF02696 UPF0061

EC number: NA

Molecular weight: Translated: 59930; Mature: 59930

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLKINNRFTAELPADPDLTNETRQVKNTAFSYVNPTKPSNPKLIHASEETAALVGISK
CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCH
EEIHSEEFLNVFSGKEILPETQPYAMCYAGHQFGNWAGQLGDGRAINLTEVENNNTFYTL
HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHCCCCCCCCCCCEEEEEEEECCCEEEEE
QLKGAGKTPYSRTADGLAVLRSSIREYLCAEAMYHLGVPTTRSLSLILSGDQVLRDILYN
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHC
GNPAYEKGAVVCRVAPSFIRFGSFEMLAARNELKNLKQFVEYTIKHYFPEITGEPKEQYL
CCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
QFFKKVADTTREMILHWQRVGFVHGVMNTDNMSVHGITIDYGPYGWLENYDPNWTPNTTD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC
SQNKRYRFGNQPQVAHWNLYQLANAIYPLINETEGLEKILESFMDDFILDYKEMFLNKLG
CCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
LFTSTETDNDLIDNLEAVLQLTETDMTIFFRNLSSVKKTDSVEKAIEKIQFAFYKIEEVS
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEILDAWKKWFSVYLDRLNAEVLSDEVRLQKMNLINPKYVLRNYMAQLAIDAADKEDYSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
VNELYTLLQKPYDEQPEYQKWFAKRPDWATSKVGCSMLSCSS
HHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHCCCHHCCCC
>Mature Secondary Structure
MKNLKINNRFTAELPADPDLTNETRQVKNTAFSYVNPTKPSNPKLIHASEETAALVGISK
CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCH
EEIHSEEFLNVFSGKEILPETQPYAMCYAGHQFGNWAGQLGDGRAINLTEVENNNTFYTL
HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHCCCCCCCCCCCEEEEEEEECCCEEEEE
QLKGAGKTPYSRTADGLAVLRSSIREYLCAEAMYHLGVPTTRSLSLILSGDQVLRDILYN
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHC
GNPAYEKGAVVCRVAPSFIRFGSFEMLAARNELKNLKQFVEYTIKHYFPEITGEPKEQYL
CCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
QFFKKVADTTREMILHWQRVGFVHGVMNTDNMSVHGITIDYGPYGWLENYDPNWTPNTTD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC
SQNKRYRFGNQPQVAHWNLYQLANAIYPLINETEGLEKILESFMDDFILDYKEMFLNKLG
CCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
LFTSTETDNDLIDNLEAVLQLTETDMTIFFRNLSSVKKTDSVEKAIEKIQFAFYKIEEVS
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEILDAWKKWFSVYLDRLNAEVLSDEVRLQKMNLINPKYVLRNYMAQLAIDAADKEDYSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH
VNELYTLLQKPYDEQPEYQKWFAKRPDWATSKVGCSMLSCSS
HHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA