Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is ydzA [H]

Identifier: 146300304

GI number: 146300304

Start: 3033581

End: 3033892

Strand: Direct

Name: ydzA [H]

Synonym: Fjoh_2549

Alternate gene names: 146300304

Gene position: 3033581-3033892 (Clockwise)

Preceding gene: 146300303

Following gene: 146300305

Centisome position: 49.76

GC content: 31.41

Gene sequence:

>312_bases
ATGAAAAATTTATTAAATACAAATACCGGACGATTACGAATTATTGGTTTCCTTGAAGGAACATCACTTTTAATTCTGCT
TTTTATTGCAATGCCAATGAAATATGTTTTTGAAATGCCATTTTTAACGAGACCTGTTGGGACAATTCATGGCGCTTTAT
TTCTGCTTTTTGTTTTTAACACTTTAAGTGTTGGAGTAGAGCAGAACTGGAAATTTAAGGACACAACCTGGAAAGTACTT
TTGGCCTGTGTAATTCCATTTGGTACTTTTTACATCGATTCTAAGATTTTAAGTAAAATTCAAAACCATTAA

Upstream 100 bases:

>100_bases
GAACCATGTTTTTGTGGTTTTCAATTGCTTTGATAATTATTTTTATTGCCATTCCGTGGCCATTTTCTCCTCTTGCAAGC
CGACCTTATTTTAGATAATT

Downstream 100 bases:

>100_bases
AATTTATGATTTTTGTATTCAAAACAAACGTTGACAGCATTTCGAAAGTAAAGAAAGTTACCCCAAAACTGAATCGGTTA
TTTCCCAATTCAAAATGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MKNLLNTNTGRLRIIGFLEGTSLLILLFIAMPMKYVFEMPFLTRPVGTIHGALFLLFVFNTLSVGVEQNWKFKDTTWKVL
LACVIPFGTFYIDSKILSKIQNH

Sequences:

>Translated_103_residues
MKNLLNTNTGRLRIIGFLEGTSLLILLFIAMPMKYVFEMPFLTRPVGTIHGALFLLFVFNTLSVGVEQNWKFKDTTWKVL
LACVIPFGTFYIDSKILSKIQNH
>Mature_103_residues
MKNLLNTNTGRLRIIGFLEGTSLLILLFIAMPMKYVFEMPFLTRPVGTIHGALFLLFVFNTLSVGVEQNWKFKDTTWKVL
LACVIPFGTFYIDSKILSKIQNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11797; Mature: 11797

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLLNTNTGRLRIIGFLEGTSLLILLFIAMPMKYVFEMPFLTRPVGTIHGALFLLFVFN
CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
TLSVGVEQNWKFKDTTWKVLLACVIPFGTFYIDSKILSKIQNH
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNLLNTNTGRLRIIGFLEGTSLLILLFIAMPMKYVFEMPFLTRPVGTIHGALFLLFVFN
CCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
TLSVGVEQNWKFKDTTWKVLLACVIPFGTFYIDSKILSKIQNH
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]