Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300288

Identifier: 146300288

GI number: 146300288

Start: 3016619

End: 3017104

Strand: Direct

Name: 146300288

Synonym: Fjoh_2533

Alternate gene names: NA

Gene position: 3016619-3017104 (Clockwise)

Preceding gene: 146300287

Following gene: 146300289

Centisome position: 49.48

GC content: 32.92

Gene sequence:

>486_bases
ATGAATTTAGACAAAATTTTAGCCATTTCTGGGAAACCAGGTTTATATGTATTGAAAGTGCAGACTCGTACAGGTTTTGT
GGCAGAATCATTATTAGATGGAAAAAAAATCACAGTAAACTTAAAAAGTAACGTAAGTTTATTATCTGAAATTTCAATTT
ATACATACGAAGGTGAAAAACCATTGACTGAAGTAATGCAAAAAATTGCAGTAAAAGAAAACAAAGGTCAGGCTATTTCT
CATAAGGAAGATAATGCAACTTTAAGTGCTTACTTCAAAGAAATTTTGCCAGAATATGATGAAGAAAGAGTTTATCCTTC
AGATATTAAAAAAGTATTAAACTGGTACAATACACTTCAGGCTAAAGGTTTAGTAACAGATTTAGCTCCGGCTGCTGCTG
AAACTCCGGAAGAAGCTCCTGCTGCTGAAGAAAAACCAAAAAAAGCGCCAGCTGCTAAAAAAGCAAAAGCTAAAAAAGAA
GAATAG

Upstream 100 bases:

>100_bases
ATACAGAATGAAATTTGCAGCCGCTAAAAAAGGCAGATAATGTTCTAAAAAAAGAACATCAAAAAAATACTAGAAATTCT
TAATACTAATTTTAATAAAC

Downstream 100 bases:

>100_bases
CAGTTTACTGCATTCAAAATATATTAATCCTGTTAAGATGTTTTCTTGACAGGATTTTTTACTTTTACATATTCGGTTAC
AATATCAAAAATACTTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MNLDKILAISGKPGLYVLKVQTRTGFVAESLLDGKKITVNLKSNVSLLSEISIYTYEGEKPLTEVMQKIAVKENKGQAIS
HKEDNATLSAYFKEILPEYDEERVYPSDIKKVLNWYNTLQAKGLVTDLAPAAAETPEEAPAAEEKPKKAPAAKKAKAKKE
E

Sequences:

>Translated_161_residues
MNLDKILAISGKPGLYVLKVQTRTGFVAESLLDGKKITVNLKSNVSLLSEISIYTYEGEKPLTEVMQKIAVKENKGQAIS
HKEDNATLSAYFKEILPEYDEERVYPSDIKKVLNWYNTLQAKGLVTDLAPAAAETPEEAPAAEEKPKKAPAAKKAKAKKE
E
>Mature_161_residues
MNLDKILAISGKPGLYVLKVQTRTGFVAESLLDGKKITVNLKSNVSLLSEISIYTYEGEKPLTEVMQKIAVKENKGQAIS
HKEDNATLSAYFKEILPEYDEERVYPSDIKKVLNWYNTLQAKGLVTDLAPAAAETPEEAPAAEEKPKKAPAAKKAKAKKE
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17765; Mature: 17765

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDKILAISGKPGLYVLKVQTRTGFVAESLLDGKKITVNLKSNVSLLSEISIYTYEGEK
CCCCCEEEECCCCCEEEEEEECCCCHHHHHHCCCCEEEEEECCCHHHHHHEEEEEECCCC
PLTEVMQKIAVKENKGQAISHKEDNATLSAYFKEILPEYDEERVYPSDIKKVLNWYNTLQ
CHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
AKGLVTDLAPAAAETPEEAPAAEEKPKKAPAAKKAKAKKEE
HCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MNLDKILAISGKPGLYVLKVQTRTGFVAESLLDGKKITVNLKSNVSLLSEISIYTYEGEK
CCCCCEEEECCCCCEEEEEEECCCCHHHHHHCCCCEEEEEECCCHHHHHHEEEEEECCCC
PLTEVMQKIAVKENKGQAISHKEDNATLSAYFKEILPEYDEERVYPSDIKKVLNWYNTLQ
CHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
AKGLVTDLAPAAAETPEEAPAAEEKPKKAPAAKKAKAKKEE
HCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA