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The map label for this gene is ygeA [H]

Identifier: 146300252

GI number: 146300252

Start: 2984744

End: 2985436

Strand: Direct

Name: ygeA [H]

Synonym: Fjoh_2497

Alternate gene names: 146300252

Gene position: 2984744-2985436 (Clockwise)

Preceding gene: 146300251

Following gene: 146300256

Centisome position: 48.96

GC content: 31.75

Gene sequence:

>693_bases
ATGAAAAAAATTGGACTTATTGGCGGTATAAGCTGGGTTTCGACTACAGATTATTATAAACTTATAAATCTTGGAATAAA
CGAAAAACTAGGAGGTTTAAACTTTTCTGAATGTTTAGTTTACTCTTTCAATTATGCTGATATTAAAAAGAATAACGATA
ACAACGATTGGGATTCTACTTTTAAGATGCTTTTTAAAGGTTGTGAATTTTTAAAATCGGGCGGGGCAGAAGCTATTGTT
TTATGCGCCAATACGATGCATTTAATTGCAGATAAACTTCAGGAAGCAATTGGTCTTCCGGTCATTCATATTGCTGCCGA
AACAGCGATTGAAATTCAAAAACAGAATCTTAAAAAAGTAGGTTTATTGGGAACTAAGTTTACAATGGAGCTTGATTTTT
TTAAAGATAAATTAAAACAAAAAGGAATTGAAGCTGTAATTCCAGCCAGTCAGGAAGATAAAGATTTTGTTCATTATACT
ATTTTTGAAGAACTGGGAAGAGGAATTGTGACAGATGAAACAAAGAAACGTTATCTTGAAATTGCAGACGAATTAATTAA
AAATGGAGCAGAAGGTATTATTTTAGGATGTACAGAAATTCCGTTAGTAATAAAAGAAGGCGATTTATCTGTTCCTATTT
TTGATACGACTTTAATACACGCAAAAGCGGCTGTTGAATTTCAGTTGTCTTAA

Upstream 100 bases:

>100_bases
ATTTCAGGCTGTGAAAACAAAAGACGGCGAAAAGCTTTTTATGAAATGGATTTTTATAAAAGGAATTAGAGAGATTGGAT
AAAATTTTTAAATCAGCAAT

Downstream 100 bases:

>100_bases
ATAAAAAAGCCCTGAATTTTTAAATTCAGGGCTTTTTTTATGAATTAAAACGTTACTTTTTTGGAGCTTGGTTTATGATT
TCAGGTACAATTGTTTTTTT

Product: aspartate racemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKKIGLIGGISWVSTTDYYKLINLGINEKLGGLNFSECLVYSFNYADIKKNNDNNDWDSTFKMLFKGCEFLKSGGAEAIV
LCANTMHLIADKLQEAIGLPVIHIAAETAIEIQKQNLKKVGLLGTKFTMELDFFKDKLKQKGIEAVIPASQEDKDFVHYT
IFEELGRGIVTDETKKRYLEIADELIKNGAEGIILGCTEIPLVIKEGDLSVPIFDTTLIHAKAAVEFQLS

Sequences:

>Translated_230_residues
MKKIGLIGGISWVSTTDYYKLINLGINEKLGGLNFSECLVYSFNYADIKKNNDNNDWDSTFKMLFKGCEFLKSGGAEAIV
LCANTMHLIADKLQEAIGLPVIHIAAETAIEIQKQNLKKVGLLGTKFTMELDFFKDKLKQKGIEAVIPASQEDKDFVHYT
IFEELGRGIVTDETKKRYLEIADELIKNGAEGIILGCTEIPLVIKEGDLSVPIFDTTLIHAKAAVEFQLS
>Mature_230_residues
MKKIGLIGGISWVSTTDYYKLINLGINEKLGGLNFSECLVYSFNYADIKKNNDNNDWDSTFKMLFKGCEFLKSGGAEAIV
LCANTMHLIADKLQEAIGLPVIHIAAETAIEIQKQNLKKVGLLGTKFTMELDFFKDKLKQKGIEAVIPASQEDKDFVHYT
IFEELGRGIVTDETKKRYLEIADELIKNGAEGIILGCTEIPLVIKEGDLSVPIFDTTLIHAKAAVEFQLS

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=231, Percent_Identity=41.991341991342, Blast_Score=192, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 25555; Mature: 25555

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGLIGGISWVSTTDYYKLINLGINEKLGGLNFSECLVYSFNYADIKKNNDNNDWDST
CCCCCEEECCHHHCCCHHHHEEECCCCCCCCCCCHHHHEEEECCCCEEECCCCCCCHHHH
FKMLFKGCEFLKSGGAEAIVLCANTMHLIADKLQEAIGLPVIHIAAETAIEIQKQNLKKV
HHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH
GLLGTKFTMELDFFKDKLKQKGIEAVIPASQEDKDFVHYTIFEELGRGIVTDETKKRYLE
CCCCCEEEEEHHHHHHHHHHCCCEEECCCCCCCCCHHEEHHHHHHCCCCCCCHHHHHHHH
IADELIKNGAEGIILGCTEIPLVIKEGDLSVPIFDTTLIHAKAAVEFQLS
HHHHHHHCCCCEEEEEECCCCEEEECCCCCCEEECHHEEEEEEEEEEEEC
>Mature Secondary Structure
MKKIGLIGGISWVSTTDYYKLINLGINEKLGGLNFSECLVYSFNYADIKKNNDNNDWDST
CCCCCEEECCHHHCCCHHHHEEECCCCCCCCCCCHHHHEEEECCCCEEECCCCCCCHHHH
FKMLFKGCEFLKSGGAEAIVLCANTMHLIADKLQEAIGLPVIHIAAETAIEIQKQNLKKV
HHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH
GLLGTKFTMELDFFKDKLKQKGIEAVIPASQEDKDFVHYTIFEELGRGIVTDETKKRYLE
CCCCCEEEEEHHHHHHHHHHCCCEEECCCCCCCCCHHEEHHHHHHCCCCCCCHHHHHHHH
IADELIKNGAEGIILGCTEIPLVIKEGDLSVPIFDTTLIHAKAAVEFQLS
HHHHHHHCCCCEEEEEECCCCEEEECCCCCCEEECHHEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]