| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is pyrG
Identifier: 146300138
GI number: 146300138
Start: 2855557
End: 2857170
Strand: Direct
Name: pyrG
Synonym: Fjoh_2383
Alternate gene names: 146300138
Gene position: 2855557-2857170 (Clockwise)
Preceding gene: 146300137
Following gene: 146300139
Centisome position: 46.84
GC content: 35.19
Gene sequence:
>1614_bases ATGAATCAAACAAAATATATTTTTGTTACAGGCGGTGTGACTTCTTCATTAGGAAAAGGGATCATTGCAGCATCTTTAGC AAAATTGTTACAAGGAAGAGGATACCGTACAACTATTCAAAAATTTGATCCGTATATTAATGTGGATCCGGGAACACTAA ACCCGTATGAGCACGGAGAATGTTATGTAACAGATGATGGTGCAGAAACAGATTTAGATTTAGGTCATTACGAGCGTTTT CTTAACGTTCCTACTTCTCAGGCCAATAACGTTACTACAGGAAGAGTGTATCTTTCGGTTATTGAAAAAGAAAGAAGAGG AGAGTTTTTAGGAAAAACAGTTCAGGTTGTTCCTCACATCACAAACGAAATCAAAGACAGAATGCAGTTGCTGGGTAAAT CTGGCGATTATGATATTGTAATTACTGAAATTGGTGGAACTGTAGGTGATATTGAATCATTACCTTATATAGAATCTGTT CGTCAGTTAGTTTGGGAATTAGGAGAAAATAATGGAATTGTTATTCATTTAACTTTAGTTCCTTATTTGGCTGCAGCTGG TGAGTTGAAAACAAAGCCAACACAGCACTCTGTAAAAACTTTAATGGAAAGCGGAATTAAAGCTGATATTTTGGTTTGTA GAACTGAGCACGAATTATCTCAGGAATTACGTCAAAAACTAGCTTTGTTTTGTAATGTTAAAAAAGAAGCAGTTATCCAG TCTATTGATGCTTCTACTATATATGAAGTTCCAAATTTAATGCTTGAAGAAGGATTAGATGTTGTAGCTTTAAAGAAATT AGATCTGCCTAAAAAAGCATCTCCGGATCTTAAAAACTGGAATACTTTCTTAAAAAGATTAAAAAGTCCAAAACAAACTG TAAATATTGGTTTGGTTGGAAAATATGTAGAAATGCAGGATTGTTACAAATCTATTTTAGAGGCGTTCATTCATGCAGGT GCTGCAAATGAAACTAAAGTAAATGTAATTTCAATTCACTCAGAGCATATTAATGCTGATAACGTAGAAGAGAAATTAGG AACTCTTGACGGAGTTTTAGTTGCTCCAGGATTTGGAGAAAGAGGTATTGAAGGAAAAATCGAAGCAGTTCGTTATGTTC GTGAAAACAATATTCCGTTTTTCGGAATTTGTTTAGGAATGCAGATGTCTGTTATCGAGTATTCTAGAAATATTTTAGGT TATGCCGATGCCAATTCAACAGAGATGAACGAGAAAACGCCTCATCCGGTTGTGAATTTAATGGAAGAGCAAAAAAATAT TACAGATAAAGGCGGAACAATGCGTTTAGGAGCTTGGAAATGTGATATTAAACCAAATACACTGGCACACAGAATTTACG GTGAAAAAACAATTTCAGAACGTCACCGCCACCGTTATGAGTACAATAATAAATATGCTGATGAATTACAGAAAGCAGGT TTAAAAGCATCTGGAGTAAACCCGGATACCGGATTAGTTGAAATCGTAGAGCTTGAAAACCACCCGTTTTTTATTGGTGT ACAATACCACCCAGAATACAAAAGTACAGTTGCAAATCCGCACCCAATATTTGTAAACTTTGTGGCAGCTGCTGTAAATG CGCATAAAAAATAA
Upstream 100 bases:
>100_bases AAAAATTTGCAAATTATCTCATTATCGAATTGATAAATTGTCTAATTAAATTTGTACTTTTGCCAAGTTTTTTACACAAC TACTTACAAACAACAACAGA
Downstream 100 bases:
>100_bases TAATTAATATTCTGAGAAGAATGTAACTTTTGAGATCAACTCATTACTAATAAGCTTCAACGAATAACTTTTTTAAATTA ATAATGGAAGAAAAAAAATT
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MNQTKYIFVTGGVTSSLGKGIIAASLAKLLQGRGYRTTIQKFDPYINVDPGTLNPYEHGECYVTDDGAETDLDLGHYERF LNVPTSQANNVTTGRVYLSVIEKERRGEFLGKTVQVVPHITNEIKDRMQLLGKSGDYDIVITEIGGTVGDIESLPYIESV RQLVWELGENNGIVIHLTLVPYLAAAGELKTKPTQHSVKTLMESGIKADILVCRTEHELSQELRQKLALFCNVKKEAVIQ SIDASTIYEVPNLMLEEGLDVVALKKLDLPKKASPDLKNWNTFLKRLKSPKQTVNIGLVGKYVEMQDCYKSILEAFIHAG AANETKVNVISIHSEHINADNVEEKLGTLDGVLVAPGFGERGIEGKIEAVRYVRENNIPFFGICLGMQMSVIEYSRNILG YADANSTEMNEKTPHPVVNLMEEQKNITDKGGTMRLGAWKCDIKPNTLAHRIYGEKTISERHRHRYEYNNKYADELQKAG LKASGVNPDTGLVEIVELENHPFFIGVQYHPEYKSTVANPHPIFVNFVAAAVNAHKK
Sequences:
>Translated_537_residues MNQTKYIFVTGGVTSSLGKGIIAASLAKLLQGRGYRTTIQKFDPYINVDPGTLNPYEHGECYVTDDGAETDLDLGHYERF LNVPTSQANNVTTGRVYLSVIEKERRGEFLGKTVQVVPHITNEIKDRMQLLGKSGDYDIVITEIGGTVGDIESLPYIESV RQLVWELGENNGIVIHLTLVPYLAAAGELKTKPTQHSVKTLMESGIKADILVCRTEHELSQELRQKLALFCNVKKEAVIQ SIDASTIYEVPNLMLEEGLDVVALKKLDLPKKASPDLKNWNTFLKRLKSPKQTVNIGLVGKYVEMQDCYKSILEAFIHAG AANETKVNVISIHSEHINADNVEEKLGTLDGVLVAPGFGERGIEGKIEAVRYVRENNIPFFGICLGMQMSVIEYSRNILG YADANSTEMNEKTPHPVVNLMEEQKNITDKGGTMRLGAWKCDIKPNTLAHRIYGEKTISERHRHRYEYNNKYADELQKAG LKASGVNPDTGLVEIVELENHPFFIGVQYHPEYKSTVANPHPIFVNFVAAAVNAHKK >Mature_537_residues MNQTKYIFVTGGVTSSLGKGIIAASLAKLLQGRGYRTTIQKFDPYINVDPGTLNPYEHGECYVTDDGAETDLDLGHYERF LNVPTSQANNVTTGRVYLSVIEKERRGEFLGKTVQVVPHITNEIKDRMQLLGKSGDYDIVITEIGGTVGDIESLPYIESV RQLVWELGENNGIVIHLTLVPYLAAAGELKTKPTQHSVKTLMESGIKADILVCRTEHELSQELRQKLALFCNVKKEAVIQ SIDASTIYEVPNLMLEEGLDVVALKKLDLPKKASPDLKNWNTFLKRLKSPKQTVNIGLVGKYVEMQDCYKSILEAFIHAG AANETKVNVISIHSEHINADNVEEKLGTLDGVLVAPGFGERGIEGKIEAVRYVRENNIPFFGICLGMQMSVIEYSRNILG YADANSTEMNEKTPHPVVNLMEEQKNITDKGGTMRLGAWKCDIKPNTLAHRIYGEKTISERHRHRYEYNNKYADELQKAG LKASGVNPDTGLVEIVELENHPFFIGVQYHPEYKSTVANPHPIFVNFVAAAVNAHKK
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=548, Percent_Identity=45.0729927007299, Blast_Score=472, Evalue=1e-133, Organism=Homo sapiens, GI28559085, Length=547, Percent_Identity=42.7787934186472, Blast_Score=456, Evalue=1e-128, Organism=Homo sapiens, GI28559083, Length=547, Percent_Identity=42.7787934186472, Blast_Score=456, Evalue=1e-128, Organism=Homo sapiens, GI221316689, Length=547, Percent_Identity=42.7787934186472, Blast_Score=456, Evalue=1e-128, Organism=Escherichia coli, GI1789142, Length=544, Percent_Identity=50.9191176470588, Blast_Score=549, Evalue=1e-157, Organism=Caenorhabditis elegans, GI25148299, Length=602, Percent_Identity=36.8770764119601, Blast_Score=403, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6322563, Length=559, Percent_Identity=40.7871198568873, Blast_Score=435, Evalue=1e-123, Organism=Saccharomyces cerevisiae, GI6319432, Length=561, Percent_Identity=40.6417112299465, Blast_Score=423, Evalue=1e-119, Organism=Drosophila melanogaster, GI24664469, Length=549, Percent_Identity=43.5336976320583, Blast_Score=452, Evalue=1e-127, Organism=Drosophila melanogaster, GI21357815, Length=494, Percent_Identity=41.7004048582996, Blast_Score=384, Evalue=1e-107,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_FLAJ1 (A5FHA4)
Other databases:
- EMBL: CP000685 - RefSeq: YP_001194729.1 - ProteinModelPortal: A5FHA4 - SMR: A5FHA4 - STRING: A5FHA4 - GeneID: 5092115 - GenomeReviews: CP000685_GR - KEGG: fjo:Fjoh_2383 - eggNOG: COG0504 - HOGENOM: HBG597806 - OMA: TEWLRGN - ProtClustDB: PRK05380 - BioCyc: FJOH376686:FJOH_2383-MONOMER - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 59809; Mature: 59809
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS51273 GATASE_TYPE_1
Important sites: ACT_SITE 384-384 ACT_SITE 510-510 ACT_SITE 512-512
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQTKYIFVTGGVTSSLGKGIIAASLAKLLQGRGYRTTIQKFDPYINVDPGTLNPYEHGE CCCCEEEEEECCCHHHHCCHHHHHHHHHHHHCCCCEEHHHHCCCEEECCCCCCCCCCCCE CYVTDDGAETDLDLGHYERFLNVPTSQANNVTTGRVYLSVIEKERRGEFLGKTVQVVPHI EEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHH TNEIKDRMQLLGKSGDYDIVITEIGGTVGDIESLPYIESVRQLVWELGENNGIVIHLTLV HHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHCCCCCEEEEEEHH PYLAAAGELKTKPTQHSVKTLMESGIKADILVCRTEHELSQELRQKLALFCNVKKEAVIQ HHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHH SIDASTIYEVPNLMLEEGLDVVALKKLDLPKKASPDLKNWNTFLKRLKSPKQTVNIGLVG HCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEE KYVEMQDCYKSILEAFIHAGAANETKVNVISIHSEHINADNVEEKLGTLDGVLVAPGFGE CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCCEEECCCCCC RGIEGKIEAVRYVRENNIPFFGICLGMQMSVIEYSRNILGYADANSTEMNEKTPHPVVNL CCCCCHHHHHHHHHHCCCCEEEEEHHCHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHH MEEQKNITDKGGTMRLGAWKCDIKPNTLAHRIYGEKTISERHRHRYEYNNKYADELQKAG HHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCC LKASGVNPDTGLVEIVELENHPFFIGVQYHPEYKSTVANPHPIFVNFVAAAVNAHKK CCCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNQTKYIFVTGGVTSSLGKGIIAASLAKLLQGRGYRTTIQKFDPYINVDPGTLNPYEHGE CCCCEEEEEECCCHHHHCCHHHHHHHHHHHHCCCCEEHHHHCCCEEECCCCCCCCCCCCE CYVTDDGAETDLDLGHYERFLNVPTSQANNVTTGRVYLSVIEKERRGEFLGKTVQVVPHI EEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHH TNEIKDRMQLLGKSGDYDIVITEIGGTVGDIESLPYIESVRQLVWELGENNGIVIHLTLV HHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHCCCCCEEEEEEHH PYLAAAGELKTKPTQHSVKTLMESGIKADILVCRTEHELSQELRQKLALFCNVKKEAVIQ HHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHH SIDASTIYEVPNLMLEEGLDVVALKKLDLPKKASPDLKNWNTFLKRLKSPKQTVNIGLVG HCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEE KYVEMQDCYKSILEAFIHAGAANETKVNVISIHSEHINADNVEEKLGTLDGVLVAPGFGE CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHCCCCCEEECCCCCC RGIEGKIEAVRYVRENNIPFFGICLGMQMSVIEYSRNILGYADANSTEMNEKTPHPVVNL CCCCCHHHHHHHHHHCCCCEEEEEHHCHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHH MEEQKNITDKGGTMRLGAWKCDIKPNTLAHRIYGEKTISERHRHRYEYNNKYADELQKAG HHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCC LKASGVNPDTGLVEIVELENHPFFIGVQYHPEYKSTVANPHPIFVNFVAAAVNAHKK CCCCCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA