Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is ypeB [H]

Identifier: 146300137

GI number: 146300137

Start: 2854893

End: 2855129

Strand: Direct

Name: ypeB [H]

Synonym: Fjoh_2382

Alternate gene names: 146300137

Gene position: 2854893-2855129 (Clockwise)

Preceding gene: 146300136

Following gene: 146300138

Centisome position: 46.83

GC content: 29.96

Gene sequence:

>237_bases
ATGGAACAAGACAAAAAACTTCTCATAAAATTAGCACATACTAAAATGCCTTTCGGGAAATACGAAGGACGTTTTTTAAT
TGATTTACCAGAATACTATGTGGTTTGGTATCATAATAAAGGTTTTCCAAAAGGAGAATTAGGCCAGCAGTTACAGCTTA
TTTATGAGTTAAAACTTAATGGTTTAGAAGAATTGATACGAAATATTAAGAAACAATATCCTAAACCTGTAAAATAG

Upstream 100 bases:

>100_bases
GTAGCAAAAGAAGAAAAATAATAATAGCTTTGTAAGCAATCAAAAGCAAGAAGGAGGAATAGTATATATTCTTTCTTCTT
GCTTCTTTTTTCTTAAAAAA

Downstream 100 bases:

>100_bases
TAAGAAAAATCTTTGGTTGTTTGATTTTTTTTATATAAGTTTGAAATACAAAAATATTATAATTTCTAAAAACAAAGTGA
TACCACAGAATTCAAGACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MEQDKKLLIKLAHTKMPFGKYEGRFLIDLPEYYVVWYHNKGFPKGELGQQLQLIYELKLNGLEELIRNIKKQYPKPVK

Sequences:

>Translated_78_residues
MEQDKKLLIKLAHTKMPFGKYEGRFLIDLPEYYVVWYHNKGFPKGELGQQLQLIYELKLNGLEELIRNIKKQYPKPVK
>Mature_78_residues
MEQDKKLLIKLAHTKMPFGKYEGRFLIDLPEYYVVWYHNKGFPKGELGQQLQLIYELKLNGLEELIRNIKKQYPKPVK

Specific function: Unknown

COG id: COG3530

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082098, Length=69, Percent_Identity=47.8260869565217, Blast_Score=69, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9350; Mature: 9350

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQDKKLLIKLAHTKMPFGKYEGRFLIDLPEYYVVWYHNKGFPKGELGQQLQLIYELKLN
CCCCHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC
GLEELIRNIKKQYPKPVK
CHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEQDKKLLIKLAHTKMPFGKYEGRFLIDLPEYYVVWYHNKGFPKGELGQQLQLIYELKLN
CCCCHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC
GLEELIRNIKKQYPKPVK
CHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]