Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300065

Identifier: 146300065

GI number: 146300065

Start: 2779505

End: 2780836

Strand: Direct

Name: 146300065

Synonym: Fjoh_2310

Alternate gene names: NA

Gene position: 2779505-2780836 (Clockwise)

Preceding gene: 146300064

Following gene: 146300076

Centisome position: 45.59

GC content: 37.39

Gene sequence:

>1332_bases
ATGAAGAGAACTTTACTTTTATGCACCCTTTTTGGGAGCTTTTTTTACTGTCAGGGTCAGTCTTACTTTGGGTTTCGGGA
CGACAATTATGCCGGAATTCAGGGCGTTTTGTTTAATCCGTCGTCAATTGTAGATTCTAAGTACAGATCCGATGTTACAG
TTTTTTCGGCAAGCGGTACGCTTCAAAATGATTTATACGGCGTAAATATCATGGACGCTTTAGACGGCAATTATAATTTG
GCAGAAGATGCCAGCAAAAACTTTAAATCAAACAACAGAGGAAATTTTAATGTCGATATTTTAGGTCCTTCGTTTATGCT
GAATATTACGCCGGAGCATAGTATTGGGCTTTATTCGCGCGTGCGAAGCATAACCAATCTTGTTGGGGTAAACGGAGAAC
TTATTGATGAGGTAAATAAAGAAACAGATGTTTCAAGCAGTTTTTTATTTTCGGGCGGAAATCCAAATGGTGTAACCAAT
TCTTGGGCCGAAATTGGAGCGAGCTACGGAACGGTATTATTAGACCGCGACGATCATTTTATTAAAGGCGGTATTACGGT
AAAGTATGTAATGGCGGGAGTAAACGGTTATATTAACGGAAGTGATTTAAGCGTGGCTTTTACCAAAAACAGTGCTGATC
CTGCTTTTAGTCAGTACACTTCGACTGGAACGCTGAAAACGGCTGCAAGTTATGATTATGAAAACGGAAAAGATCCTAAG
TTTGATATGACATCGGCTGGTGTGGGTGTTGATTTAGGATTTACTTATGAATATCGTACCAATTGTCATACTTGTATGGG
AAACCGATATAAATTTAAAGTTGCAGCATCGGTAACCGATATTGGAAAAATCAATTATAAAGATCTTACTGAAAACACTT
ATAACTTAACCGGAAGCGTAAGTCAGGCTGATATAGATGATGCCGATGATATTTTCGAATTCTTTGATGCTAATTACACT
AAAATTTCATCAAGAAAAGGAGTGAAAGCTAATTTACCAACGGCTCTCCATACCAATTTTGACTGGAACATTGACCAAAA
GTTTTACTTGAATCTAAGCACTGATTTTAGTTTGGTTGATGCTAAAAAAGTCAACGGAACTGCCATTGCTAATTCGGTTA
CTTTTACGCCCAGATATGAAACAAGACAATTTAGTTTTTATATTCCGGTAACGTATATGGAATACAGCGGTACTCAGGTA
GGAACAGGCTTTAGAGCTGGTCCGTTGTTTATTGGTTCAGGATCACTTGTTTCGAATTTGTTTTCAAACAAATCAAAAGC
TTCTAATATTTATGTAGGTTTAAAACTTCCTATTTATCAGGATTACAGATAG

Upstream 100 bases:

>100_bases
CTCACAAAAAATAAGTTTTTTATTGGCTTTTTTTACCTCATATTTGTGTGTCTTAATCAGGAAAAGACAAATATGCTAAT
CAACCAATTCAAACTATTTT

Downstream 100 bases:

>100_bases
GTTTTTTTTAAAGGTACTGAGGTTCTAAGGTTCTGAGGGACTAAGTTTTTTTTAAAAGGTGCTGAGGAACTAAGGTTCTG
AGGGTCTAAGTTTTTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MKRTLLLCTLFGSFFYCQGQSYFGFRDDNYAGIQGVLFNPSSIVDSKYRSDVTVFSASGTLQNDLYGVNIMDALDGNYNL
AEDASKNFKSNNRGNFNVDILGPSFMLNITPEHSIGLYSRVRSITNLVGVNGELIDEVNKETDVSSSFLFSGGNPNGVTN
SWAEIGASYGTVLLDRDDHFIKGGITVKYVMAGVNGYINGSDLSVAFTKNSADPAFSQYTSTGTLKTAASYDYENGKDPK
FDMTSAGVGVDLGFTYEYRTNCHTCMGNRYKFKVAASVTDIGKINYKDLTENTYNLTGSVSQADIDDADDIFEFFDANYT
KISSRKGVKANLPTALHTNFDWNIDQKFYLNLSTDFSLVDAKKVNGTAIANSVTFTPRYETRQFSFYIPVTYMEYSGTQV
GTGFRAGPLFIGSGSLVSNLFSNKSKASNIYVGLKLPIYQDYR

Sequences:

>Translated_443_residues
MKRTLLLCTLFGSFFYCQGQSYFGFRDDNYAGIQGVLFNPSSIVDSKYRSDVTVFSASGTLQNDLYGVNIMDALDGNYNL
AEDASKNFKSNNRGNFNVDILGPSFMLNITPEHSIGLYSRVRSITNLVGVNGELIDEVNKETDVSSSFLFSGGNPNGVTN
SWAEIGASYGTVLLDRDDHFIKGGITVKYVMAGVNGYINGSDLSVAFTKNSADPAFSQYTSTGTLKTAASYDYENGKDPK
FDMTSAGVGVDLGFTYEYRTNCHTCMGNRYKFKVAASVTDIGKINYKDLTENTYNLTGSVSQADIDDADDIFEFFDANYT
KISSRKGVKANLPTALHTNFDWNIDQKFYLNLSTDFSLVDAKKVNGTAIANSVTFTPRYETRQFSFYIPVTYMEYSGTQV
GTGFRAGPLFIGSGSLVSNLFSNKSKASNIYVGLKLPIYQDYR
>Mature_443_residues
MKRTLLLCTLFGSFFYCQGQSYFGFRDDNYAGIQGVLFNPSSIVDSKYRSDVTVFSASGTLQNDLYGVNIMDALDGNYNL
AEDASKNFKSNNRGNFNVDILGPSFMLNITPEHSIGLYSRVRSITNLVGVNGELIDEVNKETDVSSSFLFSGGNPNGVTN
SWAEIGASYGTVLLDRDDHFIKGGITVKYVMAGVNGYINGSDLSVAFTKNSADPAFSQYTSTGTLKTAASYDYENGKDPK
FDMTSAGVGVDLGFTYEYRTNCHTCMGNRYKFKVAASVTDIGKINYKDLTENTYNLTGSVSQADIDDADDIFEFFDANYT
KISSRKGVKANLPTALHTNFDWNIDQKFYLNLSTDFSLVDAKKVNGTAIANSVTFTPRYETRQFSFYIPVTYMEYSGTQV
GTGFRAGPLFIGSGSLVSNLFSNKSKASNIYVGLKLPIYQDYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48783; Mature: 48783

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLLLCTLFGSFFYCQGQSYFGFRDDNYAGIQGVLFNPSSIVDSKYRSDVTVFSASGT
CCCEEEEEEHHCCEEEECCCCEECCCCCCCCCEEEEEECCHHHHHHHHCCCEEEEEECCC
LQNDLYGVNIMDALDGNYNLAEDASKNFKSNNRGNFNVDILGPSFMLNITPEHSIGLYSR
CCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCCHHHHH
VRSITNLVGVNGELIDEVNKETDVSSSFLFSGGNPNGVTNSWAEIGASYGTVLLDRDDHF
HHHHHHHHCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCEEEEECCCCE
IKGGITVKYVMAGVNGYINGSDLSVAFTKNSADPAFSQYTSTGTLKTAASYDYENGKDPK
EECCCEEEEEEECCCCEECCCCEEEEEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCCC
FDMTSAGVGVDLGFTYEYRTNCHTCMGNRYKFKVAASVTDIGKINYKDLTENTYNLTGSV
EEECCCCCCEEEEEEEEECCCCHHHCCCCEEEEEEEEEECCCCCCCHHCCCCEEEEECCC
SQADIDDADDIFEFFDANYTKISSRKGVKANLPTALHTNFDWNIDQKFYLNLSTDFSLVD
CCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEE
AKKVNGTAIANSVTFTPRYETRQFSFYIPVTYMEYSGTQVGTGFRAGPLFIGSGSLVSNL
EECCCCEEEECEEEECCCCCCEEEEEEEEEEEEEECCCEECCCCCCCCEEEECCHHHHHH
FSNKSKASNIYVGLKLPIYQDYR
HCCCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MKRTLLLCTLFGSFFYCQGQSYFGFRDDNYAGIQGVLFNPSSIVDSKYRSDVTVFSASGT
CCCEEEEEEHHCCEEEECCCCEECCCCCCCCCEEEEEECCHHHHHHHHCCCEEEEEECCC
LQNDLYGVNIMDALDGNYNLAEDASKNFKSNNRGNFNVDILGPSFMLNITPEHSIGLYSR
CCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCCHHHHH
VRSITNLVGVNGELIDEVNKETDVSSSFLFSGGNPNGVTNSWAEIGASYGTVLLDRDDHF
HHHHHHHHCCCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCEEEEECCCCE
IKGGITVKYVMAGVNGYINGSDLSVAFTKNSADPAFSQYTSTGTLKTAASYDYENGKDPK
EECCCEEEEEEECCCCEECCCCEEEEEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCCC
FDMTSAGVGVDLGFTYEYRTNCHTCMGNRYKFKVAASVTDIGKINYKDLTENTYNLTGSV
EEECCCCCCEEEEEEEEECCCCHHHCCCCEEEEEEEEEECCCCCCCHHCCCCEEEEECCC
SQADIDDADDIFEFFDANYTKISSRKGVKANLPTALHTNFDWNIDQKFYLNLSTDFSLVD
CCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEE
AKKVNGTAIANSVTFTPRYETRQFSFYIPVTYMEYSGTQVGTGFRAGPLFIGSGSLVSNL
EECCCCEEEECEEEECCCCCCEEEEEEEEEEEEEECCCEECCCCCCCCEEEECCHHHHHH
FSNKSKASNIYVGLKLPIYQDYR
HCCCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA