| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300045
Identifier: 146300045
GI number: 146300045
Start: 2765758
End: 2767212
Strand: Reverse
Name: 146300045
Synonym: Fjoh_2290
Alternate gene names: NA
Gene position: 2767212-2765758 (Counterclockwise)
Preceding gene: 146300046
Following gene: 146300044
Centisome position: 45.39
GC content: 36.08
Gene sequence:
>1455_bases ATGAAAACTACAAAAATGGTATGCCTTTTTATCATAATAATCGCATTAAGCGCTTGTAAAAAGGACGCAAAGGGAAAAAA TGATAATTATACAACAGTAAACAAAAGCGCAGCTTCTTCTGAGTGTTTAGCTCCTGCTAATTGGTTTACGATGGTAAACA ATACCCGCCAGACTCCTCCGCCAAATGAAGGACCAACAAGCGTATTTGCCAACAATGCTACGGTAACGAATTGTGACTTT CATCAGTGGTCATGGCAAAAATTTCTATGGCTGACTAATGAAGTTAATGGAAAACCTTTATTTATGACCAATCTAATTCA GGTGAACGCAGCAGGCCAGAAATTAGACCCAAGCAACGGAATTGTTTTAACAGATACTGCTCAGGCAAGTTCTAATACTG ATATTTTACAAACTCCTAAATACCAATCAGGTGTTCCTAAACAAACTACAGTCTATTATTCTATATTTATGGACAAGCTT CTTTACGACACTATGATAAAATATGGCCCAATTGCCAAAAATGATCCTACAAAAGTAAAAGACATCACTTTTCCTGTAGG AGCATTAGAACTAAAAACTTCATGGATTGATGCGAGTGCTCTTAAAGATACTTCTACTTATTTTGTTACTCAGGGCGTAA TAAACGGAGTAAAAACAAAAGTAGCACTTTTAGGAATGCATGTCGTGGGAATTGTAGAAAATCATCCCGAATTTGTATGG GCAACTTTTGAACATGAAAACCTTGCGCCTGCTTATGACTGGACTAAAGCTACGCCAACAGCTGATGCTCCAGTAACAAG TACAGTTGATTATCCGTTTTTTAATAAAAACAGCACAGCAACGGTTCAGAATATAACTACAGGAAATGGAAATTACACTG ATGTCTTTTCTGTCTACAAATATGGCGTTCCTGTAGAAAAAGCAATGAAAGGTTCTTTTAATGTGCAGCTTTATATGGAT ACAAGCCAAAATGGTTCTGAAAACTTCAATAACATTCGTACTATTAACCAAAGCGTTAAAACACAGCTGAAAGGTATTTG GAACAATTATTTCTACAATGGTTCATTATGGATAAATACTGCAGGATACAACAGCACTCCGGCACAAGCGGCTTTATTAG ATTCGTTGAGCTATAATCTTTCAAATTCTTCACCGGGAGATCTAACCAGAGGTTCTACTGCAGCTTACAATATTACTATG GAAACCTATGTTCAGGTAGGATTTGGTCCATCATCTATACATGGAAATACTGTAGACAATCTTGTTAATTGTTTCTCCTG CCACAATGCATCTAACAATTCTGCTGAATCGCCTCTTTTTATAAGCCATGTTTTTACAGGATATGTACAAAATCTACAGG GTTTGAACAGAAAACAAATCAAAGATGCACATGTTAAAGAAATCGTCAAACAATTCAATATACGTCTAAAATTAAAGCAG GCAAAAGCAAAATAA
Upstream 100 bases:
>100_bases TGGCGGACTTGTGACATTTTTTCAAAAGTCACTTTCTTAATTATCTACTTTCAGGTATTCAAAAAAAGATAATTAAATAA ACCAACTAAAGCCCCATGTT
Downstream 100 bases:
>100_bases CAACCGCTTTACTTTTAAATATATAAACATAAAAACCACAAGCTCTTGTTTGTGGTTTTTATGTTTTATTGCCCCTTTGT AACTAAGAACCTTTGTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MKTTKMVCLFIIIIALSACKKDAKGKNDNYTTVNKSAASSECLAPANWFTMVNNTRQTPPPNEGPTSVFANNATVTNCDF HQWSWQKFLWLTNEVNGKPLFMTNLIQVNAAGQKLDPSNGIVLTDTAQASSNTDILQTPKYQSGVPKQTTVYYSIFMDKL LYDTMIKYGPIAKNDPTKVKDITFPVGALELKTSWIDASALKDTSTYFVTQGVINGVKTKVALLGMHVVGIVENHPEFVW ATFEHENLAPAYDWTKATPTADAPVTSTVDYPFFNKNSTATVQNITTGNGNYTDVFSVYKYGVPVEKAMKGSFNVQLYMD TSQNGSENFNNIRTINQSVKTQLKGIWNNYFYNGSLWINTAGYNSTPAQAALLDSLSYNLSNSSPGDLTRGSTAAYNITM ETYVQVGFGPSSIHGNTVDNLVNCFSCHNASNNSAESPLFISHVFTGYVQNLQGLNRKQIKDAHVKEIVKQFNIRLKLKQ AKAK
Sequences:
>Translated_484_residues MKTTKMVCLFIIIIALSACKKDAKGKNDNYTTVNKSAASSECLAPANWFTMVNNTRQTPPPNEGPTSVFANNATVTNCDF HQWSWQKFLWLTNEVNGKPLFMTNLIQVNAAGQKLDPSNGIVLTDTAQASSNTDILQTPKYQSGVPKQTTVYYSIFMDKL LYDTMIKYGPIAKNDPTKVKDITFPVGALELKTSWIDASALKDTSTYFVTQGVINGVKTKVALLGMHVVGIVENHPEFVW ATFEHENLAPAYDWTKATPTADAPVTSTVDYPFFNKNSTATVQNITTGNGNYTDVFSVYKYGVPVEKAMKGSFNVQLYMD TSQNGSENFNNIRTINQSVKTQLKGIWNNYFYNGSLWINTAGYNSTPAQAALLDSLSYNLSNSSPGDLTRGSTAAYNITM ETYVQVGFGPSSIHGNTVDNLVNCFSCHNASNNSAESPLFISHVFTGYVQNLQGLNRKQIKDAHVKEIVKQFNIRLKLKQ AKAK >Mature_484_residues MKTTKMVCLFIIIIALSACKKDAKGKNDNYTTVNKSAASSECLAPANWFTMVNNTRQTPPPNEGPTSVFANNATVTNCDF HQWSWQKFLWLTNEVNGKPLFMTNLIQVNAAGQKLDPSNGIVLTDTAQASSNTDILQTPKYQSGVPKQTTVYYSIFMDKL LYDTMIKYGPIAKNDPTKVKDITFPVGALELKTSWIDASALKDTSTYFVTQGVINGVKTKVALLGMHVVGIVENHPEFVW ATFEHENLAPAYDWTKATPTADAPVTSTVDYPFFNKNSTATVQNITTGNGNYTDVFSVYKYGVPVEKAMKGSFNVQLYMD TSQNGSENFNNIRTINQSVKTQLKGIWNNYFYNGSLWINTAGYNSTPAQAALLDSLSYNLSNSSPGDLTRGSTAAYNITM ETYVQVGFGPSSIHGNTVDNLVNCFSCHNASNNSAESPLFISHVFTGYVQNLQGLNRKQIKDAHVKEIVKQFNIRLKLKQ AKAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53423; Mature: 53423
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTKMVCLFIIIIALSACKKDAKGKNDNYTTVNKSAASSECLAPANWFTMVNNTRQTPP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHEEEECCCCCCCC PNEGPTSVFANNATVTNCDFHQWSWQKFLWLTNEVNGKPLFMTNLIQVNAAGQKLDPSNG CCCCCCCEEECCCEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCC IVLTDTAQASSNTDILQTPKYQSGVPKQTTVYYSIFMDKLLYDTMIKYGPIAKNDPTKVK EEEEECCCCCCCCCEEECCCCCCCCCCHHEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEE DITFPVGALELKTSWIDASALKDTSTYFVTQGVINGVKTKVALLGMHVVGIVENHPEFVW EEEECCCEEEEEECCCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHEEEEEEECCCCEEE ATFEHENLAPAYDWTKATPTADAPVTSTVDYPFFNKNSTATVQNITTGNGNYTDVFSVYK EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHH YGVPVEKAMKGSFNVQLYMDTSQNGSENFNNIRTINQSVKTQLKGIWNNYFYNGSLWINT CCCCHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCEEEEEE AGYNSTPAQAALLDSLSYNLSNSSPGDLTRGSTAAYNITMETYVQVGFGPSSIHGNTVDN CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCHHH LVNCFSCHNASNNSAESPLFISHVFTGYVQNLQGLNRKQIKDAHVKEIVKQFNIRLKLKQ HHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEC AKAK CCCC >Mature Secondary Structure MKTTKMVCLFIIIIALSACKKDAKGKNDNYTTVNKSAASSECLAPANWFTMVNNTRQTPP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHEEEECCCCCCCC PNEGPTSVFANNATVTNCDFHQWSWQKFLWLTNEVNGKPLFMTNLIQVNAAGQKLDPSNG CCCCCCCEEECCCEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCC IVLTDTAQASSNTDILQTPKYQSGVPKQTTVYYSIFMDKLLYDTMIKYGPIAKNDPTKVK EEEEECCCCCCCCCEEECCCCCCCCCCHHEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEE DITFPVGALELKTSWIDASALKDTSTYFVTQGVINGVKTKVALLGMHVVGIVENHPEFVW EEEECCCEEEEEECCCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHEEEEEEECCCCEEE ATFEHENLAPAYDWTKATPTADAPVTSTVDYPFFNKNSTATVQNITTGNGNYTDVFSVYK EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHH YGVPVEKAMKGSFNVQLYMDTSQNGSENFNNIRTINQSVKTQLKGIWNNYFYNGSLWINT CCCCHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCEEEEEE AGYNSTPAQAALLDSLSYNLSNSSPGDLTRGSTAAYNITMETYVQVGFGPSSIHGNTVDN CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCHHH LVNCFSCHNASNNSAESPLFISHVFTGYVQNLQGLNRKQIKDAHVKEIVKQFNIRLKLKQ HHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEC AKAK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA