| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300038
Identifier: 146300038
GI number: 146300038
Start: 2756174
End: 2757322
Strand: Reverse
Name: 146300038
Synonym: Fjoh_2283
Alternate gene names: NA
Gene position: 2757322-2756174 (Counterclockwise)
Preceding gene: 146300039
Following gene: 146300037
Centisome position: 45.23
GC content: 33.33
Gene sequence:
>1149_bases ATGACTTTTAAAAAATTAATTCTAAAAATCCATTTATGGCTGGGATTATCTTCCGGTTTAATTGTAGTTATATTGGGTAT TACAGGATGCCTATATTGCTTTGAAGAAGAATTACGTCCTATTGTTCATGATTATTATTACGTAGATCAAATAAAGGACA AAAAATTACCTTTAAGCCAATTAATTGAAATTGCAAAAAATGCAAATTCTGATTATCCTAAACAATCTTTTTCAGGATGC AGGACGTTTAGCGATGATGATCGTACTGTAGTTATCTGGTTTTATAAAGAATTAGACAAAGATGCGTTTTGGTACTGGAA TCAATATCATAATACTTATCTCTATCTGGATCCTTTTACCGGAAATGTAAAAAAACAAGAAGATTATAATTTCGAGTTTT TTGTTTTTGTTCGAATGCTGCATCAAACATTATGTCTCAACAGCGATATTGGAGATCCAATTGTAGGAACGGCAACTATT GTATTTATTATTTCGCTTATTACCGGTCTTATACTTTGGTGGCCCAAAAACAAGCAGGCGGCTAAACAACGTTTTTCGTT TAAATGGAAAAACAGTACTAAATGGAAACGCAAGAACTACGATTTACATAATATTCTCGGATTCTATTCGATGCTTTTTG CTTTACTAATCGCCTTGACAGGATTAGTCTGGGCATTTCAGTCTTATGATAAAGGGGTACAATGGCTGCTTAATGGTGGG AAAACATTTGAAAACGAGAGATTCGTTTCTGATACTACTCAATACACTAAAAAAATGCCCACTGATAAGATTTACGCTTC CATTAGACAATCGCAGCCTAAAGCAAAAAGTTTTTATTTGTTTGTACCTGAAGAAAAAGATTCGCTGGCAACATTTAGCA CATTTATAAGATACAATAATCGTTTTGATGATATCTCCATTGAATTTGATCGTTATACAGCCAAACCTTTAAAAATTGAG ACTTATCACGAGAAGAATAATGGTGAGAAGTTTCGGTTTATTAATTACGATTTGCATGTTGGAAGTATCCTTGGATTTCC GGGAAAAGTACTCGCCTTTTTTGCCAGCCTGATTTGTGCAAGTTTACCAGTTACCGGTTTTTTAATCTGGTGGGGAAGAA ATAACAAAAAAACTAACAAAACGAAGTAA
Upstream 100 bases:
>100_bases CATTAAAATTCTAAAGTCATTTTTTTTCTTAAAACAACACCTCTGTAATACAACGGAGGTGTTTCTTTTTGTTAAACATT TTATTTATAAATCTTAGTAA
Downstream 100 bases:
>100_bases TTATAAGGGTTCACAGTATTGTTAAAAAAATTATAATTTCTACATTTGCGGTGTTTTTACCAATCTTACACATCCCCCGT AATCCACTTAAAAAGAAAAA
Product: PepSY-associated TM helix domain-containing protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix Domain-Containing Protein; Flavodoxin/Nitric Oxide Synthase; PepSY-Associated TM Helix; Sulfite Reductase Flavoprotein Component; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Family; Iron-Uptake Factor; Iron-Regulated Transmembrane Protein; Peptidase; Sulfite Reductase; Sulfite Reductase Flavoprotein Alpha-Component; Transmembrane Protein; PepSY-Associated Membrane Protein; Bifunctional Protein Flavoprotein Alpha-Component; Transporter-Like Membrane Protein; Bifunctional Sulfite Reductase; Iron Uptake Protein; NB-Dependent Receptor Plug; Protein Containing PepSY-Associated TM Helix; Integral Membrane Protein; Oxidoreductase; PepSY Amd Peptidase M4 Protein; Sulfite Reductase Alpha Subunit; Amino Acid Carrier Family Protein; Sulfite Reductase/Membrane Protein; Iron Uptake Factor; Cytoplasmic Membrane Protein
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MTFKKLILKIHLWLGLSSGLIVVILGITGCLYCFEEELRPIVHDYYYVDQIKDKKLPLSQLIEIAKNANSDYPKQSFSGC RTFSDDDRTVVIWFYKELDKDAFWYWNQYHNTYLYLDPFTGNVKKQEDYNFEFFVFVRMLHQTLCLNSDIGDPIVGTATI VFIISLITGLILWWPKNKQAAKQRFSFKWKNSTKWKRKNYDLHNILGFYSMLFALLIALTGLVWAFQSYDKGVQWLLNGG KTFENERFVSDTTQYTKKMPTDKIYASIRQSQPKAKSFYLFVPEEKDSLATFSTFIRYNNRFDDISIEFDRYTAKPLKIE TYHEKNNGEKFRFINYDLHVGSILGFPGKVLAFFASLICASLPVTGFLIWWGRNNKKTNKTK
Sequences:
>Translated_382_residues MTFKKLILKIHLWLGLSSGLIVVILGITGCLYCFEEELRPIVHDYYYVDQIKDKKLPLSQLIEIAKNANSDYPKQSFSGC RTFSDDDRTVVIWFYKELDKDAFWYWNQYHNTYLYLDPFTGNVKKQEDYNFEFFVFVRMLHQTLCLNSDIGDPIVGTATI VFIISLITGLILWWPKNKQAAKQRFSFKWKNSTKWKRKNYDLHNILGFYSMLFALLIALTGLVWAFQSYDKGVQWLLNGG KTFENERFVSDTTQYTKKMPTDKIYASIRQSQPKAKSFYLFVPEEKDSLATFSTFIRYNNRFDDISIEFDRYTAKPLKIE TYHEKNNGEKFRFINYDLHVGSILGFPGKVLAFFASLICASLPVTGFLIWWGRNNKKTNKTK >Mature_381_residues TFKKLILKIHLWLGLSSGLIVVILGITGCLYCFEEELRPIVHDYYYVDQIKDKKLPLSQLIEIAKNANSDYPKQSFSGCR TFSDDDRTVVIWFYKELDKDAFWYWNQYHNTYLYLDPFTGNVKKQEDYNFEFFVFVRMLHQTLCLNSDIGDPIVGTATIV FIISLITGLILWWPKNKQAAKQRFSFKWKNSTKWKRKNYDLHNILGFYSMLFALLIALTGLVWAFQSYDKGVQWLLNGGK TFENERFVSDTTQYTKKMPTDKIYASIRQSQPKAKSFYLFVPEEKDSLATFSTFIRYNNRFDDISIEFDRYTAKPLKIET YHEKNNGEKFRFINYDLHVGSILGFPGKVLAFFASLICASLPVTGFLIWWGRNNKKTNKTK
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44898; Mature: 44767
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKKLILKIHLWLGLSSGLIVVILGITGCLYCFEEELRPIVHDYYYVDQIKDKKLPLSQ CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LIEIAKNANSDYPKQSFSGCRTFSDDDRTVVIWFYKELDKDAFWYWNQYHNTYLYLDPFT HHHHHHCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEHHCCCCEEEECCCCCEEEEEECCC GNVKKQEDYNFEFFVFVRMLHQTLCLNSDIGDPIVGTATIVFIISLITGLILWWPKNKQA CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHH AKQRFSFKWKNSTKWKRKNYDLHNILGFYSMLFALLIALTGLVWAFQSYDKGVQWLLNGG HHHHCCEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KTFENERFVSDTTQYTKKMPTDKIYASIRQSQPKAKSFYLFVPEEKDSLATFSTFIRYNN CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCC RFDDISIEFDRYTAKPLKIETYHEKNNGEKFRFINYDLHVGSILGFPGKVLAFFASLICA CCCCEEEEECCEECCCEEEEEEECCCCCCEEEEEEEEEEECHHCCCCHHHHHHHHHHHHH SLPVTGFLIWWGRNNKKTNKTK HCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure TFKKLILKIHLWLGLSSGLIVVILGITGCLYCFEEELRPIVHDYYYVDQIKDKKLPLSQ CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LIEIAKNANSDYPKQSFSGCRTFSDDDRTVVIWFYKELDKDAFWYWNQYHNTYLYLDPFT HHHHHHCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEHHCCCCEEEECCCCCEEEEEECCC GNVKKQEDYNFEFFVFVRMLHQTLCLNSDIGDPIVGTATIVFIISLITGLILWWPKNKQA CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHH AKQRFSFKWKNSTKWKRKNYDLHNILGFYSMLFALLIALTGLVWAFQSYDKGVQWLLNGG HHHHCCEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KTFENERFVSDTTQYTKKMPTDKIYASIRQSQPKAKSFYLFVPEEKDSLATFSTFIRYNN CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCC RFDDISIEFDRYTAKPLKIETYHEKNNGEKFRFINYDLHVGSILGFPGKVLAFFASLICA CCCCEEEEECCEECCCEEEEEEECCCCCCEEEEEEEEEEECHHCCCCHHHHHHHHHHHHH SLPVTGFLIWWGRNNKKTNKTK HCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA