| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299833
Identifier: 146299833
GI number: 146299833
Start: 2455097
End: 2455762
Strand: Direct
Name: 146299833
Synonym: Fjoh_2075
Alternate gene names: NA
Gene position: 2455097-2455762 (Clockwise)
Preceding gene: 146299807
Following gene: 146299834
Centisome position: 40.27
GC content: 32.58
Gene sequence:
>666_bases ATGCGTGAATATCTTGATTATAAAGGAATTACTAAATATAAGTTCTGTAATGATTTAGGTTTTTCTAATAAATTTTTAGA CAATAGCAGTAATATGGGAACAGATAAGGCGTGTAAAATTTTACACTATTATCCGGAAATTAATTCTGAGTGGCTTTTAA CCGGAAACGGACCTATGATAAAAGAAGATAATACCAATATTGTAATTATGAATAACGACCGAAGAACGATCGATACACTG CATGTGAGCCAGGAAATACCATTATATGATCTAGAAGCTGTGGCGGGTTTACGAGAATTATTCAACAGCGGAAAACCACA AAGAGTTTTGGATACAATAAAAATTCCCAATCTGCCAAAATGTGATGGAGCTATTTCTGTAACTGGAGACAGTATGTATC CGCTTTTAAAATCAGGAGATATCGTCCTCTATAAAGAAACTGAGTTTGAAAATATCTTTTTTGGTGAAATGTATCTTTTA AGCGTAAAACTAAATGACTGGGAAGAATACATTACTGTAAAATACGTTCAAAAATCAGATCTAGGATCAGAATTTGTAAA ATTGGTAAGCCAGAATTCACATCATCAGCCAAAAGATATTCATATCTCAAAAATTTCGGCATTGGCACTTATAAAAGCTA GTATCCGTATCAATACCATGATGTAA
Upstream 100 bases:
>100_bases TAATTATTTTTCTTTACTTTGCAAATATAATGTAAAATAATACATTAAAACAAATTTTTAACGTAAAAAAATACGTCTTT TTATGGGGTCAACTGAAAGA
Downstream 100 bases:
>100_bases TTTATTTGAAAATCAGATTTTTCTGTTTTTTAGAAATAAAAATAGAAGCCTTTAATTTTTACATTTAAAGGCTTCTATTC TTTTTTTAAATTATGTCCAA
Product: putative phage repressor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MREYLDYKGITKYKFCNDLGFSNKFLDNSSNMGTDKACKILHYYPEINSEWLLTGNGPMIKEDNTNIVIMNNDRRTIDTL HVSQEIPLYDLEAVAGLRELFNSGKPQRVLDTIKIPNLPKCDGAISVTGDSMYPLLKSGDIVLYKETEFENIFFGEMYLL SVKLNDWEEYITVKYVQKSDLGSEFVKLVSQNSHHQPKDIHISKISALALIKASIRINTMM
Sequences:
>Translated_221_residues MREYLDYKGITKYKFCNDLGFSNKFLDNSSNMGTDKACKILHYYPEINSEWLLTGNGPMIKEDNTNIVIMNNDRRTIDTL HVSQEIPLYDLEAVAGLRELFNSGKPQRVLDTIKIPNLPKCDGAISVTGDSMYPLLKSGDIVLYKETEFENIFFGEMYLL SVKLNDWEEYITVKYVQKSDLGSEFVKLVSQNSHHQPKDIHISKISALALIKASIRINTMM >Mature_221_residues MREYLDYKGITKYKFCNDLGFSNKFLDNSSNMGTDKACKILHYYPEINSEWLLTGNGPMIKEDNTNIVIMNNDRRTIDTL HVSQEIPLYDLEAVAGLRELFNSGKPQRVLDTIKIPNLPKCDGAISVTGDSMYPLLKSGDIVLYKETEFENIFFGEMYLL SVKLNDWEEYITVKYVQKSDLGSEFVKLVSQNSHHQPKDIHISKISALALIKASIRINTMM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25288; Mature: 25288
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREYLDYKGITKYKFCNDLGFSNKFLDNSSNMGTDKACKILHYYPEINSEWLLTGNGPMI CCCCCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCEEEECCCCEE KEDNTNIVIMNNDRRTIDTLHVSQEIPLYDLEAVAGLRELFNSGKPQRVLDTIKIPNLPK EECCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC CDGAISVTGDSMYPLLKSGDIVLYKETEFENIFFGEMYLLSVKLNDWEEYITVKYVQKSD CCCEEEECCCCCCHHCCCCCEEEEECCCCCEEEECEEEEEEEEECCCCCEEEEEEEECCC LGSEFVKLVSQNSHHQPKDIHISKISALALIKASIRINTMM CHHHHHHHHHCCCCCCCCCEEHHHHHEEEEEEEEEEEEECC >Mature Secondary Structure MREYLDYKGITKYKFCNDLGFSNKFLDNSSNMGTDKACKILHYYPEINSEWLLTGNGPMI CCCCCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCEEEECCCCEE KEDNTNIVIMNNDRRTIDTLHVSQEIPLYDLEAVAGLRELFNSGKPQRVLDTIKIPNLPK EECCCEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC CDGAISVTGDSMYPLLKSGDIVLYKETEFENIFFGEMYLLSVKLNDWEEYITVKYVQKSD CCCEEEECCCCCCHHCCCCCEEEEECCCCCEEEECEEEEEEEEECCCCCEEEEEEEECCC LGSEFVKLVSQNSHHQPKDIHISKISALALIKASIRINTMM CHHHHHHHHHCCCCCCCCCEEHHHHHEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA