Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146299807

Identifier: 146299807

GI number: 146299807

Start: 2414415

End: 2414825

Strand: Direct

Name: 146299807

Synonym: Fjoh_2048

Alternate gene names: NA

Gene position: 2414415-2414825 (Clockwise)

Preceding gene: 146299806

Following gene: 146299833

Centisome position: 39.6

GC content: 32.6

Gene sequence:

>411_bases
ATGAGCACATTAACAAAACAAAACCACATAGGGCGAAAAATAAGCCGTATTCGTGAATTAAGAGATATGAAGCAGGAAGC
ATTGGCTCAGGCTCTCGGAACAAATCAACAAGCTGTTTCTATTATAGAGAATAGTGAAACTATCGATGAAGAAAAGTTGG
TTGAAGTAGCAAAAGCTTTGGGTGTAACTGTCGAAGCAATTAAAAATTTTTCAGACGAAGCTGCGATTAATTATTTTAAT
AGTTTTACTGATACAAAGAATAGCCAAGTAAATTTCGGAAACCATTGTACTTTTAATCCACTTGATAAATTGGTAGAAGC
TTTTGAGGAAAACAAAAAACTCTATGAGCGTTTGTTAGAATCTGAGAAAGAGAAAAAATCTTATTTAGAGAAATTGTTGA
AGGATAAATAA

Upstream 100 bases:

>100_bases
GAAATAGAGCATTTAAATTATTCTAATTTGTATCTTACAAGAGATAAGATGTTTTTTACAGATTGCTTTATTTTGTATTG
CTAATTATTACCTTTGAATT

Downstream 100 bases:

>100_bases
CTTTTTATACAATAAAAAATGGTTTGAGCTTCTTAAGTTCAAACCATTTTTTTATTTCAACAAAACAATATTAAGTATTG
AAAGTTAATCCTTTCGCTTT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Xin-Antitoxin System Antitoxin Component Xre Family; Transcriptional Regulator; HTH_3 Family Transcriptional Regulator Protein; Helix-Turn-Helix Domain Protein; XRE Family Plasmid Maintenance System Antidote Protein; Helix-TurN-Helix Domain Protein

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSTLTKQNHIGRKISRIRELRDMKQEALAQALGTNQQAVSIIENSETIDEEKLVEVAKALGVTVEAIKNFSDEAAINYFN
SFTDTKNSQVNFGNHCTFNPLDKLVEAFEENKKLYERLLESEKEKKSYLEKLLKDK

Sequences:

>Translated_136_residues
MSTLTKQNHIGRKISRIRELRDMKQEALAQALGTNQQAVSIIENSETIDEEKLVEVAKALGVTVEAIKNFSDEAAINYFN
SFTDTKNSQVNFGNHCTFNPLDKLVEAFEENKKLYERLLESEKEKKSYLEKLLKDK
>Mature_135_residues
STLTKQNHIGRKISRIRELRDMKQEALAQALGTNQQAVSIIENSETIDEEKLVEVAKALGVTVEAIKNFSDEAAINYFNS
FTDTKNSQVNFGNHCTFNPLDKLVEAFEENKKLYERLLESEKEKKSYLEKLLKDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15584; Mature: 15453

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLTKQNHIGRKISRIRELRDMKQEALAQALGTNQQAVSIIENSETIDEEKLVEVAKAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH
GVTVEAIKNFSDEAAINYFNSFTDTKNSQVNFGNHCTFNPLDKLVEAFEENKKLYERLLE
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SEKEKKSYLEKLLKDK
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STLTKQNHIGRKISRIRELRDMKQEALAQALGTNQQAVSIIENSETIDEEKLVEVAKAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHH
GVTVEAIKNFSDEAAINYFNSFTDTKNSQVNFGNHCTFNPLDKLVEAFEENKKLYERLLE
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SEKEKKSYLEKLLKDK
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA