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The map label for this gene is xylB [H]

Identifier: 146299760

GI number: 146299760

Start: 2335010

End: 2336491

Strand: Direct

Name: xylB [H]

Synonym: Fjoh_2000

Alternate gene names: 146299760

Gene position: 2335010-2336491 (Clockwise)

Preceding gene: 146299759

Following gene: 146299761

Centisome position: 38.3

GC content: 38.93

Gene sequence:

>1482_bases
ATGTATTATATCGGATATGATATTGGAAGTTCTTCTGTCAAGGCAGCCTTGGTAGAAGCAGAAACGGGTAAAAAAATAAT
CGTTTTGAATGAACCACAGAACGAAATGGAAATCCTTTCGATTCACCCGGATTGGGCAGAACAGGATCCTGAAATCTGGT
GGCAGCACATTTGTACAGCGACTAAAAGAGCGATTAAAGAAGCTAATATTGATGCCTCTAAAATTCAGGGAATTGGTATT
TCGTACCAAATGCACGGATTGGTGATTGTCGATAAAGACGGAAACGCACTTCGAAATTCAATTATTTGGTGTGACAGCCG
TGCGGTGGAAATTGGAAACAAAGCTTTCGCCGAAATTGGAGAAGAAAAATGCATGTCGCATTTATTGAATTCGCCAGGGA
ATTTTACAGCTTCAAAACTGAAATGGGTTAAAGAAAACGAACCTGAAGTTTACAATAAAATCTCTAAATATATGCTTCCG
GGAGATTACATCGCTTTGAAATTAACGGGCGAAGTAACGACTACCAAAAATGGTTTGTCTGAAGGAATGCTTTGGGATTA
TAAAGAAAATAAAGTAGCCGACTGGCTTTTGGAATACTACGGAATCGACAAATCATTGACGCCAAAAATCGTAGAAAATT
TTACGAATCAGGGAGTTGTTACTGAAAAAGCTTCGGCAGAATCTGGTCTTCCAGCTGGAATTCCGATTGTGTACAGAGCG
GGAGATCAGCCAAACAATGCATTGTCATTAAATGTTTTAAATCCGGGAGAAGTGGCTGCGACTGGCGGAACTTCGGGCGT
ATTTTATGCGGTAAGTGAAATGTCGTCTGGAAAAAGCACAAGAGTAAACAATTTCGTTCACGTAAACTACGAACTGGAAA
CGCCAAGAGTGGGTAAACTTTTAAATATTAACGGAGCAGGAATTCAGTACAGATGGCTTCGTAATAATATGGGCAACGAA
AGTTATGAGGTTATGAACGAAAAAGCTTCAAATGTTGAAGTTGGATCAGAAGGAGTTGTCGTGATTCCTTTTGGAAATGG
CGCTGAGCGTATGTTCAACAATAAAACTATTGGAACACATTTCTTAAACCTCAACTTAAATATTCACAACAGCGCACATT
TGTTTAGAGCTTCTCTTGAAGGAATTGCTTTTTCATTTGTATACGGAATGGAATGTTTAAAAGACGACAATGCGACGATT
AATGTGATTAGAGCAGGAAATGATAACCTTTTCCGTTCGGAGATTTTCTCGAATACCGTGGCGACTTTAATTGGCCACGA
AATCGAAATTTACAATACAACAGGAGCGGTTGGTGCGGCGAGAGCAGTTGGTTTAAAAGATGGTGATTACAGCAAGTTTG
GTGCTAATGTGAGTGACAACGACCATGTAATGACGTTTTTACCGCTGCACAACAAAGAACCTTACGAAACGGCTTATAAA
AAATGGAAACAAGAATTAGAATTAATATTAACAAATAAATAA

Upstream 100 bases:

>100_bases
TTAAAGAATTAGGAACCAAAGCAGCGGCATTTATTACGCATGACGAAGAAACGCAGTGTTATGTGCCGACAAATTTAATA
ATAAGAGAATCATTGTAAGT

Downstream 100 bases:

>100_bases
AAAAATCAAATGATAGTTTTAGGAGATAAAGAATACTACAAAGGTATCGGCCAAATTAAATTTGAAGGAAAAGAATCTGA
TAATCCGCTGGCATTTAAAT

Product: carbohydrate kinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MYYIGYDIGSSSVKAALVEAETGKKIIVLNEPQNEMEILSIHPDWAEQDPEIWWQHICTATKRAIKEANIDASKIQGIGI
SYQMHGLVIVDKDGNALRNSIIWCDSRAVEIGNKAFAEIGEEKCMSHLLNSPGNFTASKLKWVKENEPEVYNKISKYMLP
GDYIALKLTGEVTTTKNGLSEGMLWDYKENKVADWLLEYYGIDKSLTPKIVENFTNQGVVTEKASAESGLPAGIPIVYRA
GDQPNNALSLNVLNPGEVAATGGTSGVFYAVSEMSSGKSTRVNNFVHVNYELETPRVGKLLNINGAGIQYRWLRNNMGNE
SYEVMNEKASNVEVGSEGVVVIPFGNGAERMFNNKTIGTHFLNLNLNIHNSAHLFRASLEGIAFSFVYGMECLKDDNATI
NVIRAGNDNLFRSEIFSNTVATLIGHEIEIYNTTGAVGAARAVGLKDGDYSKFGANVSDNDHVMTFLPLHNKEPYETAYK
KWKQELELILTNK

Sequences:

>Translated_493_residues
MYYIGYDIGSSSVKAALVEAETGKKIIVLNEPQNEMEILSIHPDWAEQDPEIWWQHICTATKRAIKEANIDASKIQGIGI
SYQMHGLVIVDKDGNALRNSIIWCDSRAVEIGNKAFAEIGEEKCMSHLLNSPGNFTASKLKWVKENEPEVYNKISKYMLP
GDYIALKLTGEVTTTKNGLSEGMLWDYKENKVADWLLEYYGIDKSLTPKIVENFTNQGVVTEKASAESGLPAGIPIVYRA
GDQPNNALSLNVLNPGEVAATGGTSGVFYAVSEMSSGKSTRVNNFVHVNYELETPRVGKLLNINGAGIQYRWLRNNMGNE
SYEVMNEKASNVEVGSEGVVVIPFGNGAERMFNNKTIGTHFLNLNLNIHNSAHLFRASLEGIAFSFVYGMECLKDDNATI
NVIRAGNDNLFRSEIFSNTVATLIGHEIEIYNTTGAVGAARAVGLKDGDYSKFGANVSDNDHVMTFLPLHNKEPYETAYK
KWKQELELILTNK
>Mature_493_residues
MYYIGYDIGSSSVKAALVEAETGKKIIVLNEPQNEMEILSIHPDWAEQDPEIWWQHICTATKRAIKEANIDASKIQGIGI
SYQMHGLVIVDKDGNALRNSIIWCDSRAVEIGNKAFAEIGEEKCMSHLLNSPGNFTASKLKWVKENEPEVYNKISKYMLP
GDYIALKLTGEVTTTKNGLSEGMLWDYKENKVADWLLEYYGIDKSLTPKIVENFTNQGVVTEKASAESGLPAGIPIVYRA
GDQPNNALSLNVLNPGEVAATGGTSGVFYAVSEMSSGKSTRVNNFVHVNYELETPRVGKLLNINGAGIQYRWLRNNMGNE
SYEVMNEKASNVEVGSEGVVVIPFGNGAERMFNNKTIGTHFLNLNLNIHNSAHLFRASLEGIAFSFVYGMECLKDDNATI
NVIRAGNDNLFRSEIFSNTVATLIGHEIEIYNTTGAVGAARAVGLKDGDYSKFGANVSDNDHVMTFLPLHNKEPYETAYK
KWKQELELILTNK

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI88196792, Length=517, Percent_Identity=24.9516441005803, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI42794763, Length=398, Percent_Identity=25.8793969849246, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI164663830, Length=205, Percent_Identity=31.219512195122, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI164663828, Length=205, Percent_Identity=31.219512195122, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI41393575, Length=409, Percent_Identity=24.9388753056235, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI4504007, Length=398, Percent_Identity=25.6281407035176, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI189409120, Length=398, Percent_Identity=25.6281407035176, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI1789987, Length=445, Percent_Identity=28.9887640449438, Blast_Score=175, Evalue=6e-45,
Organism=Escherichia coli, GI1790005, Length=499, Percent_Identity=26.8537074148297, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1787789, Length=515, Percent_Identity=23.1067961165049, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1789168, Length=399, Percent_Identity=22.3057644110276, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790361, Length=478, Percent_Identity=25.9414225941423, Blast_Score=78, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17535599, Length=447, Percent_Identity=22.8187919463087, Blast_Score=88, Evalue=8e-18,
Organism=Drosophila melanogaster, GI24655555, Length=481, Percent_Identity=24.5322245322245, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24655560, Length=481, Percent_Identity=24.5322245322245, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24655570, Length=481, Percent_Identity=24.5322245322245, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24655574, Length=481, Percent_Identity=24.5322245322245, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24655565, Length=481, Percent_Identity=24.5322245322245, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI17864214, Length=515, Percent_Identity=23.6893203883495, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24654573, Length=439, Percent_Identity=24.1457858769932, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 54514; Mature: 54514

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYIGYDIGSSSVKAALVEAETGKKIIVLNEPQNEMEILSIHPDWAEQDPEIWWQHICTA
CEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHH
TKRAIKEANIDASKIQGIGISYQMHGLVIVDKDGNALRNSIIWCDSRAVEIGNKAFAEIG
HHHHHHHCCCCHHHEEECCEEEEEEEEEEEECCCCHHHCCEEEECCCEEECCCHHHHHHH
EEKCMSHLLNSPGNFTASKLKWVKENEPEVYNKISKYMLPGDYIALKLTGEVTTTKNGLS
HHHHHHHHHCCCCCCCHHHEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCEEECCCCCC
EGMLWDYKENKVADWLLEYYGIDKSLTPKIVENFTNQGVVTEKASAESGLPAGIPIVYRA
CCCEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEC
GDQPNNALSLNVLNPGEVAATGGTSGVFYAVSEMSSGKSTRVNNFVHVNYELETPRVGKL
CCCCCCEEEEEEECCCCEEECCCCCCEEEEEECCCCCCCCEECCEEEEEEEECCCCCCEE
LNINGAGIQYRWLRNNMGNESYEVMNEKASNVEVGSEGVVVIPFGNGAERMFNNKTIGTH
EEECCCCEEEEEECCCCCCCHHHHHHCCCCCCEECCCCEEEEECCCCHHHHHCCCEEEEE
FLNLNLNIHNSAHLFRASLEGIAFSFVYGMECLKDDNATINVIRAGNDNLFRSEIFSNTV
EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
ATLIGHEIEIYNTTGAVGAARAVGLKDGDYSKFGANVSDNDHVMTFLPLHNKEPYETAYK
HHHHCCEEEEEECCCCCCHHEEECCCCCCCHHCCCCCCCCCEEEEEEECCCCCHHHHHHH
KWKQELELILTNK
HHHHHHHEEEECC
>Mature Secondary Structure
MYYIGYDIGSSSVKAALVEAETGKKIIVLNEPQNEMEILSIHPDWAEQDPEIWWQHICTA
CEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHH
TKRAIKEANIDASKIQGIGISYQMHGLVIVDKDGNALRNSIIWCDSRAVEIGNKAFAEIG
HHHHHHHCCCCHHHEEECCEEEEEEEEEEEECCCCHHHCCEEEECCCEEECCCHHHHHHH
EEKCMSHLLNSPGNFTASKLKWVKENEPEVYNKISKYMLPGDYIALKLTGEVTTTKNGLS
HHHHHHHHHCCCCCCCHHHEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCEEECCCCCC
EGMLWDYKENKVADWLLEYYGIDKSLTPKIVENFTNQGVVTEKASAESGLPAGIPIVYRA
CCCEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEC
GDQPNNALSLNVLNPGEVAATGGTSGVFYAVSEMSSGKSTRVNNFVHVNYELETPRVGKL
CCCCCCEEEEEEECCCCEEECCCCCCEEEEEECCCCCCCCEECCEEEEEEEECCCCCCEE
LNINGAGIQYRWLRNNMGNESYEVMNEKASNVEVGSEGVVVIPFGNGAERMFNNKTIGTH
EEECCCCEEEEEECCCCCCCHHHHHHCCCCCCEECCCCEEEEECCCCHHHHHCCCEEEEE
FLNLNLNIHNSAHLFRASLEGIAFSFVYGMECLKDDNATINVIRAGNDNLFRSEIFSNTV
EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
ATLIGHEIEIYNTTGAVGAARAVGLKDGDYSKFGANVSDNDHVMTFLPLHNKEPYETAYK
HHHHCCEEEEEECCCCCCHHEEECCCCCCCHHCCCCCCCCCEEEEEEECCCCCHHHHHHH
KWKQELELILTNK
HHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]