| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is aguA [H]
Identifier: 146299753
GI number: 146299753
Start: 2325400
End: 2327553
Strand: Direct
Name: aguA [H]
Synonym: Fjoh_1993
Alternate gene names: 146299753
Gene position: 2325400-2327553 (Clockwise)
Preceding gene: 146299752
Following gene: 146299754
Centisome position: 38.14
GC content: 36.12
Gene sequence:
>2154_bases ATGGCTTCAATAAGACTTGTATTCCTGTTTGTTTCGATTTCCTTTTCGGCTTTAGCGCAAAAGGATTATAAACTTTGGCT TCAGTATGATAAAATCAGCAATTCGGCAATTGCTTCAGAATATAAAAACAATATTCAGGGAATTGTTTCTTTGGGAAATT CTGAAACTTCTCAGATTTCCGTAAAAGAATTAGAAACAGGAATCGCTGGAATGCTGGGAAATAAACCCCAAATTAAATCA GAAATTAAAGGAGAAAACAATCTGATTATTGGTTCTCAAAAAGCTTTAAATCCCGATTTGCAAAAAGCTCTGCAGACAGA TTTTGAAAAAATAAACAACGAAGGATTTATTATTAAATCCATCTCTTTTAAAAATAAAAAACAGCTTATCATTTCAGGAA AAAATGATGTTGCGGTTTTGTACGGAGTCTTTGATTTTTTAAGGTTGCTGCAGACCAATAAATCAATTAAAAATTTAAAT ATTGCCGATTCACCAAAAACAAATCTTCGAATTTTAAATCACTGGGATAATCTCGATCGAACTGTTGAACGCGGCTACGC AGGTTTCTCTTTATGGAACTGGCAGAAATTACCTGATTTTATCGATCAAAGATATATTGATTATGCCAGAGCGAATGCTT CAATTGGAATTAATGGAACGGTTTTAACCAATGTAAATGCAAACGCTTTAATCCTGACTCCGCAATATTTAGAAAAAGTT GAAGCTTTAGCTAATGTTTTCAGATCTTACGGAATAAAAGTTTATTTAACGGCAAGATTTTCGGCACCAATCGAAATAGG AAACTTAAAAACTGCCGATCCAAAAGATCCGGAAGTAATTAATTGGTGGAAAAATAAATCGGCTGAAATTTATAAAAGAA TTCCAGATTTTGGTGGGTTTTTGGTGAAAGCCAATTCAGAAGGTCAGCCCGGCCCGCAAAACTACGGAAGAGATCATGTT GACGGAGCTAATATGCTGGCTGATGCCGTTGCGCCTTTTGGCGGAGTTATTATGTGGAGAGCCTTTGTATATTCAGAACA TGATGCAAATGATCGTGCTAAACAAGCTTATACTGAATTTCAGCCTTATGATGGAAAATTCAAAGAAAATGTAATTGTTC AGGTTAAAAACGGAGCAATCGATTTTCAGCCTAGAGAACCTTTTCATCCGTTATTTGGAGCAATGCCGAAAACGCCTTTA ATGATGGAGTTTCAAATTACACAGGAATATCTGGGTTTTAGCACACATTTGGTTTTTCTGCCTAAATTATTTCAGGAAGT TTTAGAATCTGATACCTTTCAAAAAGGAAAAGGGGCAACCGTTGCTAAAGTTATTGACGGTACTTTATATCAAAACAAAT TAACCGGAATTGCAGGCGTTGCCAATATAGGAAACGACTTAAACTGGACAGGACATCCTTTTTTACAGGCAAATTGGTAT GGCTTCGGCAGGCTGGCCTGGGATCCATATTTAGATTCAGAAACCATTGCCGATGAATGGTTAAGAAGTACCTTTTCTAA CGATGAAAATTTTATTAAACCTGTAAAAAATATCATGATGGAATCGCGTGAAGCCGTTGTCAATTACATGACACCGCTTG GATTACATCATATTATGGATACAGGACATCATTACGGGCCTGGGCCTTGGGTTTCTAATTTGTCAAGACCAGAATGGAAT CCAACCTATTATCATAAAGCAGACAAAAACGGAATTGGTTTCGACCGATCAAAATCGGGTACGAATGCCGTTTCACAATA CGCAGCAGAAGCCGCAAATCTTTTTGATAATTTAGAAAATTGTCCCGAAAAAGATCTTTTATGGTTTCATCATGTTGCAT GGGATTATAAACTGAAAAACGGACAAACACTTTGGAACGGCTTGGCATTGAAATACCAAGAAGGTGTAAATCAGGTTGCA GTAATGCAGAATGTTTGGAATCAGACAGAAAAGTATGTTGACAGCGAACGTTTTAACGAAGTAAAAATGTTATTAGAAAT TCAGCATAAAGAAGCAAAATGGTGGCGTGATGCCTGCTTATTATATTTTCAGCAATTTTCAGGAAAAGAACTTCCGGCTG GAGTCGAAAAACCAACACAAACTTTAGAGTATTTTAAATCATTAAAATTTCCTTTTGCACCAGGAAATGGCTAA
Upstream 100 bases:
>100_bases CATAATGTATTTTTTAAATTAAAATTTTATCAAATAGTATTATTAAGATGTAAAATGTTGATACAGTAAAAATGAAATTT AAGAATAAACTAATTAGTAA
Downstream 100 bases:
>100_bases AATTAGAACACGGATGACACGGATTCACGATAGCGAACCTGCGTCATCCGCGTACCAAATACCAAAAATATATTTTTAAA ATTATGAGCAAAAAAACGGC
Product: alpha-glucuronidase
Products: NA
Alternate protein names: Alpha-glucosiduronase [H]
Number of amino acids: Translated: 717; Mature: 716
Protein sequence:
>717_residues MASIRLVFLFVSISFSALAQKDYKLWLQYDKISNSAIASEYKNNIQGIVSLGNSETSQISVKELETGIAGMLGNKPQIKS EIKGENNLIIGSQKALNPDLQKALQTDFEKINNEGFIIKSISFKNKKQLIISGKNDVAVLYGVFDFLRLLQTNKSIKNLN IADSPKTNLRILNHWDNLDRTVERGYAGFSLWNWQKLPDFIDQRYIDYARANASIGINGTVLTNVNANALILTPQYLEKV EALANVFRSYGIKVYLTARFSAPIEIGNLKTADPKDPEVINWWKNKSAEIYKRIPDFGGFLVKANSEGQPGPQNYGRDHV DGANMLADAVAPFGGVIMWRAFVYSEHDANDRAKQAYTEFQPYDGKFKENVIVQVKNGAIDFQPREPFHPLFGAMPKTPL MMEFQITQEYLGFSTHLVFLPKLFQEVLESDTFQKGKGATVAKVIDGTLYQNKLTGIAGVANIGNDLNWTGHPFLQANWY GFGRLAWDPYLDSETIADEWLRSTFSNDENFIKPVKNIMMESREAVVNYMTPLGLHHIMDTGHHYGPGPWVSNLSRPEWN PTYYHKADKNGIGFDRSKSGTNAVSQYAAEAANLFDNLENCPEKDLLWFHHVAWDYKLKNGQTLWNGLALKYQEGVNQVA VMQNVWNQTEKYVDSERFNEVKMLLEIQHKEAKWWRDACLLYFQQFSGKELPAGVEKPTQTLEYFKSLKFPFAPGNG
Sequences:
>Translated_717_residues MASIRLVFLFVSISFSALAQKDYKLWLQYDKISNSAIASEYKNNIQGIVSLGNSETSQISVKELETGIAGMLGNKPQIKS EIKGENNLIIGSQKALNPDLQKALQTDFEKINNEGFIIKSISFKNKKQLIISGKNDVAVLYGVFDFLRLLQTNKSIKNLN IADSPKTNLRILNHWDNLDRTVERGYAGFSLWNWQKLPDFIDQRYIDYARANASIGINGTVLTNVNANALILTPQYLEKV EALANVFRSYGIKVYLTARFSAPIEIGNLKTADPKDPEVINWWKNKSAEIYKRIPDFGGFLVKANSEGQPGPQNYGRDHV DGANMLADAVAPFGGVIMWRAFVYSEHDANDRAKQAYTEFQPYDGKFKENVIVQVKNGAIDFQPREPFHPLFGAMPKTPL MMEFQITQEYLGFSTHLVFLPKLFQEVLESDTFQKGKGATVAKVIDGTLYQNKLTGIAGVANIGNDLNWTGHPFLQANWY GFGRLAWDPYLDSETIADEWLRSTFSNDENFIKPVKNIMMESREAVVNYMTPLGLHHIMDTGHHYGPGPWVSNLSRPEWN PTYYHKADKNGIGFDRSKSGTNAVSQYAAEAANLFDNLENCPEKDLLWFHHVAWDYKLKNGQTLWNGLALKYQEGVNQVA VMQNVWNQTEKYVDSERFNEVKMLLEIQHKEAKWWRDACLLYFQQFSGKELPAGVEKPTQTLEYFKSLKFPFAPGNG >Mature_716_residues ASIRLVFLFVSISFSALAQKDYKLWLQYDKISNSAIASEYKNNIQGIVSLGNSETSQISVKELETGIAGMLGNKPQIKSE IKGENNLIIGSQKALNPDLQKALQTDFEKINNEGFIIKSISFKNKKQLIISGKNDVAVLYGVFDFLRLLQTNKSIKNLNI ADSPKTNLRILNHWDNLDRTVERGYAGFSLWNWQKLPDFIDQRYIDYARANASIGINGTVLTNVNANALILTPQYLEKVE ALANVFRSYGIKVYLTARFSAPIEIGNLKTADPKDPEVINWWKNKSAEIYKRIPDFGGFLVKANSEGQPGPQNYGRDHVD GANMLADAVAPFGGVIMWRAFVYSEHDANDRAKQAYTEFQPYDGKFKENVIVQVKNGAIDFQPREPFHPLFGAMPKTPLM MEFQITQEYLGFSTHLVFLPKLFQEVLESDTFQKGKGATVAKVIDGTLYQNKLTGIAGVANIGNDLNWTGHPFLQANWYG FGRLAWDPYLDSETIADEWLRSTFSNDENFIKPVKNIMMESREAVVNYMTPLGLHHIMDTGHHYGPGPWVSNLSRPEWNP TYYHKADKNGIGFDRSKSGTNAVSQYAAEAANLFDNLENCPEKDLLWFHHVAWDYKLKNGQTLWNGLALKYQEGVNQVAV MQNVWNQTEKYVDSERFNEVKMLLEIQHKEAKWWRDACLLYFQQFSGKELPAGVEKPTQTLEYFKSLKFPFAPGNG
Specific function: Releases 4-O-methylglucuronic acid from substituted xylo-oligosaccharides [H]
COG id: COG3661
COG function: function code G; Alpha-glucuronidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 67 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011395 - InterPro: IPR005154 - InterPro: IPR011099 - InterPro: IPR011100 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF07477 Glyco_hydro_67C; PF07488 Glyco_hydro_67M; PF03648 Glyco_hydro_67N [H]
EC number: =3.2.1.139 [H]
Molecular weight: Translated: 81315; Mature: 81184
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASIRLVFLFVSISFSALAQKDYKLWLQYDKISNSAIASEYKNNIQGIVSLGNSETSQIS CCCCEEEEHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCEEE VKELETGIAGMLGNKPQIKSEIKGENNLIIGSQKALNPDLQKALQTDFEKINNEGFIIKS HHHHHHHHHHHCCCCCCHHHHCCCCCCEEECCCHHCCHHHHHHHHHHHHHHCCCCEEEEE ISFKNKKQLIISGKNDVAVLYGVFDFLRLLQTNKSIKNLNIADSPKTNLRILNHWDNLDR ECCCCCCEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHH TVERGYAGFSLWNWQKLPDFIDQRYIDYARANASIGINGTVLTNVNANALILTPQYLEKV HHHCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECHHHHHHH EALANVFRSYGIKVYLTARFSAPIEIGNLKTADPKDPEVINWWKNKSAEIYKRIPDFGGF HHHHHHHHHCCEEEEEEEEECCCEEECCCCCCCCCCCCCEEHHCCCCHHHHHHCCCCCCE LVKANSEGQPGPQNYGRDHVDGANMLADAVAPFGGVIMWRAFVYSEHDANDRAKQAYTEF EEEECCCCCCCCHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHC QPYDGKFKENVIVQVKNGAIDFQPREPFHPLFGAMPKTPLMMEFQITQEYLGFSTHLVFL CCCCCCCCCCEEEEEECCEEECCCCCCCCHHHCCCCCCCEEEEEEEHHHHHCCHHHHHHH PKLFQEVLESDTFQKGKGATVAKVIDGTLYQNKLTGIAGVANIGNDLNWTGHPFLQANWY HHHHHHHHHCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCE GFGRLAWDPYLDSETIADEWLRSTFSNDENFIKPVKNIMMESREAVVNYMTPLGLHHIMD ECCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGHHYGPGPWVSNLSRPEWNPTYYHKADKNGIGFDRSKSGTNAVSQYAAEAANLFDNLEN CCCCCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC CPEKDLLWFHHVAWDYKLKNGQTLWNGLALKYQEGVNQVAVMQNVWNQTEKYVDSERFNE CCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VKMLLEIQHKEAKWWRDACLLYFQQFSGKELPAGVEKPTQTLEYFKSLKFPFAPGNG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ASIRLVFLFVSISFSALAQKDYKLWLQYDKISNSAIASEYKNNIQGIVSLGNSETSQIS CCCEEEEHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCEEE VKELETGIAGMLGNKPQIKSEIKGENNLIIGSQKALNPDLQKALQTDFEKINNEGFIIKS HHHHHHHHHHHCCCCCCHHHHCCCCCCEEECCCHHCCHHHHHHHHHHHHHHCCCCEEEEE ISFKNKKQLIISGKNDVAVLYGVFDFLRLLQTNKSIKNLNIADSPKTNLRILNHWDNLDR ECCCCCCEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHH TVERGYAGFSLWNWQKLPDFIDQRYIDYARANASIGINGTVLTNVNANALILTPQYLEKV HHHCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECHHHHHHH EALANVFRSYGIKVYLTARFSAPIEIGNLKTADPKDPEVINWWKNKSAEIYKRIPDFGGF HHHHHHHHHCCEEEEEEEEECCCEEECCCCCCCCCCCCCEEHHCCCCHHHHHHCCCCCCE LVKANSEGQPGPQNYGRDHVDGANMLADAVAPFGGVIMWRAFVYSEHDANDRAKQAYTEF EEEECCCCCCCCHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHC QPYDGKFKENVIVQVKNGAIDFQPREPFHPLFGAMPKTPLMMEFQITQEYLGFSTHLVFL CCCCCCCCCCEEEEEECCEEECCCCCCCCHHHCCCCCCCEEEEEEEHHHHHCCHHHHHHH PKLFQEVLESDTFQKGKGATVAKVIDGTLYQNKLTGIAGVANIGNDLNWTGHPFLQANWY HHHHHHHHHCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCE GFGRLAWDPYLDSETIADEWLRSTFSNDENFIKPVKNIMMESREAVVNYMTPLGLHHIMD ECCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGHHYGPGPWVSNLSRPEWNPTYYHKADKNGIGFDRSKSGTNAVSQYAAEAANLFDNLEN CCCCCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC CPEKDLLWFHHVAWDYKLKNGQTLWNGLALKYQEGVNQVAVMQNVWNQTEKYVDSERFNE CCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VKMLLEIQHKEAKWWRDACLLYFQQFSGKELPAGVEKPTQTLEYFKSLKFPFAPGNG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9044261; 10360571 [H]