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The map label for this gene is ybcL [C]

Identifier: 146299752

GI number: 146299752

Start: 2324583

End: 2325125

Strand: Direct

Name: ybcL [C]

Synonym: Fjoh_1992

Alternate gene names: 146299752

Gene position: 2324583-2325125 (Clockwise)

Preceding gene: 146299751

Following gene: 146299753

Centisome position: 38.13

GC content: 38.31

Gene sequence:

>543_bases
ATGAAAAAGCTAAATTTAATTTTGGTGTTGTCTTTAATTTTTACAACAACAATTTTTGCCCAAAAAACATTTACCCTAAC
CAGTAAAGATTTAGGAGGAGAAACTACAAAAGTTCAGGAATTCAACGGATTTGGATGTTCAGGTGAAAATCAATCACCGC
AATTATCATGGAAAAACGCTCCAGAAGGAACTAAAAGTTTTGCTGTAACCATGTACGATCCGGATGCGCCGACAGGAAGC
GGATTCTGGCATTGGGTAGTAGTTGATATTCCGGCAAACGTAAACGAATTGGTTACAGGTGCTGGAACTAAAAACCTTGT
TCCAAAAGGCGCTGTTCAAAGTGTTACTGATTTCGGAATTAAAGGATTTGGAGGTCCTTGTCCGCCGGTTGGTCATGGAT
TTCATCAATACATCATTACCGTTTATGCCTTAAAAACGGATAAATTGGGAACAGATGAAAATACAAATCCGGCAGTAGTA
GGATTTAATCTTTGGAACCAGACTTTGGCAAAAGCCAGTATCATAGCCTATTACAAACGATAA

Upstream 100 bases:

>100_bases
CAGAAAAACTGGACTTTTAGCAACAGTTTTTGATCCTTTCCCTAAAGTTTCGCTGGCATAGCAGAATCTAAATTTGCTTT
AAATTTTAAAACCAAGTAAA

Downstream 100 bases:

>100_bases
TAATTTCAGGATTTAACTTTAAATCCAACCCAGTTAAAGCAGGATAGTTTTTATAATTATCCTGCTTTTATTTGTTATAG
AATTATTTTTTTGAAAAAAA

Product: PEBP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKKLNLILVLSLIFTTTIFAQKTFTLTSKDLGGETTKVQEFNGFGCSGENQSPQLSWKNAPEGTKSFAVTMYDPDAPTGS
GFWHWVVVDIPANVNELVTGAGTKNLVPKGAVQSVTDFGIKGFGGPCPPVGHGFHQYIITVYALKTDKLGTDENTNPAVV
GFNLWNQTLAKASIIAYYKR

Sequences:

>Translated_180_residues
MKKLNLILVLSLIFTTTIFAQKTFTLTSKDLGGETTKVQEFNGFGCSGENQSPQLSWKNAPEGTKSFAVTMYDPDAPTGS
GFWHWVVVDIPANVNELVTGAGTKNLVPKGAVQSVTDFGIKGFGGPCPPVGHGFHQYIITVYALKTDKLGTDENTNPAVV
GFNLWNQTLAKASIIAYYKR
>Mature_180_residues
MKKLNLILVLSLIFTTTIFAQKTFTLTSKDLGGETTKVQEFNGFGCSGENQSPQLSWKNAPEGTKSFAVTMYDPDAPTGS
GFWHWVVVDIPANVNELVTGAGTKNLVPKGAVQSVTDFGIKGFGGPCPPVGHGFHQYIITVYALKTDKLGTDENTNPAVV
GFNLWNQTLAKASIIAYYKR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=184, Percent_Identity=49.4565217391304, Blast_Score=162, Evalue=1e-41,
Organism=Escherichia coli, GI1786990, Length=157, Percent_Identity=48.4076433121019, Blast_Score=144, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 19463; Mature: 19463

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLNLILVLSLIFTTTIFAQKTFTLTSKDLGGETTKVQEFNGFGCSGENQSPQLSWKNA
CCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
PEGTKSFAVTMYDPDAPTGSGFWHWVVVDIPANVNELVTGAGTKNLVPKGAVQSVTDFGI
CCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHEECCCCCCCCCCCHHHHHHHCCC
KGFGGPCPPVGHGFHQYIITVYALKTDKLGTDENTNPAVVGFNLWNQTLAKASIIAYYKR
CCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHEEEEECC
>Mature Secondary Structure
MKKLNLILVLSLIFTTTIFAQKTFTLTSKDLGGETTKVQEFNGFGCSGENQSPQLSWKNA
CCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
PEGTKSFAVTMYDPDAPTGSGFWHWVVVDIPANVNELVTGAGTKNLVPKGAVQSVTDFGI
CCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHEECCCCCCCCCCCHHHHHHHCCC
KGFGGPCPPVGHGFHQYIITVYALKTDKLGTDENTNPAVVGFNLWNQTLAKASIIAYYKR
CCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]