| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299706
Identifier: 146299706
GI number: 146299706
Start: 2252531
End: 2253268
Strand: Direct
Name: 146299706
Synonym: Fjoh_1946
Alternate gene names: NA
Gene position: 2252531-2253268 (Clockwise)
Preceding gene: 146299705
Following gene: 146299709
Centisome position: 36.95
GC content: 29.13
Gene sequence:
>738_bases ATGAAAAAGAAATTCACCTTAGAAATAGCAAATCCTTGTTCTGAAAATTTTGATAAAATGATTCCTAATGCAAATGGTTC ATTTTGTAATTCCTGCATGAAAAATGTGATTGATTTAAGTAAGAAAACAAATTCTGAAGTTGCTAAATTCATTGCAGAAA ATAAAGACAGAGCTATTTGTGCGAGACTAAAAACTACACAGTTAGAAGAACAGTTCGAATACAATGAAATTTCTAAAATC AATACTTTAAAATATGCAGCAGTTGCAGCATCCGTTTTATTGGCCTCAAATCTTTCAGCGCAAGAAAAAGAACCTGTTAA AACAGAAATAAGCTCCCCGAAACCTAATACTTATAAAGTAGGGAAAGTGGCTTATAACCATACTGCAAATCAAGAAATTT CTATAATTATAAAAGGAAGATTATTGGAAGCAAATACAATCAAGCCTTTTAATAGAGAAACATACCCTAATTTAATGCTT GCTGTTGACGGTTCACAAATTCCTGTAAAAGTTAATCCTAAAACTGGAGAATTTTCGATAGAAACTAAAATTTTAAAAAA CAGTAAATCACTAATGGTTACAATTACCGGAAATGATTATTATCTGTCAAAAGAAATAGATTTCGATTTAAAATCAGTTA AAAATAATGTTTTGACACAAAATATAATTATTGGAGCAGAAGAACTTACTAAAATCTATATTGCTGGCGGATTAGGAATT AATTACACAAAGCAATAA
Upstream 100 bases:
>100_bases ATTGTAAAATATTTTATTTTCTTCCCAACCTTTTTATAAAAAATATACTCTATATAAGTAAGAGCGATTCAGAAGTTTTT TAACTTAAATAAAGTATAGT
Downstream 100 bases:
>100_bases TTAAATTTACATTTTGGGGAATGTAAATGAAAAAGGCTGTCTAAATCATAGACAGCCTTTTGGTATTTTTTATCTAAAGG ATATTAATCAAATTCAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKKKFTLEIANPCSENFDKMIPNANGSFCNSCMKNVIDLSKKTNSEVAKFIAENKDRAICARLKTTQLEEQFEYNEISKI NTLKYAAVAASVLLASNLSAQEKEPVKTEISSPKPNTYKVGKVAYNHTANQEISIIIKGRLLEANTIKPFNRETYPNLML AVDGSQIPVKVNPKTGEFSIETKILKNSKSLMVTITGNDYYLSKEIDFDLKSVKNNVLTQNIIIGAEELTKIYIAGGLGI NYTKQ
Sequences:
>Translated_245_residues MKKKFTLEIANPCSENFDKMIPNANGSFCNSCMKNVIDLSKKTNSEVAKFIAENKDRAICARLKTTQLEEQFEYNEISKI NTLKYAAVAASVLLASNLSAQEKEPVKTEISSPKPNTYKVGKVAYNHTANQEISIIIKGRLLEANTIKPFNRETYPNLML AVDGSQIPVKVNPKTGEFSIETKILKNSKSLMVTITGNDYYLSKEIDFDLKSVKNNVLTQNIIIGAEELTKIYIAGGLGI NYTKQ >Mature_245_residues MKKKFTLEIANPCSENFDKMIPNANGSFCNSCMKNVIDLSKKTNSEVAKFIAENKDRAICARLKTTQLEEQFEYNEISKI NTLKYAAVAASVLLASNLSAQEKEPVKTEISSPKPNTYKVGKVAYNHTANQEISIIIKGRLLEANTIKPFNRETYPNLML AVDGSQIPVKVNPKTGEFSIETKILKNSKSLMVTITGNDYYLSKEIDFDLKSVKNNVLTQNIIIGAEELTKIYIAGGLGI NYTKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27271; Mature: 27271
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKFTLEIANPCSENFDKMIPNANGSFCNSCMKNVIDLSKKTNSEVAKFIAENKDRAIC CCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEE ARLKTTQLEEQFEYNEISKINTLKYAAVAASVLLASNLSAQEKEPVKTEISSPKPNTYKV HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEE GKVAYNHTANQEISIIIKGRLLEANTIKPFNRETYPNLMLAVDGSQIPVKVNPKTGEFSI EEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEE ETKILKNSKSLMVTITGNDYYLSKEIDFDLKSVKNNVLTQNIIIGAEELTKIYIAGGLGI EEEEEECCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHEEEEHHHHEEEEEECCCCC NYTKQ CCCCC >Mature Secondary Structure MKKKFTLEIANPCSENFDKMIPNANGSFCNSCMKNVIDLSKKTNSEVAKFIAENKDRAIC CCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEE ARLKTTQLEEQFEYNEISKINTLKYAAVAASVLLASNLSAQEKEPVKTEISSPKPNTYKV HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEE GKVAYNHTANQEISIIIKGRLLEANTIKPFNRETYPNLMLAVDGSQIPVKVNPKTGEFSI EEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEE ETKILKNSKSLMVTITGNDYYLSKEIDFDLKSVKNNVLTQNIIIGAEELTKIYIAGGLGI EEEEEECCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHEEEEHHHHEEEEEECCCCC NYTKQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA