Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146299678

Identifier: 146299678

GI number: 146299678

Start: 2216987

End: 2217583

Strand: Direct

Name: 146299678

Synonym: Fjoh_1918

Alternate gene names: NA

Gene position: 2216987-2217583 (Clockwise)

Preceding gene: 146299677

Following gene: 146299680

Centisome position: 36.36

GC content: 29.98

Gene sequence:

>597_bases
ATGAGAAATAAAATCCTAATTCTAGTTACAATTCTGGCATTATATTCATGTCAGAATAAAAATGATTCAAAAAATATTGT
CAAAACAATTGTTCAGGATACTTTATCTAAAACAATAGGGGGAACAGCAAATTTAAGCGATGCTCCGCCAAGAGATGATA
AAGCAGTAGAGCTGATACGAAAACAATTGAATGTTTTATTAAAAAAAGATATTCCTGCAATGACAAAAGAAGATCGTTAT
TTTTATTACGAAGAATTTGATTTGAATAACGATAAGAAAAACGAGTATTTTGTTGGGTTTTCTAATTCTTATTTCTGCGG
AAGCGGAGGCTGTTCCGGATATATTTTAAATAACGATGGAAGTGTAATTAATCATTTTACCGTGACCGATTTTCCAATTT
ATGTTACGACTTCTTCTACTGAAAAGTTTTATGATCTTTTGATGAAAAGCGGCGGTTTATTTCATCATATAAAAATGAAA
AACGGAAAATATCCTTCGATTCCATCTATAGAAGAAAAATGGAAAGGAGATGTTCCTAAAGAAACTACCAAGGTTTTGGA
TATCAATGATAAAAAGTATGAAAAATATTCGTTCTAA

Upstream 100 bases:

>100_bases
GAAAATAAAACAGCTCTGCTGGTTTAAATTATGTAGGCGTAAACTCGGTTTCAAAAAACTGCTAAGTTTGGAAGGAATTT
ATAATTTAAAAAATCAGATT

Downstream 100 bases:

>100_bases
AAAGAAAACCCGACAGGTTTTTAAAACCTGTCGGGTTTGAATATTATAAGATCCAATTTGGAATTTAACCAACTAGTTCC
ACAAATTTAAACTCTCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRNKILILVTILALYSCQNKNDSKNIVKTIVQDTLSKTIGGTANLSDAPPRDDKAVELIRKQLNVLLKKDIPAMTKEDRY
FYYEEFDLNNDKKNEYFVGFSNSYFCGSGGCSGYILNNDGSVINHFTVTDFPIYVTTSSTEKFYDLLMKSGGLFHHIKMK
NGKYPSIPSIEEKWKGDVPKETTKVLDINDKKYEKYSF

Sequences:

>Translated_198_residues
MRNKILILVTILALYSCQNKNDSKNIVKTIVQDTLSKTIGGTANLSDAPPRDDKAVELIRKQLNVLLKKDIPAMTKEDRY
FYYEEFDLNNDKKNEYFVGFSNSYFCGSGGCSGYILNNDGSVINHFTVTDFPIYVTTSSTEKFYDLLMKSGGLFHHIKMK
NGKYPSIPSIEEKWKGDVPKETTKVLDINDKKYEKYSF
>Mature_198_residues
MRNKILILVTILALYSCQNKNDSKNIVKTIVQDTLSKTIGGTANLSDAPPRDDKAVELIRKQLNVLLKKDIPAMTKEDRY
FYYEEFDLNNDKKNEYFVGFSNSYFCGSGGCSGYILNNDGSVINHFTVTDFPIYVTTSSTEKFYDLLMKSGGLFHHIKMK
NGKYPSIPSIEEKWKGDVPKETTKVLDINDKKYEKYSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22633; Mature: 22633

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKILILVTILALYSCQNKNDSKNIVKTIVQDTLSKTIGGTANLSDAPPRDDKAVELIR
CCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
KQLNVLLKKDIPAMTKEDRYFYYEEFDLNNDKKNEYFVGFSNSYFCGSGGCSGYILNNDG
HHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCEEECCCCCEEEEECCCC
SVINHFTVTDFPIYVTTSSTEKFYDLLMKSGGLFHHIKMKNGKYPSIPSIEEKWKGDVPK
CEEEEEEEECEEEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHCCCCCC
ETTKVLDINDKKYEKYSF
CCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRNKILILVTILALYSCQNKNDSKNIVKTIVQDTLSKTIGGTANLSDAPPRDDKAVELIR
CCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
KQLNVLLKKDIPAMTKEDRYFYYEEFDLNNDKKNEYFVGFSNSYFCGSGGCSGYILNNDG
HHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCEEECCCCCEEEEECCCC
SVINHFTVTDFPIYVTTSSTEKFYDLLMKSGGLFHHIKMKNGKYPSIPSIEEKWKGDVPK
CEEEEEEEECEEEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHCCCCCC
ETTKVLDINDKKYEKYSF
CCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA