| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299558
Identifier: 146299558
GI number: 146299558
Start: 2079416
End: 2080207
Strand: Direct
Name: 146299558
Synonym: Fjoh_1798
Alternate gene names: NA
Gene position: 2079416-2080207 (Clockwise)
Preceding gene: 146299557
Following gene: 146299562
Centisome position: 34.11
GC content: 26.39
Gene sequence:
>792_bases ATGAAAAAAATAATACTGCTATTGCTTCTATCATTTTTGTCGTGTGCAAAAAAAGACAGGATAAACCACTATTTGCCAAA GCCCGTAACGCCAAAAGAGTTGATGGATAATGGTTTTTACAGATATAACTACAAAATGAAAATAATATTATTACTATTAA TATCACTACTACTGTTTAATTCATGTCAGAAAATTGATAGAATCAACCATTATACAAATGAACTTGTAACTCAAAAAGAA TTAGCTGACAATGGATTCTATAAATATTCAATGACAGGATTGGAAGGAATTGTTAATGAGAAGCATACTTTAAAAGATGG AGATCCTGTAGTTCCATCAAAATTTACAAAATTCATTATGGTTGTTTATACTAATATTGCCCCAACAAATAATGATAAAC GACCTATTCCTGTTTTTAAAGATAGCAATGCAATAAAAGGAAAAATTATTACCTATTTTTTTAAAAATGATATTTTAGAA TTCAAAAGTATAATTAGCCCTATTGACAATAACAATCAACAAAAGGGATTGTTTAAAACAAAAAAGGATATTGAGCAATA TTATAAAGAATTAAAAATTCCTATTAAAGAAATACCTCTTGAAAAATTACGCAATCATAACGACAGTATTGGTTTAAGAT CAAGGTTTATAATAAATAATTATGAGTCGTACTTCTATTTATCGGATAGGAACGAAATGACAACATATTATATAAAAGAT AAAAAAGGAAATGAAGATATGCTTGTTTGGGATTTTTATAATGAAAATTCCCCTTATAAATATGTTGAATAG
Upstream 100 bases:
>100_bases TCAATTATAATTATCTTGATTTATTTTATTTTCGAATTGTTTTTGACTTTTTTTATAGTTAACAAGCTTTATCAATCAAA AGATCACGAATAAATTTCTA
Downstream 100 bases:
>100_bases GATAATACTTTTTATAATTTGATATGGCGTTTTTGAAAGAATGACAAAATTTGTTGCAGAAAATAAATGTTCTCTAAAAG GAATAATTGATTATGAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKKIILLLLLSFLSCAKKDRINHYLPKPVTPKELMDNGFYRYNYKMKIILLLLISLLLFNSCQKIDRINHYTNELVTQKE LADNGFYKYSMTGLEGIVNEKHTLKDGDPVVPSKFTKFIMVVYTNIAPTNNDKRPIPVFKDSNAIKGKIITYFFKNDILE FKSIISPIDNNNQQKGLFKTKKDIEQYYKELKIPIKEIPLEKLRNHNDSIGLRSRFIINNYESYFYLSDRNEMTTYYIKD KKGNEDMLVWDFYNENSPYKYVE
Sequences:
>Translated_263_residues MKKIILLLLLSFLSCAKKDRINHYLPKPVTPKELMDNGFYRYNYKMKIILLLLISLLLFNSCQKIDRINHYTNELVTQKE LADNGFYKYSMTGLEGIVNEKHTLKDGDPVVPSKFTKFIMVVYTNIAPTNNDKRPIPVFKDSNAIKGKIITYFFKNDILE FKSIISPIDNNNQQKGLFKTKKDIEQYYKELKIPIKEIPLEKLRNHNDSIGLRSRFIINNYESYFYLSDRNEMTTYYIKD KKGNEDMLVWDFYNENSPYKYVE >Mature_263_residues MKKIILLLLLSFLSCAKKDRINHYLPKPVTPKELMDNGFYRYNYKMKIILLLLISLLLFNSCQKIDRINHYTNELVTQKE LADNGFYKYSMTGLEGIVNEKHTLKDGDPVVPSKFTKFIMVVYTNIAPTNNDKRPIPVFKDSNAIKGKIITYFFKNDILE FKSIISPIDNNNQQKGLFKTKKDIEQYYKELKIPIKEIPLEKLRNHNDSIGLRSRFIINNYESYFYLSDRNEMTTYYIKD KKGNEDMLVWDFYNENSPYKYVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31173; Mature: 31173
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIILLLLLSFLSCAKKDRINHYLPKPVTPKELMDNGFYRYNYKMKIILLLLISLLLFN CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEECHHHHHHHHHHHHHHHH SCQKIDRINHYTNELVTQKELADNGFYKYSMTGLEGIVNEKHTLKDGDPVVPSKFTKFIM HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCCCCCHHHHHHEEH VVYTNIAPTNNDKRPIPVFKDSNAIKGKIITYFFKNDILEFKSIISPIDNNNQQKGLFKT HEEECCCCCCCCCCCCCEEECCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHH KKDIEQYYKELKIPIKEIPLEKLRNHNDSIGLRSRFIINNYESYFYLSDRNEMTTYYIKD HHHHHHHHHHHCCCHHHCCHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEEEEEC KKGNEDMLVWDFYNENSPYKYVE CCCCCCEEEEEEECCCCCEECCC >Mature Secondary Structure MKKIILLLLLSFLSCAKKDRINHYLPKPVTPKELMDNGFYRYNYKMKIILLLLISLLLFN CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEECHHHHHHHHHHHHHHHH SCQKIDRINHYTNELVTQKELADNGFYKYSMTGLEGIVNEKHTLKDGDPVVPSKFTKFIM HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCCCCCHHHHHHEEH VVYTNIAPTNNDKRPIPVFKDSNAIKGKIITYFFKNDILEFKSIISPIDNNNQQKGLFKT HEEECCCCCCCCCCCCCEEECCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHH KKDIEQYYKELKIPIKEIPLEKLRNHNDSIGLRSRFIINNYESYFYLSDRNEMTTYYIKD HHHHHHHHHHHCCCHHHCCHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCCEEEEEEEC KKGNEDMLVWDFYNENSPYKYVE CCCCCCEEEEEEECCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA