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The map label for this gene is yoaV [H]

Identifier: 146299489

GI number: 146299489

Start: 2003024

End: 2003929

Strand: Direct

Name: yoaV [H]

Synonym: Fjoh_1729

Alternate gene names: 146299489

Gene position: 2003024-2003929 (Clockwise)

Preceding gene: 146299488

Following gene: 146299492

Centisome position: 32.85

GC content: 32.67

Gene sequence:

>906_bases
ATGAAACAAAGCTTAGATTATAAATTAATATTTGCCTTAGCGGCTGTTGGAATTATTTGGGGAACTACCTTTTTGGGGAT
TAGAGTTGCGGTTGAAACTATTCCGCCTTGGTTTGTAACTTCAATTCGTCAGGGATTGGCAGGAATAATCATGATGATTA
TTTTATTGTTCAAAAAAGAATTGAAATGGATTGGGTGGGAGAATTTAAAACACCAGCTCGTTCCTTCTATTTTGATGATT
GTAATTGCAAATGGTTTTACAACCGTTGCTGAGCAGACTGTGCCAAGCGGACTTGCTTCGGTAATTAGTGCTATGGCTCC
TATACTTATTTTTCTGGGCAGTATTTTATTTAAATTACAAAAACCAAGTTTAAGAGGATTTATTGGAGTCATAATAGGAT
TTTCGGGAGTGGTTTTTATATTTAAAGACGGACTAGGATCTTTTTTAGATGCCGATTATAGAATTGGAATGATGTTTATG
GGATTTGCAATTACTGCTTGGGCGGCCGGAACAATTTATACCAAACTTCATGGGAATAAATCTAAAAATATAGTTCTTAA
TTTATTTTACCAGTTTACAATGGCTTCGTGCATTCAGATTGTTTTGGCATTTATTTTTTCGCCCACTATTGATGTGAATT
TATGGAGTACTAAAAGTATTTTTGCGGCATTATATTTGTCAATTTTCGGATCTGTAATTGCTTTTTTCAGCTATAATTAT
GCTCTGAAACACGTTACTCCGGTTCAGGTTTCTATTTTAGCCTATATCAATACTATAATTGCGGTATTTTTTGGCTGGCT
GATTTTGGATGAAAAAATTACAATTGATTTTATAATTGCAACTATTCTAATCATTTTGGGAGTTTTTATTATTAATTACA
AAAAGAAGGAAAAGAAAACTTTATAA

Upstream 100 bases:

>100_bases
TGAGGAATAAATAAATTCTTTATTAGTTAAAATTATAAAATTTTAAGATCCCAAATTATAGCAGTATAGTTTGGGATTTT
TTTTTAACGTATTAATTATC

Downstream 100 bases:

>100_bases
TGTAAATTCTAAAAGGATATCTTTTTTATTTTTCTTTTTAGTATGTCATTTCGACGAAGGAGAAATCTTCGCAAGTAGTT
CGGCAAAGTTTTTGGACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKQSLDYKLIFALAAVGIIWGTTFLGIRVAVETIPPWFVTSIRQGLAGIIMMIILLFKKELKWIGWENLKHQLVPSILMI
VIANGFTTVAEQTVPSGLASVISAMAPILIFLGSILFKLQKPSLRGFIGVIIGFSGVVFIFKDGLGSFLDADYRIGMMFM
GFAITAWAAGTIYTKLHGNKSKNIVLNLFYQFTMASCIQIVLAFIFSPTIDVNLWSTKSIFAALYLSIFGSVIAFFSYNY
ALKHVTPVQVSILAYINTIIAVFFGWLILDEKITIDFIIATILIILGVFIINYKKKEKKTL

Sequences:

>Translated_301_residues
MKQSLDYKLIFALAAVGIIWGTTFLGIRVAVETIPPWFVTSIRQGLAGIIMMIILLFKKELKWIGWENLKHQLVPSILMI
VIANGFTTVAEQTVPSGLASVISAMAPILIFLGSILFKLQKPSLRGFIGVIIGFSGVVFIFKDGLGSFLDADYRIGMMFM
GFAITAWAAGTIYTKLHGNKSKNIVLNLFYQFTMASCIQIVLAFIFSPTIDVNLWSTKSIFAALYLSIFGSVIAFFSYNY
ALKHVTPVQVSILAYINTIIAVFFGWLILDEKITIDFIIATILIILGVFIINYKKKEKKTL
>Mature_301_residues
MKQSLDYKLIFALAAVGIIWGTTFLGIRVAVETIPPWFVTSIRQGLAGIIMMIILLFKKELKWIGWENLKHQLVPSILMI
VIANGFTTVAEQTVPSGLASVISAMAPILIFLGSILFKLQKPSLRGFIGVIIGFSGVVFIFKDGLGSFLDADYRIGMMFM
GFAITAWAAGTIYTKLHGNKSKNIVLNLFYQFTMASCIQIVLAFIFSPTIDVNLWSTKSIFAALYLSIFGSVIAFFSYNY
ALKHVTPVQVSILAYINTIIAVFFGWLILDEKITIDFIIATILIILGVFIINYKKKEKKTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=307, Percent_Identity=28.3387622149837, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33480; Mature: 33480

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSLDYKLIFALAAVGIIWGTTFLGIRVAVETIPPWFVTSIRQGLAGIIMMIILLFKKE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LKWIGWENLKHQLVPSILMIVIANGFTTVAEQTVPSGLASVISAMAPILIFLGSILFKLQ
HHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KPSLRGFIGVIIGFSGVVFIFKDGLGSFLDADYRIGMMFMGFAITAWAAGTIYTKLHGNK
CCCHHHHHHHHHHHHHHEEEEHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCC
SKNIVLNLFYQFTMASCIQIVLAFIFSPTIDVNLWSTKSIFAALYLSIFGSVIAFFSYNY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
ALKHVTPVQVSILAYINTIIAVFFGWLILDEKITIDFIIATILIILGVFIINYKKKEKKT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCC
L
C
>Mature Secondary Structure
MKQSLDYKLIFALAAVGIIWGTTFLGIRVAVETIPPWFVTSIRQGLAGIIMMIILLFKKE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LKWIGWENLKHQLVPSILMIVIANGFTTVAEQTVPSGLASVISAMAPILIFLGSILFKLQ
HHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KPSLRGFIGVIIGFSGVVFIFKDGLGSFLDADYRIGMMFMGFAITAWAAGTIYTKLHGNK
CCCHHHHHHHHHHHHHHEEEEHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCC
SKNIVLNLFYQFTMASCIQIVLAFIFSPTIDVNLWSTKSIFAALYLSIFGSVIAFFSYNY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
ALKHVTPVQVSILAYINTIIAVFFGWLILDEKITIDFIIATILIILGVFIINYKKKEKKT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]