Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is yozB [H]

Identifier: 146299424

GI number: 146299424

Start: 1933224

End: 1933766

Strand: Direct

Name: yozB [H]

Synonym: Fjoh_1664

Alternate gene names: 146299424

Gene position: 1933224-1933766 (Clockwise)

Preceding gene: 146299423

Following gene: 146299425

Centisome position: 31.71

GC content: 31.31

Gene sequence:

>543_bases
ATGGAAGATCATTCATTAGAAAAAAAATACAATAAATTTATTGTTGCGGTTTCAATTATTATCCCGGTTGTTGTAGCAAT
CCTTTTTGGAATTAAATTAAAAGATTTCGGAATTAACGTTGAACCGCTTTCATTTCTGCCTCCAATTTATGCAACTACAA
ATGGTATTACAGCCATTGTTTTAGTTTGGGCTGTAATTGCTGTTAAAAACGGAAAACTTAAATTACACGAACGATTAATG
ACTTTTGCGATTGCATTGTCTGTAGCGTTTTTAGTAATGTACGTTGCGTATCACATGACTTCAGATTCGACTAAATTTGG
CGGTGAAGGAATTATACGTTATGTGTATTTCTTTATTTTATTAACTCATATTTTATTGTCTATAGCAATTATCCCATTAG
TATTGATTACTTATGTTAGAGCACTTGCGCAAAGATTCGACAGACATAAAAAAATAGCTAAAATTACTTTTCCGCTTTGG
TTGTATGTTGCGGTTACAGGAGTTGTAGTTTATTTAATGATTTCTCCTTACTATGTATACTAA

Upstream 100 bases:

>100_bases
AAGATGAATTTGGAAACCCAAATATCTACTACGACGGTTTAGATAAAAAAGGAGTTAGAGATATTCAACAAGACATTAAA
ATACTATTAGAAGAATAAAA

Downstream 100 bases:

>100_bases
AAATAAAATATCAAATTTTCAAACTCTAAATTCCAAATTGAAAAAATTGGTTTTTGGAATTTGTCTGTTCTTAGTTGGAA
TTTCAGCAAACGCTCAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MEDHSLEKKYNKFIVAVSIIIPVVVAILFGIKLKDFGINVEPLSFLPPIYATTNGITAIVLVWAVIAVKNGKLKLHERLM
TFAIALSVAFLVMYVAYHMTSDSTKFGGEGIIRYVYFFILLTHILLSIAIIPLVLITYVRALAQRFDRHKKIAKITFPLW
LYVAVTGVVVYLMISPYYVY

Sequences:

>Translated_180_residues
MEDHSLEKKYNKFIVAVSIIIPVVVAILFGIKLKDFGINVEPLSFLPPIYATTNGITAIVLVWAVIAVKNGKLKLHERLM
TFAIALSVAFLVMYVAYHMTSDSTKFGGEGIIRYVYFFILLTHILLSIAIIPLVLITYVRALAQRFDRHKKIAKITFPLW
LYVAVTGVVVYLMISPYYVY
>Mature_180_residues
MEDHSLEKKYNKFIVAVSIIIPVVVAILFGIKLKDFGINVEPLSFLPPIYATTNGITAIVLVWAVIAVKNGKLKLHERLM
TFAIALSVAFLVMYVAYHMTSDSTKFGGEGIIRYVYFFILLTHILLSIAIIPLVLITYVRALAQRFDRHKKIAKITFPLW
LYVAVTGVVVYLMISPYYVY

Specific function: Unknown

COG id: COG2322

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007352 [H]

Pfam domain/function: PF04238 DUF420 [H]

EC number: NA

Molecular weight: Translated: 20389; Mature: 20389

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDHSLEKKYNKFIVAVSIIIPVVVAILFGIKLKDFGINVEPLSFLPPIYATTNGITAIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHCCCHHHCCCHHHHHH
LVWAVIAVKNGKLKLHERLMTFAIALSVAFLVMYVAYHMTSDSTKFGGEGIIRYVYFFIL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LTHILLSIAIIPLVLITYVRALAQRFDRHKKIAKITFPLWLYVAVTGVVVYLMISPYYVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
>Mature Secondary Structure
MEDHSLEKKYNKFIVAVSIIIPVVVAILFGIKLKDFGINVEPLSFLPPIYATTNGITAIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHCCCHHHCCCHHHHHH
LVWAVIAVKNGKLKLHERLMTFAIALSVAFLVMYVAYHMTSDSTKFGGEGIIRYVYFFIL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LTHILLSIAIIPLVLITYVRALAQRFDRHKKIAKITFPLWLYVAVTGVVVYLMISPYYVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]