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The map label for this gene is scoP [H]

Identifier: 146299423

GI number: 146299423

Start: 1932535

End: 1933221

Strand: Direct

Name: scoP [H]

Synonym: Fjoh_1663

Alternate gene names: 146299423

Gene position: 1932535-1933221 (Clockwise)

Preceding gene: 146299422

Following gene: 146299424

Centisome position: 31.7

GC content: 30.57

Gene sequence:

>687_bases
ATGTTCAAAAATAAATCTTACATCGGGATTTCGTTTATTATTTTGATTTTCGGAATCTATGCAGTGCCAAAAATTGTTGA
TAGAATTAAAAATGGTGATGTTGTAAAAGGAAATCGATTAGATAATGTAGGTTCTAAAAGTTCTAAAGATGCAAAATTAT
TAACGATTGGTCCGGCTCCAAAATTTGAATTAACAAATCAGGACAACGTTAAAATATCTAATGAAACGTATAAAGGAAAA
GTGTATGTTTTAGAATTTTTCTTTACAACCTGCCCATCAATCTGTCCAAAGATGAATATGAGTATGCTGGAAATTGAAAA
AACATTCTTTGGTAATCCAAATTTTGGTATTGTTTCAATTACAATTGATCCGGTTCATGATACACCTCAGGTTTTAAAAG
ATCATGCAAAACTATTGGGAGTAAAATCTGCTTCATGGAATTTCCTAACAGGAGACAAAGCAACTATTATGGATTTGTCA
AATAAAGGATTTAATCTATATGCCGGCGAAAATTCAAAAGTAAACGGAGGTTTTGAGCACTCAGGATTATTTGCTTTAAT
TGATAAAGACGGAAATATTCGCTGTAGAAAAGATGAATTTGGAAACCCAAATATCTACTACGACGGTTTAGATAAAAAAG
GAGTTAGAGATATTCAACAAGACATTAAAATACTATTAGAAGAATAA

Upstream 100 bases:

>100_bases
TAATGAAATGCTGGATGACTTTAAAATCATTTTGTATGAATACCGTGCTGCTCTTAAAAAGAACCATAATGCCACAAAAC
AACTTTAAAACTTACGAATA

Downstream 100 bases:

>100_bases
AAATGGAAGATCATTCATTAGAAAAAAAATACAATAAATTTATTGTTGCGGTTTCAATTATTATCCCGGTTGTTGTAGCA
ATCCTTTTTGGAATTAAATT

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MFKNKSYIGISFIILIFGIYAVPKIVDRIKNGDVVKGNRLDNVGSKSSKDAKLLTIGPAPKFELTNQDNVKISNETYKGK
VYVLEFFFTTCPSICPKMNMSMLEIEKTFFGNPNFGIVSITIDPVHDTPQVLKDHAKLLGVKSASWNFLTGDKATIMDLS
NKGFNLYAGENSKVNGGFEHSGLFALIDKDGNIRCRKDEFGNPNIYYDGLDKKGVRDIQQDIKILLEE

Sequences:

>Translated_228_residues
MFKNKSYIGISFIILIFGIYAVPKIVDRIKNGDVVKGNRLDNVGSKSSKDAKLLTIGPAPKFELTNQDNVKISNETYKGK
VYVLEFFFTTCPSICPKMNMSMLEIEKTFFGNPNFGIVSITIDPVHDTPQVLKDHAKLLGVKSASWNFLTGDKATIMDLS
NKGFNLYAGENSKVNGGFEHSGLFALIDKDGNIRCRKDEFGNPNIYYDGLDKKGVRDIQQDIKILLEE
>Mature_228_residues
MFKNKSYIGISFIILIFGIYAVPKIVDRIKNGDVVKGNRLDNVGSKSSKDAKLLTIGPAPKFELTNQDNVKISNETYKGK
VYVLEFFFTTCPSICPKMNMSMLEIEKTFFGNPNFGIVSITIDPVHDTPQVLKDHAKLLGVKSASWNFLTGDKATIMDLS
NKGFNLYAGENSKVNGGFEHSGLFALIDKDGNIRCRKDEFGNPNIYYDGLDKKGVRDIQQDIKILLEE

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 25459; Mature: 25459

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKNKSYIGISFIILIFGIYAVPKIVDRIKNGDVVKGNRLDNVGSKSSKDAKLLTIGPAP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEECCCC
KFELTNQDNVKISNETYKGKVYVLEFFFTTCPSICPKMNMSMLEIEKTFFGNPNFGIVSI
CEEECCCCCEEECCCCCCCEEEEEEEHHHHHHHHCCCCCCHHEEEHHHHCCCCCCEEEEE
TIDPVHDTPQVLKDHAKLLGVKSASWNFLTGDKATIMDLSNKGFNLYAGENSKVNGGFEH
EEECCCCCHHHHHHHHHHEECCCCCCEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCC
SGLFALIDKDGNIRCRKDEFGNPNIYYDGLDKKGVRDIQQDIKILLEE
CCEEEEEECCCCEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFKNKSYIGISFIILIFGIYAVPKIVDRIKNGDVVKGNRLDNVGSKSSKDAKLLTIGPAP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEECCCC
KFELTNQDNVKISNETYKGKVYVLEFFFTTCPSICPKMNMSMLEIEKTFFGNPNFGIVSI
CEEECCCCCEEECCCCCCCEEEEEEEHHHHHHHHCCCCCCHHEEEHHHHCCCCCCEEEEE
TIDPVHDTPQVLKDHAKLLGVKSASWNFLTGDKATIMDLSNKGFNLYAGENSKVNGGFEH
EEECCCCCHHHHHHHHHHEECCCCCCEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCC
SGLFALIDKDGNIRCRKDEFGNPNIYYDGLDKKGVRDIQQDIKILLEE
CCEEEEEECCCCEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226670 [H]