Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146299300

Identifier: 146299300

GI number: 146299300

Start: 1777743

End: 1778303

Strand: Direct

Name: 146299300

Synonym: Fjoh_1540

Alternate gene names: NA

Gene position: 1777743-1778303 (Clockwise)

Preceding gene: 146299299

Following gene: 146299302

Centisome position: 29.16

GC content: 33.87

Gene sequence:

>561_bases
ATGTTAAAAAAAATCCTTTCAGTAACTGCAATTTTGCTGACATTAACAGTCGTAAGCTGTAAAGACGATGTGCTGCCAAA
ACCTGCAGGTTTCCTGAGATTAGATTATCCGGAAGCTAAATACGTTAATTTTGAAAATAACTGCCCCTTTGTTTTTCAGA
TGAATGAAGACGCTGTTATTAAAGGCGAAAAAGACTGCGGATTTGCGATTACTTATCCAAAAATGAAAGCGACTATATAT
TTAACTTACAAACCTGTAAACGGTAATATTGAAAAGCTGTTAAAAGATGCGCAAAAGCTTACTTATGAGCACGTTATTAA
AGCCGATGATATTTTAGAACAGCCTTATATAAATCCTGAAAAAAAGGTTTACGGAATGTTTTATCAGGTTGATGGTAATG
CAGCGACAAACTCTCAGTTTTATGTTACAGACAGTACAAAACATTTTATAGCAGGATCGGTTTATTTTTATGCAAAACCT
AATTTTGATTCGATTATGCCGGCAGCGAGTTATATCAAAAATGACATGCAGCGTATAATGGAAACTTTAAAGTGGAAATA
A

Upstream 100 bases:

>100_bases
TCCTAAAAAAGATCAAAAAATAGCTTTTGAGAATTGTGTTTTTACAATAGAAACCGTTGACAAAAAGCGTGTAAAACAAA
TAAAAGTAACAATAGAATAA

Downstream 100 bases:

>100_bases
AAAATAATTAAGAAATAAAAAACGGCGTTCAATTGAACGCCGTTTTTGTTTGGGTAAAGTTTAAACTTAAGATTTAAAGT
CTGAAACTTTGTATGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Gliding Motility-Associated Lipoprotein GldD; Protein Involved In Gliding Motility Gldd; Protein Involved In Gliding Motility GldD; Gliding Motility-Related Protein; Gliding Motility-Associated Lipoprotein Gldd

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MLKKILSVTAILLTLTVVSCKDDVLPKPAGFLRLDYPEAKYVNFENNCPFVFQMNEDAVIKGEKDCGFAITYPKMKATIY
LTYKPVNGNIEKLLKDAQKLTYEHVIKADDILEQPYINPEKKVYGMFYQVDGNAATNSQFYVTDSTKHFIAGSVYFYAKP
NFDSIMPAASYIKNDMQRIMETLKWK

Sequences:

>Translated_186_residues
MLKKILSVTAILLTLTVVSCKDDVLPKPAGFLRLDYPEAKYVNFENNCPFVFQMNEDAVIKGEKDCGFAITYPKMKATIY
LTYKPVNGNIEKLLKDAQKLTYEHVIKADDILEQPYINPEKKVYGMFYQVDGNAATNSQFYVTDSTKHFIAGSVYFYAKP
NFDSIMPAASYIKNDMQRIMETLKWK
>Mature_186_residues
MLKKILSVTAILLTLTVVSCKDDVLPKPAGFLRLDYPEAKYVNFENNCPFVFQMNEDAVIKGEKDCGFAITYPKMKATIY
LTYKPVNGNIEKLLKDAQKLTYEHVIKADDILEQPYINPEKKVYGMFYQVDGNAATNSQFYVTDSTKHFIAGSVYFYAKP
NFDSIMPAASYIKNDMQRIMETLKWK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21302; Mature: 21302

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKILSVTAILLTLTVVSCKDDVLPKPAGFLRLDYPEAKYVNFENNCPFVFQMNEDAVI
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCEEE
KGEKDCGFAITYPKMKATIYLTYKPVNGNIEKLLKDAQKLTYEHVIKADDILEQPYINPE
ECCCCCCEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC
KKVYGMFYQVDGNAATNSQFYVTDSTKHFIAGSVYFYAKPNFDSIMPAASYIKNDMQRIM
CEEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
ETLKWK
HHHCCC
>Mature Secondary Structure
MLKKILSVTAILLTLTVVSCKDDVLPKPAGFLRLDYPEAKYVNFENNCPFVFQMNEDAVI
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCEEE
KGEKDCGFAITYPKMKATIYLTYKPVNGNIEKLLKDAQKLTYEHVIKADDILEQPYINPE
ECCCCCCEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC
KKVYGMFYQVDGNAATNSQFYVTDSTKHFIAGSVYFYAKPNFDSIMPAASYIKNDMQRIM
CEEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
ETLKWK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA