| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299236
Identifier: 146299236
GI number: 146299236
Start: 1689894
End: 1692419
Strand: Direct
Name: 146299236
Synonym: Fjoh_1476
Alternate gene names: NA
Gene position: 1689894-1692419 (Clockwise)
Preceding gene: 146299235
Following gene: 146299237
Centisome position: 27.72
GC content: 33.57
Gene sequence:
>2526_bases ATGAAGTTTTTTTTTGCCCAGACAATGAAAAGAACAATTTTACTCAGCCTATTTTTTGTATTCGCATTTGCGGCTATTGT TACTGCACAAACAAAAGTGAGTGGAATTGTTTTGGACAAGTCTAATCAGCCGATACCATTTGCAAATGTTGTTTTTAAAG GTTCAAATATTGGAATTGTTTCTAACGAAGACGGTCGTTTTTATTTAGAATCATCAGAAACTTATACAGCATTATTGGTG AGTTCTGCGGGATTTTCAGATAAAGAAGTTCCTTTGGAAAAAGCAGTGAATTATAACTTTAAAATCGTTTTAAGCGAACC AGAAGCATTAAGTGAAGTTGTAATTTATACGGGTAAAACTTCAAAAAAGAATAATCCGGCATTGGATATTTTGAGAAAAA TATGGGAGAGAAAGCGTAAAAACGGGCTTTACCAATTTAATCAATATCAAATGCAGAAGTACGAAAAAGTTGAGTTTGAC ATGAACACAATTGACAGTGCTTTTATGAAAAATAAACTCTTTAAAGGAATGGAGTTTGTTTTTAATCATGTTGATACTTC AGAAGTTACAGGAAAAACCTATCTGCCTATTTTCATTAACGAATCGGTTTATGATGTTTACGGAGATAACAGAATAAAGA AAGTAAAAGAAAACCTTACCGGAAATAAAATGTCTGGTTTTAATGGAAACCAACAGATTTTAGCTTTCGTAAAAGACCTT TATTCAGATTACAATATCTACGATAATCACCTTAAATTTTTTGATAAAAGTTTTACCAGTCCGCTTTCAAGAACCGGAAT TGATGTTTACAATTACGTATTGAAAGACAGTGCTTATATTGATAAAAAATGGTGCTTTAATATTGTTTTTTATCCAAGAC GTAAAAACGAATTAACTTTTAAAGGAGATTTCTGGGTAAACGATACCACTTTTGCGATCAAGAAAATTAATATGGGCGTT ACTAAAAGTGCCAATATTAACTGGGTAAAAGATATTTATATCGAGCAGGAGTTTGAAGTAGAAAACGATTCTGTTTTCCT TTTAACCCGCGATTACATGATGTCTGATTTTGCTTTGAATAAAAAAGAAAAATCAAAAGGAGTTTATGGAAAACGAACGA CCTTGTATCGTAATCATAAATTCAACATTCAAAAACCCGAAAAATTTTATAAAGAAGAAGTCAATTTCATAGATAATGCG GTCTATGAACGACCGCCGGAATTTTGGGAAGAAAATCGTTTTGAGAAATTAAATAAAGACGAAGCGGGTATTTATAAAAT GCTCGATACACTGCAGACGGTCAAACGATTTAAGCAGCTGTATAATCTCGTCTCCATTTTAGGAAGCGGTTATATCGAAT TTAAGAACTTCGATTACGGTCCTATTTATTCTACATTTGGTTATAATGAAGTCGAAGGTTTAAGGCTGAGAGTAGGAGGA AGAACGTATTTTGGACCTAATGATCCTTGGCGTTTGCAGGCTTATACAGCATACGGATTTGACGATAATAAATTCAAATA CGGAGTTTCTGGTAAATGGATGATCGACAAGAAAAAACGTATTATTATTTCTGGAGGAAACAGGCGGGATATTGAACAAA TTGGAGCCAGTTTAACCACAACAAATGATATTTTAGGACGAAGTTTTGCATCGTCGGCCTTGTTTACAACCGGAAGCAAC GGAAAGCTCACGAATATTAATTTGAGCAACGTTTCTATCGAAATGGAGCCTAAAAAGAATTTTCTTGTTTCGGCAGGATT CTCTTATCGAACATTAGAATCGGCTTCAAAGACATTTAGTCTGGATTATTATACCACTTTGCCAAGTGTATCAGATCCGA TGGGAGTGATAAAGAGTGATGTAAAACAATCAGAAGCCAATATCCAATTTGAGTATATGCCAAACCGAAAAACAATTGGT TATGGTGTCGAAAGAGATTTAGTTGACAGTCCTTTTAGTCATTTCTTTGTAAATTTCAGTTATGGTCTTAAAGGAGTTTT AGACAGCGATTTTGCTTACGAAAAAATTCAGGTTTTCTACAAACAGCCTATTATAATTGGACCTTTAGGAAGATCTAATA TTATTTTGGAAACAGGAAAAACATTTGGAACAATTCCATTAGGGTTAATGAGTGTAATTCCGGGTAACCAGACTTATTTT ACAATTGAAAATACGTTTAGCAACCTTAATTTCTACGAATTTGTAACAGATCAATATACTACTTTGCAGTGGAATCATGA TTTTGGAGGAAGATTATTCGCGAGAATTCCGTTTATGAGAAAATTAAACTGGAGAGAGTTTGTAGGAGTTAGAGCGGTTC ATGGAACTATTTCTAAAGCAAATCGCGAAATAAACGCTTCTGGACTTCCTTATAATGCACCAGAAAATGTATATTGGGAA TACAATGCCGGAATTGGAAATATCTTTAAAGTCTTCCGTCTTGATTTTTCTTGGAGAGGAAACTATTTAGATATGCCGGA TGCTCATAAATTTGCTATCAAAGGATCTTTCGGGTTCTATTTTTAA
Upstream 100 bases:
>100_bases TTGCCAAATGCAGGTGATGTAGTAAAAGCAGTTAAAAAAGTGTTATACAAATAGTATATATTTAAAATACTCACAAAACT TCATCATTCATAGTTAATTG
Downstream 100 bases:
>100_bases TTATAAAAGACGCAAAGCTTCAAAGTTACATAGTCGCAAAGGTTTAAAATCTTTGCGGCTTTTTTTATGCTTAATTTTTT TTGCCCGCAGATTCTACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxypeptidase-Like Protein Regulatory Region
Number of amino acids: Translated: 841; Mature: 841
Protein sequence:
>841_residues MKFFFAQTMKRTILLSLFFVFAFAAIVTAQTKVSGIVLDKSNQPIPFANVVFKGSNIGIVSNEDGRFYLESSETYTALLV SSAGFSDKEVPLEKAVNYNFKIVLSEPEALSEVVIYTGKTSKKNNPALDILRKIWERKRKNGLYQFNQYQMQKYEKVEFD MNTIDSAFMKNKLFKGMEFVFNHVDTSEVTGKTYLPIFINESVYDVYGDNRIKKVKENLTGNKMSGFNGNQQILAFVKDL YSDYNIYDNHLKFFDKSFTSPLSRTGIDVYNYVLKDSAYIDKKWCFNIVFYPRRKNELTFKGDFWVNDTTFAIKKINMGV TKSANINWVKDIYIEQEFEVENDSVFLLTRDYMMSDFALNKKEKSKGVYGKRTTLYRNHKFNIQKPEKFYKEEVNFIDNA VYERPPEFWEENRFEKLNKDEAGIYKMLDTLQTVKRFKQLYNLVSILGSGYIEFKNFDYGPIYSTFGYNEVEGLRLRVGG RTYFGPNDPWRLQAYTAYGFDDNKFKYGVSGKWMIDKKKRIIISGGNRRDIEQIGASLTTTNDILGRSFASSALFTTGSN GKLTNINLSNVSIEMEPKKNFLVSAGFSYRTLESASKTFSLDYYTTLPSVSDPMGVIKSDVKQSEANIQFEYMPNRKTIG YGVERDLVDSPFSHFFVNFSYGLKGVLDSDFAYEKIQVFYKQPIIIGPLGRSNIILETGKTFGTIPLGLMSVIPGNQTYF TIENTFSNLNFYEFVTDQYTTLQWNHDFGGRLFARIPFMRKLNWREFVGVRAVHGTISKANREINASGLPYNAPENVYWE YNAGIGNIFKVFRLDFSWRGNYLDMPDAHKFAIKGSFGFYF
Sequences:
>Translated_841_residues MKFFFAQTMKRTILLSLFFVFAFAAIVTAQTKVSGIVLDKSNQPIPFANVVFKGSNIGIVSNEDGRFYLESSETYTALLV SSAGFSDKEVPLEKAVNYNFKIVLSEPEALSEVVIYTGKTSKKNNPALDILRKIWERKRKNGLYQFNQYQMQKYEKVEFD MNTIDSAFMKNKLFKGMEFVFNHVDTSEVTGKTYLPIFINESVYDVYGDNRIKKVKENLTGNKMSGFNGNQQILAFVKDL YSDYNIYDNHLKFFDKSFTSPLSRTGIDVYNYVLKDSAYIDKKWCFNIVFYPRRKNELTFKGDFWVNDTTFAIKKINMGV TKSANINWVKDIYIEQEFEVENDSVFLLTRDYMMSDFALNKKEKSKGVYGKRTTLYRNHKFNIQKPEKFYKEEVNFIDNA VYERPPEFWEENRFEKLNKDEAGIYKMLDTLQTVKRFKQLYNLVSILGSGYIEFKNFDYGPIYSTFGYNEVEGLRLRVGG RTYFGPNDPWRLQAYTAYGFDDNKFKYGVSGKWMIDKKKRIIISGGNRRDIEQIGASLTTTNDILGRSFASSALFTTGSN GKLTNINLSNVSIEMEPKKNFLVSAGFSYRTLESASKTFSLDYYTTLPSVSDPMGVIKSDVKQSEANIQFEYMPNRKTIG YGVERDLVDSPFSHFFVNFSYGLKGVLDSDFAYEKIQVFYKQPIIIGPLGRSNIILETGKTFGTIPLGLMSVIPGNQTYF TIENTFSNLNFYEFVTDQYTTLQWNHDFGGRLFARIPFMRKLNWREFVGVRAVHGTISKANREINASGLPYNAPENVYWE YNAGIGNIFKVFRLDFSWRGNYLDMPDAHKFAIKGSFGFYF >Mature_841_residues MKFFFAQTMKRTILLSLFFVFAFAAIVTAQTKVSGIVLDKSNQPIPFANVVFKGSNIGIVSNEDGRFYLESSETYTALLV SSAGFSDKEVPLEKAVNYNFKIVLSEPEALSEVVIYTGKTSKKNNPALDILRKIWERKRKNGLYQFNQYQMQKYEKVEFD MNTIDSAFMKNKLFKGMEFVFNHVDTSEVTGKTYLPIFINESVYDVYGDNRIKKVKENLTGNKMSGFNGNQQILAFVKDL YSDYNIYDNHLKFFDKSFTSPLSRTGIDVYNYVLKDSAYIDKKWCFNIVFYPRRKNELTFKGDFWVNDTTFAIKKINMGV TKSANINWVKDIYIEQEFEVENDSVFLLTRDYMMSDFALNKKEKSKGVYGKRTTLYRNHKFNIQKPEKFYKEEVNFIDNA VYERPPEFWEENRFEKLNKDEAGIYKMLDTLQTVKRFKQLYNLVSILGSGYIEFKNFDYGPIYSTFGYNEVEGLRLRVGG RTYFGPNDPWRLQAYTAYGFDDNKFKYGVSGKWMIDKKKRIIISGGNRRDIEQIGASLTTTNDILGRSFASSALFTTGSN GKLTNINLSNVSIEMEPKKNFLVSAGFSYRTLESASKTFSLDYYTTLPSVSDPMGVIKSDVKQSEANIQFEYMPNRKTIG YGVERDLVDSPFSHFFVNFSYGLKGVLDSDFAYEKIQVFYKQPIIIGPLGRSNIILETGKTFGTIPLGLMSVIPGNQTYF TIENTFSNLNFYEFVTDQYTTLQWNHDFGGRLFARIPFMRKLNWREFVGVRAVHGTISKANREINASGLPYNAPENVYWE YNAGIGNIFKVFRLDFSWRGNYLDMPDAHKFAIKGSFGFYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97165; Mature: 97165
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFFAQTMKRTILLSLFFVFAFAAIVTAQTKVSGIVLDKSNQPIPFANVVFKGSNIGIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCEEEEEEECCCEEEE SNEDGRFYLESSETYTALLVSSAGFSDKEVPLEKAVNYNFKIVLSEPEALSEVVIYTGKT ECCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCHHCCEEEEEECCC SKKNNPALDILRKIWERKRKNGLYQFNQYQMQKYEKVEFDMNTIDSAFMKNKLFKGMEFV CCCCCHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FNHVDTSEVTGKTYLPIFINESVYDVYGDNRIKKVKENLTGNKMSGFNGNQQILAFVKDL HHCCCCCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH YSDYNIYDNHLKFFDKSFTSPLSRTGIDVYNYVLKDSAYIDKKWCFNIVFYPRRKNELTF HCCCCEEHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCCEECCCEEEEEEEEECCCCCEEE KGDFWVNDTTFAIKKINMGVTKSANINWVKDIYIEQEFEVENDSVFLLTRDYMMSDFALN ECCEEECCCEEEEEEEECCEECCCCCCEEEEEEEEEEEEECCCCEEEEECCHHHHHHHCC KKEKSKGVYGKRTTLYRNHKFNIQKPEKFYKEEVNFIDNAVYERPPEFWEENRFEKLNKD CHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCC EAGIYKMLDTLQTVKRFKQLYNLVSILGSGYIEFKNFDYGPIYSTFGYNEVEGLRLRVGG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECC RTYFGPNDPWRLQAYTAYGFDDNKFKYGVSGKWMIDKKKRIIISGGNRRDIEQIGASLTT EEECCCCCCEEEEEEEEECCCCCCEEECCCCEEEEECCCEEEEECCCCCCHHHHCCCCCC TNDILGRSFASSALFTTGSNGKLTNINLSNVSIEMEPKKNFLVSAGFSYRTLESASKTFS CHHHHHHHHHCCEEEEECCCCEEEEEEECEEEEEECCCCCEEEECCCCCHHHHCCCCEEE LDYYTTLPSVSDPMGVIKSDVKQSEANIQFEYMPNRKTIGYGVERDLVDSPFSHFFVNFS EEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEECCCCCHHHHCCCCHHEEEEEE YGLKGVLDSDFAYEKIQVFYKQPIIIGPLGRSNIILETGKTFGTIPLGLMSVIPGNQTYF CCCCCCCCCCCHHHHHHHHEECCEEEECCCCCCEEEECCCCCCCCCHHHHHHCCCCCEEE TIENTFSNLNFYEFVTDQYTTLQWNHDFGGRLFARIPFMRKLNWREFVGVRAVHGTISKA EEECCCCCCEEEEEECCCEEEEEECCCCCCEEEEECCHHHHCCHHHHHCEEEEHHHHHHC NREINASGLPYNAPENVYWEYNAGIGNIFKVFRLDFSWRGNYLDMPDAHKFAIKGSFGFY CCEECCCCCCCCCCCCEEEEECCCHHHEEEEEEEEEEECCCCCCCCCCCEEEEECCCCCC F C >Mature Secondary Structure MKFFFAQTMKRTILLSLFFVFAFAAIVTAQTKVSGIVLDKSNQPIPFANVVFKGSNIGIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCEEEEEEECCCEEEE SNEDGRFYLESSETYTALLVSSAGFSDKEVPLEKAVNYNFKIVLSEPEALSEVVIYTGKT ECCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCHHCCEEEEEECCC SKKNNPALDILRKIWERKRKNGLYQFNQYQMQKYEKVEFDMNTIDSAFMKNKLFKGMEFV CCCCCHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FNHVDTSEVTGKTYLPIFINESVYDVYGDNRIKKVKENLTGNKMSGFNGNQQILAFVKDL HHCCCCCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH YSDYNIYDNHLKFFDKSFTSPLSRTGIDVYNYVLKDSAYIDKKWCFNIVFYPRRKNELTF HCCCCEEHHHHHHHHHHHCCCHHHCCHHHHHHHHHCCCEECCCEEEEEEEEECCCCCEEE KGDFWVNDTTFAIKKINMGVTKSANINWVKDIYIEQEFEVENDSVFLLTRDYMMSDFALN ECCEEECCCEEEEEEEECCEECCCCCCEEEEEEEEEEEEECCCCEEEEECCHHHHHHHCC KKEKSKGVYGKRTTLYRNHKFNIQKPEKFYKEEVNFIDNAVYERPPEFWEENRFEKLNKD CHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCC EAGIYKMLDTLQTVKRFKQLYNLVSILGSGYIEFKNFDYGPIYSTFGYNEVEGLRLRVGG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECC RTYFGPNDPWRLQAYTAYGFDDNKFKYGVSGKWMIDKKKRIIISGGNRRDIEQIGASLTT EEECCCCCCEEEEEEEEECCCCCCEEECCCCEEEEECCCEEEEECCCCCCHHHHCCCCCC TNDILGRSFASSALFTTGSNGKLTNINLSNVSIEMEPKKNFLVSAGFSYRTLESASKTFS CHHHHHHHHHCCEEEEECCCCEEEEEEECEEEEEECCCCCEEEECCCCCHHHHCCCCEEE LDYYTTLPSVSDPMGVIKSDVKQSEANIQFEYMPNRKTIGYGVERDLVDSPFSHFFVNFS EEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEECCCCCHHHHCCCCHHEEEEEE YGLKGVLDSDFAYEKIQVFYKQPIIIGPLGRSNIILETGKTFGTIPLGLMSVIPGNQTYF CCCCCCCCCCCHHHHHHHHEECCEEEECCCCCCEEEECCCCCCCCCHHHHHHCCCCCEEE TIENTFSNLNFYEFVTDQYTTLQWNHDFGGRLFARIPFMRKLNWREFVGVRAVHGTISKA EEECCCCCCEEEEEECCCEEEEEECCCCCCEEEEECCHHHHCCHHHHHCEEEEHHHHHHC NREINASGLPYNAPENVYWEYNAGIGNIFKVFRLDFSWRGNYLDMPDAHKFAIKGSFGFY CCEECCCCCCCCCCCCEEEEECCCHHHEEEEEEEEEEECCCCCCCCCCCEEEEECCCCCC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA