| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299173
Identifier: 146299173
GI number: 146299173
Start: 1619448
End: 1620005
Strand: Direct
Name: 146299173
Synonym: Fjoh_1413
Alternate gene names: NA
Gene position: 1619448-1620005 (Clockwise)
Preceding gene: 146299172
Following gene: 146299174
Centisome position: 26.56
GC content: 31.0
Gene sequence:
>558_bases ATGAATTTACCAAAGAGATATATTACAAGCGTTGTCACAGTTATTGCTGTGACACTGTTTTTTGGATGCGAAAGTAATTT TAAAGAAGTTCAAAAAATTAACTTCTCAGAGTTTGTTCCGGCAAGTGATGCCGATACTGTGAATATCAAATACACAGATT CTGGTAAAATAACAGGAGTTTTGATAAGCTCAAAAATGCTTGATTATTCTAATCTTGAATTCCCTTTTACAGAATTTCCA AAAGGAATTGATGTTACTTTATACGACAAAAAACAAAAGCGTACCTTTATTAGATCAAATTATGCTGTATCCTATAAAAA TACAAGTATAATAGATTTACAGGGAAAAGTTAAAATTACCTCAGAAGCGGGACAGGTTTTGGAAACAGAACAAATGTTTT TTGATCAAAAAAATGAGTGGTTTTACACAGAAAGAAAATTTAAACTTACAGATGCTAAAGGAGTTTCTTTTGGTCAGGGA ATTGATTTTAGCAAAGACTTTAAAGTGATTAATTCGCAGCGAATAAGCGGTGAATTTGAATCAGACGAAGAATTATAA
Upstream 100 bases:
>100_bases GGATTCTCATTTAATGATAAATGGTTTGTGAAGAGCAAATTCAACTAAACATAAAAATATATGTTTTTATAAGCTCATTA CAATTTATTACATTTGGCAA
Downstream 100 bases:
>100_bases TTATGGGATATTTAAAATACACACAATACGTTTACATCTTATTTGCAGTTTACTTTATCTATGATGGAGTAATAAAGCTT ACCGAAAATAACGAAGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MNLPKRYITSVVTVIAVTLFFGCESNFKEVQKINFSEFVPASDADTVNIKYTDSGKITGVLISSKMLDYSNLEFPFTEFP KGIDVTLYDKKQKRTFIRSNYAVSYKNTSIIDLQGKVKITSEAGQVLETEQMFFDQKNEWFYTERKFKLTDAKGVSFGQG IDFSKDFKVINSQRISGEFESDEEL
Sequences:
>Translated_185_residues MNLPKRYITSVVTVIAVTLFFGCESNFKEVQKINFSEFVPASDADTVNIKYTDSGKITGVLISSKMLDYSNLEFPFTEFP KGIDVTLYDKKQKRTFIRSNYAVSYKNTSIIDLQGKVKITSEAGQVLETEQMFFDQKNEWFYTERKFKLTDAKGVSFGQG IDFSKDFKVINSQRISGEFESDEEL >Mature_185_residues MNLPKRYITSVVTVIAVTLFFGCESNFKEVQKINFSEFVPASDADTVNIKYTDSGKITGVLISSKMLDYSNLEFPFTEFP KGIDVTLYDKKQKRTFIRSNYAVSYKNTSIIDLQGKVKITSEAGQVLETEQMFFDQKNEWFYTERKFKLTDAKGVSFGQG IDFSKDFKVINSQRISGEFESDEEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21187; Mature: 21187
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPKRYITSVVTVIAVTLFFGCESNFKEVQKINFSEFVPASDADTVNIKYTDSGKITGV CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCCCCCEEEEEECCCCCEEEE LISSKMLDYSNLEFPFTEFPKGIDVTLYDKKQKRTFIRSNYAVSYKNTSIIDLQGKVKIT EEECCCCCCCCCCCCHHHCCCCCEEEEECCHHHHHHHHCCEEEEECCCEEEEECCCEEEE SEAGQVLETEQMFFDQKNEWFYTERKFKLTDAKGVSFGQGIDFSKDFKVINSQRISGEFE CCCCCHHHHHHHHHCCCCCEEEECEEEEEECCCCCCCCCCCCCCCCHHEECCEECCCCCC SDEEL CCCCC >Mature Secondary Structure MNLPKRYITSVVTVIAVTLFFGCESNFKEVQKINFSEFVPASDADTVNIKYTDSGKITGV CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCCCCCEEEEEECCCCCEEEE LISSKMLDYSNLEFPFTEFPKGIDVTLYDKKQKRTFIRSNYAVSYKNTSIIDLQGKVKIT EEECCCCCCCCCCCCHHHCCCCCEEEEECCHHHHHHHHCCEEEEECCCEEEEECCCEEEE SEAGQVLETEQMFFDQKNEWFYTERKFKLTDAKGVSFGQGIDFSKDFKVINSQRISGEFE CCCCCHHHHHHHHHCCCCCEEEECEEEEEECCCCCCCCCCCCCCCCHHEECCEECCCCCC SDEEL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA