| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299139
Identifier: 146299139
GI number: 146299139
Start: 1575541
End: 1576644
Strand: Direct
Name: 146299139
Synonym: Fjoh_1379
Alternate gene names: NA
Gene position: 1575541-1576644 (Clockwise)
Preceding gene: 146299138
Following gene: 146299142
Centisome position: 25.84
GC content: 31.61
Gene sequence:
>1104_bases ATGATTTTTGTGTTGTTTGCAATATTAACCACTTATATTGTCAGCATTTCTTTGCTGATTTATGGTTTTGTCAAAGTAAA AAAATATCAAAAAACAGATTTAAAACCACAAACTAGTTTTACAATTATAGTTCCGTTTCGAAATGAAAAAGAAAACCTGC CCAATCTTTTAAACAGCATATCTAACTTAAATTATCCAACAGATTTATTTGATGTGATTTTGGTTGATGATTCTTCAATT GAAAAGTTTCAATTGTCAATTGTTAATTATCAATTGTCAATTATTGATAATATCCGTGTTTCAAATTCTCCAAAAAAAGA TGCCATTACAACAGCAATACAGCACGTAAAAACAGATTGGGTTATTACAACCGATGCTGATTGTATTGTTCCGGAAAACT GGCTTTTGACGTTTGATAATTTTATTCAGGAAAATAAAATTGCAATGCTTGCAGGAGCGGTTTCATACAAATGTGAAAAT TCTTTTTTAGATCATTTTCAGCAATTAGATTTAACAAGTTTGCAAGGTGCTACAATTGGTAGTTTTGGTTTGAACAAAGG CTTTATGTGCAACGGGGCTAATTTTGCCTACAAAAAAACGTTGTTTCAAAGCTTAAACGGTTTCGATGGAAATGACAAAA TTGCCAGCGGTGACGATGTTTTTTTATTGCAGAAAGCAATCGAAATGTTTCCAGATGAGGTGCATTATTTAAAAGCTCAT GAGGCAATTGTACTAACAAAACCTGCCGAAAACTGGAAATCATTATTTCATCAAAGAGTGCGCTGGGCGGCAAAAACAAG TTCTTATAAAAGTACGTTTGGTAAATTTCTGGGAATAATTGTATTCTTCGGAAACTTAAGTCTGGTAATTGCTTTTTTCT TGTTTATTTTCGGAATTATGGGTTATCCATTTTTGGTTTTATCTGCTTTTTTAAAGTTTGCAGTCGATTTTGTTCTGCTT TCCATCACCAATAAATTTTTAACCAAAACCAGAATTAAAAGTCTTTTATTAAGCAGTTTGTTTTATCCTTTTTTCAGTTC TGCTGTGGCTTTATATAGTTTGTTTGGTTCTTATGAATGGAAAGACCGCAGGTTTAGAAGTTAA
Upstream 100 bases:
>100_bases TTGTAATTTTTATAAGCACTTTAATGTGGTTCTTGAATGTCGTTTTACCAGTAGTTTTAGGGAGTTATTTTGTGTTGAAT TTTAAAACCAAAACAACAGA
Downstream 100 bases:
>100_bases ATCAAAAAGCAAATTTCTATAATAAAACTGTGGGATTAATTTTTTATTATAGAAATTACAATAATATTAAGTTGACTATA AATTTTTTCAACTGCCAAGT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Transmembrane Glycosyltransferase; Glycosyl Transferase Family Protein; Glycosyl Transferase Group 2 Family Protein; B-Glycosyltransferase; Transmembrane Glycosyl Transferase; Group 2 Family Glycosyl Transferase; Glycosyl Transferase Family 2 Protein
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MIFVLFAILTTYIVSISLLIYGFVKVKKYQKTDLKPQTSFTIIVPFRNEKENLPNLLNSISNLNYPTDLFDVILVDDSSI EKFQLSIVNYQLSIIDNIRVSNSPKKDAITTAIQHVKTDWVITTDADCIVPENWLLTFDNFIQENKIAMLAGAVSYKCEN SFLDHFQQLDLTSLQGATIGSFGLNKGFMCNGANFAYKKTLFQSLNGFDGNDKIASGDDVFLLQKAIEMFPDEVHYLKAH EAIVLTKPAENWKSLFHQRVRWAAKTSSYKSTFGKFLGIIVFFGNLSLVIAFFLFIFGIMGYPFLVLSAFLKFAVDFVLL SITNKFLTKTRIKSLLLSSLFYPFFSSAVALYSLFGSYEWKDRRFRS
Sequences:
>Translated_367_residues MIFVLFAILTTYIVSISLLIYGFVKVKKYQKTDLKPQTSFTIIVPFRNEKENLPNLLNSISNLNYPTDLFDVILVDDSSI EKFQLSIVNYQLSIIDNIRVSNSPKKDAITTAIQHVKTDWVITTDADCIVPENWLLTFDNFIQENKIAMLAGAVSYKCEN SFLDHFQQLDLTSLQGATIGSFGLNKGFMCNGANFAYKKTLFQSLNGFDGNDKIASGDDVFLLQKAIEMFPDEVHYLKAH EAIVLTKPAENWKSLFHQRVRWAAKTSSYKSTFGKFLGIIVFFGNLSLVIAFFLFIFGIMGYPFLVLSAFLKFAVDFVLL SITNKFLTKTRIKSLLLSSLFYPFFSSAVALYSLFGSYEWKDRRFRS >Mature_367_residues MIFVLFAILTTYIVSISLLIYGFVKVKKYQKTDLKPQTSFTIIVPFRNEKENLPNLLNSISNLNYPTDLFDVILVDDSSI EKFQLSIVNYQLSIIDNIRVSNSPKKDAITTAIQHVKTDWVITTDADCIVPENWLLTFDNFIQENKIAMLAGAVSYKCEN SFLDHFQQLDLTSLQGATIGSFGLNKGFMCNGANFAYKKTLFQSLNGFDGNDKIASGDDVFLLQKAIEMFPDEVHYLKAH EAIVLTKPAENWKSLFHQRVRWAAKTSSYKSTFGKFLGIIVFFGNLSLVIAFFLFIFGIMGYPFLVLSAFLKFAVDFVLL SITNKFLTKTRIKSLLLSSLFYPFFSSAVALYSLFGSYEWKDRRFRS
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41786; Mature: 41786
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFVLFAILTTYIVSISLLIYGFVKVKKYQKTDLKPQTSFTIIVPFRNEKENLPNLLNSI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHH SNLNYPTDLFDVILVDDSSIEKFQLSIVNYQLSIIDNIRVSNSPKKDAITTAIQHVKTDW HCCCCCCHHEEEEEECCCCCCCEEEEEEEEEEEEEECEECCCCCCHHHHHHHHHHHCCCE VITTDADCIVPENWLLTFDNFIQENKIAMLAGAVSYKCENSFLDHFQQLDLTSLQGATIG EEECCCCEECCCCCEEHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC SFGLNKGFMCNGANFAYKKTLFQSLNGFDGNDKIASGDDVFLLQKAIEMFPDEVHYLKAH CCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHC EAIVLTKPAENWKSLFHQRVRWAAKTSSYKSTFGKFLGIIVFFGNLSLVIAFFLFIFGIM CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYPFLVLSAFLKFAVDFVLLSITNKFLTKTRIKSLLLSSLFYPFFSSAVALYSLFGSYEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KDRRFRS CCCCCCC >Mature Secondary Structure MIFVLFAILTTYIVSISLLIYGFVKVKKYQKTDLKPQTSFTIIVPFRNEKENLPNLLNSI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHH SNLNYPTDLFDVILVDDSSIEKFQLSIVNYQLSIIDNIRVSNSPKKDAITTAIQHVKTDW HCCCCCCHHEEEEEECCCCCCCEEEEEEEEEEEEEECEECCCCCCHHHHHHHHHHHCCCE VITTDADCIVPENWLLTFDNFIQENKIAMLAGAVSYKCENSFLDHFQQLDLTSLQGATIG EEECCCCEECCCCCEEHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC SFGLNKGFMCNGANFAYKKTLFQSLNGFDGNDKIASGDDVFLLQKAIEMFPDEVHYLKAH CCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHC EAIVLTKPAENWKSLFHQRVRWAAKTSSYKSTFGKFLGIIVFFGNLSLVIAFFLFIFGIM CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYPFLVLSAFLKFAVDFVLLSITNKFLTKTRIKSLLLSSLFYPFFSSAVALYSLFGSYEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KDRRFRS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA