| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146299062
Identifier: 146299062
GI number: 146299062
Start: 1485466
End: 1485957
Strand: Direct
Name: 146299062
Synonym: Fjoh_1302
Alternate gene names: NA
Gene position: 1485466-1485957 (Clockwise)
Preceding gene: 146299058
Following gene: 146299063
Centisome position: 24.36
GC content: 31.1
Gene sequence:
>492_bases ATGAAAAAAATCTTTTATTTTTTATCGCTTCTATTTGTTTTGGGGTCTTGTACAGAAGATGTAAAATTTAATAATCCAGC TTTTCAAACTTTAAAAAATAATGTTTTTTGGAGGGCTCAAACTTATAAAGCTTATGCAGGCATGCAGGGAGCCATTATAA TTGAAGGTTCTTTAGGATATGAAAAGGTTGCTTTGCAGGCAGCTTCTAAAGAAAAACAAACTTTTGCCCTGGGTGTTAAT GATGTTTCTAAAGCTGTTTACGAAAATACACTTCCTTCTGAAGCGGCTTCATTTTCTACCGGAACTAATATTGGTAACGG ACAGATAACAATTACAGACTACAATGCAGTCAATAATACAATATCAGGGACATTTAAATTTACTGCACTAAATAATGATG AAACAGATATAGAAAATCCTAATATTAATTTTACAGAAGGGGTTTTTTATAAAGTTCCAATTCAAGAGAACGATTATGTT CTTCATTTATAA
Upstream 100 bases:
>100_bases GTCATTAAATATATTTGAGAAGCATTTTTTAGCATTTTTTTGACTTTTATTTTTTAGCACCCTATGTTTTTATGCAATAT TTTTGTGTCAAATTTCTTTT
Downstream 100 bases:
>100_bases TTTTTTATCAGCCCCTTTATTTTACTGATCAGTGCTTTTAAATCTAAATAAAAACTTAAATAAACTAATATATAGTAGAT TACAGAAAAATAAGACTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKKIFYFLSLLFVLGSCTEDVKFNNPAFQTLKNNVFWRAQTYKAYAGMQGAIIIEGSLGYEKVALQAASKEKQTFALGVN DVSKAVYENTLPSEAASFSTGTNIGNGQITITDYNAVNNTISGTFKFTALNNDETDIENPNINFTEGVFYKVPIQENDYV LHL
Sequences:
>Translated_163_residues MKKIFYFLSLLFVLGSCTEDVKFNNPAFQTLKNNVFWRAQTYKAYAGMQGAIIIEGSLGYEKVALQAASKEKQTFALGVN DVSKAVYENTLPSEAASFSTGTNIGNGQITITDYNAVNNTISGTFKFTALNNDETDIENPNINFTEGVFYKVPIQENDYV LHL >Mature_163_residues MKKIFYFLSLLFVLGSCTEDVKFNNPAFQTLKNNVFWRAQTYKAYAGMQGAIIIEGSLGYEKVALQAASKEKQTFALGVN DVSKAVYENTLPSEAASFSTGTNIGNGQITITDYNAVNNTISGTFKFTALNNDETDIENPNINFTEGVFYKVPIQENDYV LHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18066; Mature: 18066
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFYFLSLLFVLGSCTEDVKFNNPAFQTLKNNVFWRAQTYKAYAGMQGAIIIEGSLGY CHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHCCEEEEEEEEHHHCCCCCEEEEECCCCH EKVALQAASKEKQTFALGVNDVSKAVYENTLPSEAASFSTGTNIGNGQITITDYNAVNNT HHHHEECCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC ISGTFKFTALNNDETDIENPNINFTEGVFYKVPIQENDYVLHL CCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEC >Mature Secondary Structure MKKIFYFLSLLFVLGSCTEDVKFNNPAFQTLKNNVFWRAQTYKAYAGMQGAIIIEGSLGY CHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHCCEEEEEEEEHHHCCCCCEEEEECCCCH EKVALQAASKEKQTFALGVNDVSKAVYENTLPSEAASFSTGTNIGNGQITITDYNAVNNT HHHHEECCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC ISGTFKFTALNNDETDIENPNINFTEGVFYKVPIQENDYVLHL CCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA