| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298906
Identifier: 146298906
GI number: 146298906
Start: 1293418
End: 1294815
Strand: Direct
Name: 146298906
Synonym: Fjoh_1145
Alternate gene names: NA
Gene position: 1293418-1294815 (Clockwise)
Preceding gene: 146298905
Following gene: 146298907
Centisome position: 21.21
GC content: 38.13
Gene sequence:
>1398_bases ATGACCGAAAAAACGGATAACAACGAGATTTTATTTGATCCAACGGCATCAAAAACAGAACGCTATGAAAAAGGCAGAGC GATTAGAAAAATTGTGCCCCGCTCCTCTCATCAGCAATATGTGCCGTCAGAAAATCGCGAAGATCCTGTAGACATTTTAA TAAGAACCAGTATAGGAAGAATCGAAAGTTTACTGCCTATCCGATATACCAGAATGATGGAATCGCCTTTCGCATTCTTT CGCGGAGCCGCCGCAATTATGACAGCAGATCTTGAGCAGACGCCCAATACAGGAATAGATTTACAACTCTGCGGTGATTG TCATTTAATGAATTTTGGAGGATTTGCAACGCCAGAACGCAAACTGGTTTTTGATATTAATGATTTTGATGAAACTTTTC CGGGACCTTGGGAATGGGATGTAAAACGATTAGCGGCAAGTTTTGTTATTGCCGGAAAATGGAGAAAATTTTCTAAAAAA AACTGTAAAGAATTTGCCTGGAATGTTGCAGACAGTTACAAAAGACATATGCTGGATTATAGTAAATTATCGGCACTGCA AATTTGGTATGCCGATATAGATCTGGCAGAATTAATAGAATTAGGAAAAGATGAAGAGATAAAAGAGTTTCATCAAAAAA GAATAAAAAAAGCCGCAGAATATACAGCACATGAAAAAGAGTTTGCAAAGATGACGTATCGCGATGGTGTGCGGGCAAGA ATTAAAGACGAACCGCCGTTGATTTATCATCCCTCCGGAAACGAAGAAGATCAAATTTTAAAAGAAGCAGAGATAGTTCA TAAACGATATTTAAAATCACTTCCAGAAGACAAACAGGTTTTATTAAGCCGGTATTCGATGCATGATTTTGCCATAAAAG TAGTAGGTGTAGGAAGTGTTGGCACACTCTGCGGTATTAGTTTGTTAATGTCGGCAACAGGAGAACCTATCTTTCTGCAG TTTAAAGAGGCAAGAAAAAGCGTTTTGGAACAACATGTAAAAGTCAAAGCTAAATACACGCATCAAGGCGAAAGAATTGT AATAGGACAAAAGTTAATGCAGTCAGCCTCAGATATGTTTTTAGGATGGACAAATGACGATAAAGGCCGATTTTTCTATA TCCGTCAGCTTAGAGATGCCAAGGTAAAACCGGTTCTTGAAATTATGAAAGAAGAAAACATGATAGATTATGCCAAAGCC TGCGGATGGGCACTTGCAAGAGCACACGCACGTTCTGGCGATCCTTCTATGCTTTCCGGATATATAGGAGACAGTAATGA ATTTGCTAATTCAATTTCGAAATTTTCTCTTTTATATGCAGACCAAAACGAATCAGATTATAATAAAATGGTTAAAGCAG TAAAAGAAGGCAGACTGCCAATTGCTGCAGAAATATAA
Upstream 100 bases:
>100_bases AAACCGTCTAATAAAAAAATAGGAACTCACATCTTAATTAAAGATATGACATATTCCATGGAAAATTAGAGACGTGACAG AAGTAAAATAAATCATTCCT
Downstream 100 bases:
>100_bases ATTTTAGTAATTAAAAAATACATCATGTAGCTCTGCAAAGTAAAAAAGAATCTGCTGTTTTATTTGAAATGAAAGAAAAA AGCCTAAAAATAAATAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MTEKTDNNEILFDPTASKTERYEKGRAIRKIVPRSSHQQYVPSENREDPVDILIRTSIGRIESLLPIRYTRMMESPFAFF RGAAAIMTADLEQTPNTGIDLQLCGDCHLMNFGGFATPERKLVFDINDFDETFPGPWEWDVKRLAASFVIAGKWRKFSKK NCKEFAWNVADSYKRHMLDYSKLSALQIWYADIDLAELIELGKDEEIKEFHQKRIKKAAEYTAHEKEFAKMTYRDGVRAR IKDEPPLIYHPSGNEEDQILKEAEIVHKRYLKSLPEDKQVLLSRYSMHDFAIKVVGVGSVGTLCGISLLMSATGEPIFLQ FKEARKSVLEQHVKVKAKYTHQGERIVIGQKLMQSASDMFLGWTNDDKGRFFYIRQLRDAKVKPVLEIMKEENMIDYAKA CGWALARAHARSGDPSMLSGYIGDSNEFANSISKFSLLYADQNESDYNKMVKAVKEGRLPIAAEI
Sequences:
>Translated_465_residues MTEKTDNNEILFDPTASKTERYEKGRAIRKIVPRSSHQQYVPSENREDPVDILIRTSIGRIESLLPIRYTRMMESPFAFF RGAAAIMTADLEQTPNTGIDLQLCGDCHLMNFGGFATPERKLVFDINDFDETFPGPWEWDVKRLAASFVIAGKWRKFSKK NCKEFAWNVADSYKRHMLDYSKLSALQIWYADIDLAELIELGKDEEIKEFHQKRIKKAAEYTAHEKEFAKMTYRDGVRAR IKDEPPLIYHPSGNEEDQILKEAEIVHKRYLKSLPEDKQVLLSRYSMHDFAIKVVGVGSVGTLCGISLLMSATGEPIFLQ FKEARKSVLEQHVKVKAKYTHQGERIVIGQKLMQSASDMFLGWTNDDKGRFFYIRQLRDAKVKPVLEIMKEENMIDYAKA CGWALARAHARSGDPSMLSGYIGDSNEFANSISKFSLLYADQNESDYNKMVKAVKEGRLPIAAEI >Mature_464_residues TEKTDNNEILFDPTASKTERYEKGRAIRKIVPRSSHQQYVPSENREDPVDILIRTSIGRIESLLPIRYTRMMESPFAFFR GAAAIMTADLEQTPNTGIDLQLCGDCHLMNFGGFATPERKLVFDINDFDETFPGPWEWDVKRLAASFVIAGKWRKFSKKN CKEFAWNVADSYKRHMLDYSKLSALQIWYADIDLAELIELGKDEEIKEFHQKRIKKAAEYTAHEKEFAKMTYRDGVRARI KDEPPLIYHPSGNEEDQILKEAEIVHKRYLKSLPEDKQVLLSRYSMHDFAIKVVGVGSVGTLCGISLLMSATGEPIFLQF KEARKSVLEQHVKVKAKYTHQGERIVIGQKLMQSASDMFLGWTNDDKGRFFYIRQLRDAKVKPVLEIMKEENMIDYAKAC GWALARAHARSGDPSMLSGYIGDSNEFANSISKFSLLYADQNESDYNKMVKAVKEGRLPIAAEI
Specific function: Unknown
COG id: COG4320
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53271; Mature: 53139
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKTDNNEILFDPTASKTERYEKGRAIRKIVPRSSHQQYVPSENREDPVDILIRTSIGR CCCCCCCCEEEECCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHEEEECCHHH IESLLPIRYTRMMESPFAFFRGAAAIMTADLEQTPNTGIDLQLCGDCHLMNFGGFATPER HHHHHHHHHHHHHHCHHHHHHCCHHHEEECHHCCCCCCCEEEECCCEEEECCCCCCCCCC KLVFDINDFDETFPGPWEWDVKRLAASFVIAGKWRKFSKKNCKEFAWNVADSYKRHMLDY EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKLSALQIWYADIDLAELIELGKDEEIKEFHQKRIKKAAEYTAHEKEFAKMTYRDGVRAR HHHHEEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE IKDEPPLIYHPSGNEEDQILKEAEIVHKRYLKSLPEDKQVLLSRYSMHDFAIKVVGVGSV ECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEEEECCCH GTLCGISLLMSATGEPIFLQFKEARKSVLEQHVKVKAKYTHQGERIVIGQKLMQSASDMF HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHEEEEECCCCCEEEECHHHHHHHCCEE LGWTNDDKGRFFYIRQLRDAKVKPVLEIMKEENMIDYAKACGWALARAHARSGDPSMLSG EEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHCC YIGDSNEFANSISKFSLLYADQNESDYNKMVKAVKEGRLPIAAEI CCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure TEKTDNNEILFDPTASKTERYEKGRAIRKIVPRSSHQQYVPSENREDPVDILIRTSIGR CCCCCCCEEEECCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHEEEECCHHH IESLLPIRYTRMMESPFAFFRGAAAIMTADLEQTPNTGIDLQLCGDCHLMNFGGFATPER HHHHHHHHHHHHHHCHHHHHHCCHHHEEECHHCCCCCCCEEEECCCEEEECCCCCCCCCC KLVFDINDFDETFPGPWEWDVKRLAASFVIAGKWRKFSKKNCKEFAWNVADSYKRHMLDY EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKLSALQIWYADIDLAELIELGKDEEIKEFHQKRIKKAAEYTAHEKEFAKMTYRDGVRAR HHHHEEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE IKDEPPLIYHPSGNEEDQILKEAEIVHKRYLKSLPEDKQVLLSRYSMHDFAIKVVGVGSV ECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEEEECCCH GTLCGISLLMSATGEPIFLQFKEARKSVLEQHVKVKAKYTHQGERIVIGQKLMQSASDMF HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHEEEEECCCCCEEEECHHHHHHHCCEE LGWTNDDKGRFFYIRQLRDAKVKPVLEIMKEENMIDYAKACGWALARAHARSGDPSMLSG EEECCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHCC YIGDSNEFANSISKFSLLYADQNESDYNKMVKAVKEGRLPIAAEI CCCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA